EY728457

Overview
NameEY728457
Unique NameEY728457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.939e-16
Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  222 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKA----------------------PDLSHVVSKPESSAMAQDDEEVDETG-----VEPKDIELVMTQAGVSRGK 557
            A+  LG+K + G+ RVT+++++N+L V+S P+V+KSP +D Y++FGEAK+ED +S  Q QA  Q  A                       +L       +SSA A   E  D +      V  ++I+L++ Q GV   K
Sbjct:   33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNSAAQLQAQAQLAASSQAAQQAHAHGGFKEGVPKSLEELMQDAPSTDSSAPAPSGEATDASASGDFKVSDEEIQLIVAQTGVDEAK 171          

HSP 2 Score: 25.0238 bits (53), Expect = 9.939e-16
Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  553 AKAVEALKAANGDLVSAIMEL 615
            AKA EA  +  GDL++AIM+L
Sbjct:  170 AKAREAYISEKGDLINAIMKL 190          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.691e-15
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---------------QTQAAEQFKAPDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRGK 557
            KLG+K I G++RVT +K  N +F I  P+V++S     YV+FGEAKI++ S +L               + Q   Q  A       +KP ++A   D+  VD   +  +DIELV +QA VS+ K
Sbjct:   26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRS-QGGNYVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNK 148          

HSP 2 Score: 29.6462 bits (65), Expect = 1.691e-15
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            KA++ALK  NGD+V+AIM L+
Sbjct:  148 KAIKALKEHNGDIVNAIMALS 168          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_YEAST (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae GN=EGD2 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 3.705e-15
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSK-PE--------------SSAMAQDDE--EVDETGVEPKDIELVMTQAGVSRGK 557
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     YV+FGEAK+++ + +L   Q QA      P    V +K PE              ++A  +DDE  EVD   +   DIELV+ Q  VS+ +
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQ 153          

HSP 2 Score: 31.187 bits (69), Expect = 3.705e-15
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            +A++ALKA NGDLV+AIM L+
Sbjct:  153 QAIKALKAHNGDLVNAIMSLS 173          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_YEAS7 (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.705e-15
Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSK-PE--------------SSAMAQDDE--EVDETGVEPKDIELVMTQAGVSRGK 557
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     YV+FGEAK+++ + +L   Q QA      P    V +K PE              ++A  +DDE  EVD   +   DIELV+ Q  VS+ +
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQ 153          

HSP 2 Score: 31.187 bits (69), Expect = 3.705e-15
Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            +A++ALKA NGDLV+AIM L+
Sbjct:  153 QAIKALKAHNGDLVNAIMSLS 173          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_YARLI (Nascent polypeptide-associated complex subunit alpha OS=Yarrowia lipolytica GN=EGD2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 47/139 (33.81%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDL----------SSQLQTQAAE---------------QFKAPDLSHVVSKPESSAM-----AQDDEEVDETGVEPKDIELVMTQAGVSRGK 557
            KL ++ + G++RV +K+++  +FVI+ P+V+K+PT ++YV+FGEA+ ED+          ++Q Q  AAE               +  + D + + +  E++++     A+D+ E D TG+E  DI+LVM QA VSR K
Sbjct:   39 KLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDMQATARAAQIAAAQAQQAAAETGSVSEAAAAGEVGAELASKDPASITADLEAASLSKDEDAEDEAEADATGLEDSDIKLVMEQANVSRNK 177          
BLAST of EY728457 vs. ExPASy Swiss-Prot
Match: NACA_CANGA (Nascent polypeptide-associated complex subunit alpha OS=Candida glabrata GN=EGD2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.378e-14
Identity = 41/120 (34.17%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  231 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSKPESSAMAQD--------DEEVDETGVEPKDIELVMTQAGVSRGK 557
            KLG+K +PG+ RVT +K  N +F I KP+VF+S     YV+FGEAK+++ + +L   Q QA  Q        + +  +++A+A +        +E+VD   +   DI+LV+ Q   ++G+
Sbjct:   26 KLGLKKVPGIIRVTFRKKDNQIFAIEKPEVFRS-VGGNYVVFGEAKVDNFTQRLAAAQQQAQSQTATKTPEDIQADMQAAAVANENKTEGDAAEEDVDAGDLSNDDIDLVVQQTNATKGQ 144          

HSP 2 Score: 28.4906 bits (62), Expect = 1.378e-14
Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1
Query:  556 KAVEALKAANGDLVSAIMELT 618
            +A++ALK  NGD+V+AIM L+
Sbjct:  144 QAIKALKEHNGDIVNAIMSLS 164          
The following BLAST results are available for this feature:
BLAST of EY728457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_CRYNE9.939e-1633.09Nascent polypeptide-associated complex subunit alp... [more]
NACA_VANPO1.691e-1536.29Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAST3.705e-1537.98Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAS73.705e-1537.98Nascent polypeptide-associated complex subunit alp... [more]
NACA_YARLI7.674e-1533.81Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANGA1.378e-1434.17Nascent polypeptide-associated complex subunit alp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-A04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728457 ID=EY728457; Name=EY728457; organism=Citrus sinensis; type=EST; length=845bp
CCACGCGTCCGACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTC
GAACAGCAAAAAATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGA
TGAAGACGAGGATGAGGATGAAGATGATGAGAAAGACGAACATGAAGCTG
ACGAGGGACACCGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGA
AGTGAAAAGAAGAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTAT
CCCTGGTGTTAGCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTG
TTATCTCAAAACCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTA
ATCTTTGGTGAGGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCA
GGCAGCAGAGCAATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAAC
CTGAGTCATCAGCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGG
GTTGAGCCTAAGGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAG
GGGCAAAGGCTGTGGAAGCGCTGAAGGCTGCAAATGGGGACCTAGTTTCA
GCTATCATGGAGCTTACCAACTGGAGAGTTTCCTTAGATGGTTGGTGGTG
GATTAATAAACCCTTCCTATATTTTCCGGGTCAGGTGTCGTCTAACTCGC
CCCCTCTCTCCTCGCCCCCGCGGTTGGAAGGGTTCTGCCCTCCGCTTGGN
NGGGNTNAGCCAANNNCCCNNGGGNGGGGGGGCTTTTTGGAGGAGGAAAG
GGGAGGGGAGTTTTCCTCCGGGAAGGCGGGTTTTCTCCTACGCGG
back to top