EY728457

Overview
NameEY728457
Unique NameEY728457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_USTMA (Nascent polypeptide-associated complex subunit alpha OS=Ustilago maydis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.546e-20
Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 3
Query:  222 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQF---KAPDLSHVVSKPESSAMA----------QDDEEVDETGVEPKDIELVMTQAGVSRGK 557
            A+  +G+K + G++RVT+++ +  L+VI++P+V+KS  +D Y++FGEAK ED+S   Q QAA+Q    +A +     S   SSA             DD  +DE GV+ KDI+LVM Q   SR K
Sbjct:   46 ALQGIGLKKVGGITRVTMRRPRGHLYVIAQPEVYKSSHSDVYIVFGEAKAEDMSQLAQAQAAQQMAQAEAQERLLAESLQNSSASGAEKKVEEEEEDDDSPIDEEGVDAKDIDLVMQQVSCSRRK 170          

HSP 2 Score: 30.0314 bits (66), Expect = 3.546e-20
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIM 609
            KAV+ALK +NGDL++AIM
Sbjct:  170 KAVKALKESNGDLINAIM 187          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.079e-18
Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSK------PESSAMAQDD----------------EEVDETGVEPKDIELVMTQAGVSR 551
            KLGMKP+ GV++V +KKSK I FV++KPDV+K P +DTYVIFGEAK+ED+S     +AA++     LS  +         +SSA A                    + DE+ V   DI+LV++Q G +R
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQRLS--QLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTR 174          

HSP 2 Score: 23.8682 bits (50), Expect = 1.079e-18
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            +AVEAL    GD+V  IM+L+
Sbjct:  176 QAVEALIKNKGDIVETIMQLS 196          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.833e-18
Identity = 57/134 (42.54%), Postives = 72/134 (53.73%), Query Frame = 3
Query:  225 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFK-----APDLSHVVSKPESSAMAQ------------------DDEEVDETGVEPKDIELVMTQAGVSRGK 557
            +LKLG+KPI GVSRVT KK    +F I +P+V+KS     +V+FGEAK++D + +L  +A E  +      P     VSK   S  A                   DD EVDETG+   DIELVM QAGV R K
Sbjct:   24 ILKLGLKPIQGVSRVTFKKKDGQIFAIDRPEVYKS-QGGNFVVFGEAKVDDFTQRL-AKAQESLQQNEGVLPAGQDAVSKDPQSIQADMQAAADSATDKPSADDAVDDAEVDETGLNADDIELVMQQAGVPRAK 155          

HSP 2 Score: 27.7202 bits (60), Expect = 1.833e-18
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 1
Query:  547 PGAKAVEALKAANGDLVSAIMELT 618
            P AKA +ALK  + D+V+AIM L+
Sbjct:  152 PRAKAAKALKEHDSDIVNAIMALS 175          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_CANAL (Nascent polypeptide-associated complex subunit alpha OS=Candida albicans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.833e-18
Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQ-------------LQTQAAEQFKAPDLSH--VVSKPESSAMA--------QDDEEVDETGVEPKDIELVMTQAGVSRGK 557
            KL +K I G+SRVT K+  N+++ I  PDV++S    TYV+FGEAK++D++ +             LQ  AA+  K  D S   + +  E +++         +D+ E+DETG++PKDIE+V+ Q  VSR K
Sbjct:   28 KLNLKQIKGISRVTFKQRGNLIYAIDSPDVYRS-AAGTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGKTEDKSPEAITADLEKASLGDKKAEDEEEDEGEIDETGLDPKDIEIVVEQTQVSRAK 158          

HSP 2 Score: 29.261 bits (64), Expect = 1.833e-18
Identity = 13/22 (59.09%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  553 AKAVEALKAANGDLVSAIMELT 618
            AKAV+AL+  +GD+V+AIM+L+
Sbjct:  157 AKAVKALRNHDGDMVNAIMDLS 178          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_SCHPO (Nascent polypeptide-associated complex subunit alpha OS=Schizosaccharomyces pombe GN=egd2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.835e-18
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQ------------DDEEVDETGVEPKDIELVMTQAGVSRGK 557
            KLG+K + G++RV +++ KNIL +I++P V+KS + + Y++ G+  +ED+++Q +     Q +A +     +  E S  AQ             ++ VDETGV+ KDIELVM QA VSR K
Sbjct:   33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNESQKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELVMAQANVSRAK 152          

HSP 2 Score: 30.0314 bits (66), Expect = 1.835e-18
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  553 AKAVEALKAANGDLVSAIMELT 618
            AKAV ALK  N D+V+AIM LT
Sbjct:  151 AKAVTALKENNSDVVNAIMSLT 172          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_ASHGO (Nascent polypeptide-associated complex subunit alpha OS=Ashbya gossypii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.838e-18
Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAP-----DLSHVVSKPES----SAMAQDDE--EVDETGVEPKDIELVMTQAGVSRGK 557
            K  MKP+PG++RVT +K  N +F I  PDV+K+     YV+FGE K++D + +L   Q QAA   K P     D++   + P +    +A  ++DE  +VDE+G++ +DIELVM QA VSR K
Sbjct:   26 KFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKT-QGGNYVVFGEPKVDDFTRRLARAQQQAASAAKDPQSIQADMAAAAAAPAAPAAPAAAPEEDEAGQVDESGLDGQDIELVMQQANVSRNK 147          

HSP 2 Score: 26.9498 bits (58), Expect = 1.838e-18
Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            KAV+AL+  N D+V+AIM L+
Sbjct:  147 KAVKALREHNSDIVNAIMSLS 167          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_LODEL (Nascent polypeptide-associated complex subunit alpha OS=Lodderomyces elongisporus GN=EGD2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.381e-18
Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVS---------KPES-----------------SAMAQDDEEVDETGVEPKDIELVMTQAGVSRG 554
            KLG+K I G+SRVT K+  N+++ I  P+V++S    TYV+FGEAK++D++ ++    A+Q +   L    +          PE+                  A   D+EEVDETG+ PKDI+L++ Q  VSRG
Sbjct:   29 KLGLKQIKGISRVTFKQRGNLIYAIDAPEVYRSQA-GTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGAAGDDKSPEAITADLEKASLQGGESNADAAEDDNEEVDETGINPKDIDLIVEQTRVSRG 161          

HSP 2 Score: 27.7202 bits (60), Expect = 2.381e-18
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 1
Query:  559 AVEALKAANGDLVSAIMELT 618
            AV+ALK  +GD+V+A+MEL+
Sbjct:  163 AVKALKKHDGDMVNALMELS 182          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.603e-17
Identity = 40/120 (33.33%), Postives = 71/120 (59.17%), Query Frame = 3
Query:  222 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDEEV--------DETGVEPKDIELVMTQAGVSRGK 557
            AM KLG+ P+  + RVT+K+ + +L V+++P+V+ SP+ +TYV+FG+   +D++S+LQ    +      +   +  P +   +++ EE+        D  GV PKD+E+VM +   SR K
Sbjct:   19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREK 138          

HSP 2 Score: 27.7202 bits (60), Expect = 5.603e-17
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            K VE L A   DLVSA++ELT
Sbjct:  138 KVVETLIATKNDLVSAVLELT 158          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_DEBHA (Nascent polypeptide-associated complex subunit alpha OS=Debaryomyces hansenii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.235e-17
Identity = 45/134 (33.58%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVV---------SKPESSAMAQ----------------DDEEVDETGVEPKDIELVMTQAGVSRGK 557
            KL +K I G++RVT K+  N+++ I +PDVF+S +  TYV+FGEAK++D++ ++     +Q +   LS             K + +  A                 DD EVDE+G++ KDI++++ Q  VSR K
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDQPDVFRS-SAGTYVVFGEAKVDDMNKRIAEAQQQQAQQDALSKAAGETGEAGEEDKSQDAITADLEKASLNTNKIEEEEADDGEVDESGLDAKDIDIIVEQTQVSRAK 160          

HSP 2 Score: 31.187 bits (69), Expect = 7.235e-17
Identity = 14/22 (63.64%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  553 AKAVEALKAANGDLVSAIMELT 618
            AKAV+AL+  +GD+V+AIMEL+
Sbjct:  159 AKAVKALRVHDGDMVNAIMELS 180          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_PICST (Nascent polypeptide-associated complex subunit alpha OS=Pichia stipitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.495e-16
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL-QTQAA----------------EQFKAPDL----SHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRGK 557
            KL +K I G++RVT K+  N+++ I  PDV++S    TYV+FGEAK++D++ ++   QAA                E+ K+P+         S  E     +++ EVDE+G++ KDI++++ Q  VSR K
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDAPDVYRS-AAGTYVVFGEAKVDDMNQRIADAQAAQAAETDAHAGHTHSHGEEDKSPEAITADLEKASLTEKIEEEEEEGEVDESGLDAKDIDIIVEQTQVSRAK 156          

HSP 2 Score: 30.8018 bits (68), Expect = 3.495e-16
Identity = 14/22 (63.64%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  553 AKAVEALKAANGDLVSAIMELT 618
            AKAV+AL+  +GD+V+AIMEL+
Sbjct:  155 AKAVKALRKHDGDMVNAIMELS 176          
The following BLAST results are available for this feature:
BLAST of EY728457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_USTMA3.546e-2040.00Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI1.079e-1841.09Nascent polypeptide-associated complex subunit alp... [more]
NACA_KLULA1.833e-1842.54Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANAL1.833e-1837.88Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCHPO1.835e-1838.02Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASHGO1.838e-1842.28Nascent polypeptide-associated complex subunit alp... [more]
NACA_LODEL2.381e-1836.57Nascent polypeptide-associated complex subunit alp... [more]
NACA_DICDI5.603e-1733.33Nascent polypeptide-associated complex subunit alp... [more]
NACA_DEBHA7.235e-1733.58Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICST3.495e-1634.62Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-A04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728457 ID=EY728457; Name=EY728457; organism=Citrus sinensis; type=EST; length=845bp
CCACGCGTCCGACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTC
GAACAGCAAAAAATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGA
TGAAGACGAGGATGAGGATGAAGATGATGAGAAAGACGAACATGAAGCTG
ACGAGGGACACCGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGA
AGTGAAAAGAAGAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTAT
CCCTGGTGTTAGCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTG
TTATCTCAAAACCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTA
ATCTTTGGTGAGGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCA
GGCAGCAGAGCAATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAAC
CTGAGTCATCAGCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGG
GTTGAGCCTAAGGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAG
GGGCAAAGGCTGTGGAAGCGCTGAAGGCTGCAAATGGGGACCTAGTTTCA
GCTATCATGGAGCTTACCAACTGGAGAGTTTCCTTAGATGGTTGGTGGTG
GATTAATAAACCCTTCCTATATTTTCCGGGTCAGGTGTCGTCTAACTCGC
CCCCTCTCTCCTCGCCCCCGCGGTTGGAAGGGTTCTGCCCTCCGCTTGGN
NGGGNTNAGCCAANNNCCCNNGGGNGGGGGGGCTTTTTGGAGGAGGAAAG
GGGAGGGGAGTTTTCCTCCGGGAAGGCGGGTTTTCTCCTACGCGG
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