EY728456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2) HSP 1 Score: 387.882 bits (995), Expect = 4.275e-107 Identity = 194/295 (65.76%), Postives = 231/295 (78.31%), Query Frame = 1 Query: 16 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIY-RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVRYYL 891 E+KV D+ E+VRFFHC+KRGVDRVF+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YGEDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P Y + +A ++ +L AE GLPVDR IP+I FIGRL+ +K +AAAIP + QE+V+ L Sbjct: 140 EIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVL 434
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 4.275e-107 Identity = 194/295 (65.76%), Postives = 231/295 (78.31%), Query Frame = 1 Query: 16 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIY-RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVRYYL 891 E+KV D+ E+VRFFHC+KRGVDRVF+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQAALEAPRILNLN+N YF G YGEDVVFV NDWHT + YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +F+SSFDFIDGY+ PV GRKINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P Y + +A ++ +L AE GLPVDR IP+I FIGRL+ +K +AAAIP + QE+V+ L Sbjct: 140 EIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVL 434
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 4.726e-106 Identity = 194/295 (65.76%), Postives = 229/295 (77.63%), Query Frame = 1 Query: 16 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIY-RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVRYYL 891 E+KV D+ E+VRFFHC+KRGVDRVF+DHP FL KVWGKT KIYGP TG DY+DNQ+RFSLLCQ EAPRILNLN+N YF G YGEDVVFV NDWHT +P YLK Y+P G+Y++AKV FCIHNI+YQGRFAFED+ LNL +FKSSFDFIDGY+ PV GRKINWMKAGILESD VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P Y + +A ++ +L AE GLPVDR +P+I FIGRL+ +K +AAAIP + QENV+ L Sbjct: 140 EIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQ---EAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLPSYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFKSSFDFIDGYDTPVEGRKINWMKAGILESDRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITTKYDATTAIEAKALNKEALQAEAGLPVDRKVPLIAFIGRLEEQKGPDVMAAAIPELMQENVQIVL 431
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 377.867 bits (969), Expect = 4.424e-104 Identity = 193/310 (62.26%), Postives = 237/310 (76.45%), Query Frame = 1 Query: 16 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPY-----------GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVXEWNP----*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP--IHQENVRYYL 891 E+KV D+ E+VR+FHC+KRGVDRVFVDHP FL KV GKT+ KIYGP G DY+DNQ RFSLLCQAALE PRIL+LN+N +FSGPY GEDVVFV NDWHT L+ CYLK+ Y+ G+Y++AKV FCIHNI+YQGRF+F+DF LNLP +FKSSFDFIDGY+KPV GRKINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P LT+ L +A ++ +L AEVGLPVDR +P++ FIGRL+ +K + AAIP + +E+V+ L Sbjct: 134 EIKVVDRYERVRYFHCYKRGVDRVFVDHPCFLEKVRGKTKEKIYGPDAGTDYEDNQQRFSLLCQAALEVPRILDLNNNPHFSGPYAMLCRAVPRRAGEDVVFVCNDWHTGLLACYLKSNYQSNGIYRTAKVAFCIHNISYQGRFSFDDFAQLNLPDRFKSSFDFIDGYDKPVEGRKINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPIKDKFLTVNYDVTTALE---GKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEIVKEEDVQIVL 440
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.891e-103 Identity = 188/296 (63.51%), Postives = 227/296 (76.69%), Query Frame = 1 Query: 7 VRIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK-GIVNGMDVXEWNP*LTIY-RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKVK--YLAAAIPIHQENVR 882 V +E+ VGD+ E VRFFHC+KRGVDRVFVDHP FL KVWGKT SK+YGP TG D++DNQLRF LLC AALEAPR+LNLN+++YFSGPYGE+VVFVANDWHT+++PCYLK+MYK G+Y++AKV FCIHNIAYQGRF DF LLNLP F SFDF+DG+ KPV GRKINWMKAGI E D+VLTVSPHY +EL SG +KGVELD ++R ++ GIVNGMDV +WNP Y + A ++ L AEVGL VD +IPVI FIGRL+ +K +AA+ +ENV+ Sbjct: 92 VLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETGIVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLEEQKGSDILIAASPEFVEENVQ 387
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 3.450e-40 Identity = 106/297 (35.69%), Postives = 168/297 (56.57%), Query Frame = 1 Query: 43 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGC--EASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVRY-YLGHG 900 +V FFH ++ VD VFVDHP + +YG G + DNQ R++LLC AA EAP IL L Y YG++ +FV NDWH SL+P L Y+P G+Y+ ++ IHN+A+QG + L LP ++ + +++ + +G +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP T +C D +A + L E+GLPV ++P+IGFIGRL +K + + AIP + +E+V++ LG G Sbjct: 211 EVTFFHEYRDNVDWVFVDHPSY------HRPGSLYGDNFGA-FGDNQFRYTLLCYAACEAPLILELGG--YI---YGQNCMFVVNDWHASLVPVLLAAKYRPYGVYRDSRSTLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNP--TTDKCLPHHYSVDDLSGKAKCKAELQKELGLPVREDVPLIGFIGRLDYQKGIDLIKMAIPELMREDVQFVMLGSG 492
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.004e-39 Identity = 103/295 (34.92%), Postives = 166/295 (56.27%), Query Frame = 1 Query: 43 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVRY-YLGHG 900 +V FFH ++ VD VFVDHP + +YG G + DNQ R++LLC AA EAP IL L Y YG+ +FV NDWH SL+P L Y+P G+Y+ A+ V IHN+A+QG + L LP ++ + +++ + +G +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP + + +A + L E+GLP+ ++P+IGFIGRL +K + + AIP + ++N+++ LG G Sbjct: 205 EVTFFHEYRDSVDWVFVDHPSY------HRPGNLYGDNFGA-FGDNQFRYTLLCYAACEAPLILELGG--YI---YGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG 486
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.004e-39 Identity = 103/295 (34.92%), Postives = 166/295 (56.27%), Query Frame = 1 Query: 43 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFI----DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVRY-YLGHG 900 +V FFH ++ VD VFVDHP + +YG G + DNQ R++LLC AA EAP IL L Y YG+ +FV NDWH SL+P L Y+P G+Y+ A+ V IHN+A+QG + L LP ++ + +++ + +G +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP + + +A + L E+GLP+ ++P+IGFIGRL +K + + AIP + ++N+++ LG G Sbjct: 205 EVTFFHEYRDSVDWVFVDHPSY------HRPGNLYGDNFGA-FGDNQFRYTLLCYAACEAPLILELGG--YI---YGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSG 486
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.509e-38 Identity = 110/299 (36.79%), Postives = 152/299 (50.84%), Query Frame = 1 Query: 7 VRIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGC-----------EASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861 VR KV + +V +FH + GVD VF+D P ++ +S IYG D R L C+AA+E P + Y G ++VF+ANDWHT+L+P YLK Y+ G+ + V IHNIA+QGR EDF ++L + F D PV G N AG+ +D ++TVS YA EL + E G L NII ++ +GIVNG+D +WNP Y L DG + + +L E+GLPV ++P+I FIGRL +K V +A AIP Sbjct: 315 VRKRYKVAGQDMEVTYFHTYIDGVDIVFIDSP-----IFRNLESNIYGGNR----LDILRRMVLFCKAAVEVPWHVPCGGICYGDG----NLVFIANDWHTALLPVYLKAYYRDHGLMNYTRSVLVIHNIAHQGRGPVEDFNTVDLSGNYLDLFKMYD----PVGGEHFNIFAAGLKTADRIVTVSHGYAWELKTSEG-GWGLHNIINESDWKFRGIVNGVDTKDWNPQFDAY------LTSDGYTNYNLKTLQTGKRQCKAALQRELGLPVREDVPIISFIGRLDHQKGVDLIAEAIP 589
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSJ (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.397e-38 Identity = 108/293 (36.86%), Postives = 151/293 (51.54%), Query Frame = 1 Query: 7 VRIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVXEWNP*LTIY-----RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861 +R K + +V++FH GVD VF+D P F + Q IYG Q+ R L C+AA+E P + Y G ++VF+ANDWHT+L+P YLK Y+ GM + + V IHNIAYQGR ++F + LP + F D PV G N AG+ +D V+TVSP Y EL + E G L +IIR+ K GIVNG+D EWNP + ++ D + + +L E+GL V ++P+IGFIGRL +K V + A+P Sbjct: 373 IRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHR-----QDDIYGGNR----QEIMKRMILFCKAAVEVPWHVPCGGVPYGDG----NLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKMADRVVTVSPGYLWELKTTEG-GWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMP 647 The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 299
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bpback to top |