EY728456

Overview
NameEY728456
Unique NameEY728456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_NATTJ (Glycogen synthase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 82/308 (26.62%), Postives = 152/308 (49.35%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGC---EASSEGSLXAEVGLPVDRNIPVIGFIGRL-KSRKVKYLAAAIP--IHQENVRY-YLGHG 900
            I + +G + +K R    + R V   F+++ ++        +  IYG      Y D   +F    +A L+   +L+          +  D++ + NDWHT+++   LK  Y  K  Y   K +  IHN+ YQG F     EDF  L+   + +   ++++ +       +I+++K G++ SD + TVSP YA+E+ S E  G+ +D ++  R+  + GI+NG+D  ++NP   +   +   L  +G    +  ++  L  ++ LPV   +P+I FI RL K + +  +   +P  +  E V++ +LG G
Sbjct:   62 IIIPLGWRAQKSRVSSYNFRNVTFYFIENDYYF------NREDIYG------YFDEAEQFGFFSKAILDIMPLLD----------FYPDIIHL-NDWHTAMVSPLLKYKYAHKTNYNQMKTILTIHNLKYQGIFTPHVLEDFFDLH-DHKLQHDPEYLEYHG------QISFLKGGLIFSDAITTVSPTYAKEIQSPE-LGMGVDGLLHKRRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPDEGKTNEKLINKLRLQEDLRLPVSSRVPLIAFINRLVKQKGLDLITYVLPELLESEEVQFVFLGTG 338          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATO (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFTELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATH (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFTELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATF (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFTELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 71/237 (29.96%), Postives = 116/237 (48.95%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEV----GLPVDRNIPVIGFIGRL-KSRKVKYLAAAI 858
            Y DN  RF  L +AA+E P+++    +           VF A+DWHT+ +P +L T+Y+   +   A  V  +HN+ +QG F      +L +  +    F F+ G  K     + N +K G+  + ++ TVS  YA+E+ + E  G  LD ++  R   + GI+NG+D  EWNP    +       +    + S +     +V    GLP   ++P+ G +GRL K + +  LA AI
Sbjct:  112 YMDNDNRFIFLSRAAMELPKLIGFAPD-----------VFHAHDWHTAAVPVFLNTLYRDDPLVGGAASVLTVHNMQHQGNFYPGAMEVLGIGWE---HFTFL-GLEK---DNQTNLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSADLVGILNGVDYEEWNPETDPHI----VANYSRSDLSGKKLCKRDVQRFFGLPERDDVPLFGLVGRLVKQKGIDILAEAI 325          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_VIBF1 (Glycogen synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glgA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.332e-18
Identity = 69/232 (29.74%), Postives = 117/232 (50.43%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIY---RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYL 846
            Y DN  RF+    A L+  P++LN             D++ V NDWHT LIP  LK  Y     Y   + V  IHN  ++G F +++   L   ++FKS F         +    ++ +KAG+  +D +  VSP+YA+EL++     G+  D   R++ + GI+NG D  EWNP    Y   + ++  +     + + + +L  E+ LP  +++ + G + RL ++K ++YL
Sbjct:  108 YADNGERFAFFSAATLDLLPKLLNKKP----------DIIHV-NDWHTGLIPYLLKKRYVENEFYHQTRSVLSIHNAVFKGIFHYDEIACL---SEFKSHF----VPEASISHTHVSMLKAGVQCADKINAVSPNYAKELLTELGSHGMASDFQDRESDLIGILNGCDYSEWNPEKDSYIPKQFKVNRISMVRGKKACKAALQQELSLP-QKDVAMYGMVCRLTNQKGIQYL 320          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.332e-18
Identity = 81/275 (29.45%), Postives = 128/275 (46.55%), Query Frame = 1
Query:   49 RFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIPI 864
            R     K G+D   ++ P     ++ +  S   GP  G+D+ DN  RF+ L + A E  + L  +        +  D++  A+DW   L P YL+   KP+        VF +HN+A+QG+F  E    L LP     S D ++ Y        I +MK+G+  SD + TVSP YA E + G   G+ LD ++R+    + GI+NG+D   WNP           L       ++  S+     L +D +  ++G I RL  +K +  L  A+P+
Sbjct:   72 RLLAARKGGLDLFVLEAP----HLYDRPGSPYSGP-DGKDWPDNAYRFAALARTAAEIGQGLVPS--------FVPDIIH-AHDWQAGLTPAYLRYSGKPQ-----PATVFTVHNLAFQGQFPRELLATLGLPPG-AFSVDGVEYYGS------IGYMKSGLQLSDRITTVSPAYALE-IQGPQAGMGLDGLLRQRAAQLTGILNGIDDKVWNPATDKRITATYDLDHLAARRANTQSVRELFDLSLDPDRLLLGVISRLSWQKGLDLLLEALPV 319          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP5 (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.332e-18
Identity = 75/234 (32.05%), Postives = 111/234 (47.44%), Query Frame = 1
Query:  145 YGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSF--DFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y    G D+ DN  RF+ L +AA E  + L           +  D+V  A+DW   L   YL+   KP     +   VF +HN+A+QG+F  E  G L LP    SSF  D ++ Y        I +MKAG+  SD + TVSP YA E +   + G+ LD ++R+    + GI+NG+D   WNP           +       +++ +L    GL  + +  +IG I RL  +K
Sbjct:   99 YASPDGRDWPDNAQRFAALARAAAEIGQGL--------VPAFVPDIVH-AHDWQAGLTAAYLRYSDKP-----APATVFTVHNLAFQGQFPRELLGTLGLP---PSSFGVDGVEYYG------AIGYMKAGLQLSDRITTVSPAYALE-IQAPEAGMGLDGLLRQRSHHLTGILNGIDEKVWNPATDKRIAATYDVKTLPARGANKAALRERFGLASETDRLLIGVISRLSWQK 308          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_AERHH (Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.332e-18
Identity = 68/227 (29.96%), Postives = 107/227 (47.14%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKVKYL 846
            Y DN  RF+ L  AAL A   L           +  D+V   NDWHT L+P  LKT +     ++  + V  IHN A+QG F  + F  +   A ++    +  G+        +N +K G+L +D +  VSP+YA EL++     G+      R   ++GI+NG D  +W+P    +      +     +   + SL  E GLPV  ++P+ G + RL  +K  +L
Sbjct:  111 YPDNGERFAFLAAAALHASEQL----------AFAPDIVH-CNDWHTGLLPLLLKTRHAHNPFFQHTRSVISIHNAAFQGVFERQQFWAVPEIADYEQRISYDYGH--------VNLLKCGVLYADKINAVSPNYASELLTHLGAHGMASIFQQRAADLRGILNGCDYQDWDPAFDDFLPATYDVDNLAGKHICKQSLQQETGLPV-VDLPIYGMVCRLTEQKGVHL 317          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCM (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 68/230 (29.57%), Postives = 111/230 (48.26%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID-GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEG------SLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y DN  RF     A L+    L +  +           +  ANDWHT L+P  LKT Y+    ++  K V  +HN  ++G F++    +  +P    S  +F+  G++       ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP    Y   +   + D  E+  +G      +L  E+ LPV  ++P+ G + RL  +K
Sbjct:  106 YADNGERFGFFSAACLDVLPKLGIQPD-----------IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEV--IPELNLSGMEFLQYGHD------HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHY---LPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQK 312          
The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
GLGA_NATTJ3.712e-1826.62Glycogen synthase OS=Natranaerobius thermophilus (... [more]
GLGA_FRATO3.712e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATH3.712e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATF3.712e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA1_GEOSL3.712e-1829.96Glycogen synthase 1 OS=Geobacter sulfurreducens GN... [more]
GLGA_VIBF16.332e-1829.74Glycogen synthase OS=Vibrio fischeri (strain ATCC ... [more]
GLGA_RHOPB6.332e-1829.45Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOP56.332e-1832.05Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_AERHH6.332e-1829.96Glycogen synthase OS=Aeromonas hydrophila subsp. h... [more]
GLGA_VIBCM8.270e-1829.57Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCG
CTTCTTTCATTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATC
CTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAATCTATGGG
CCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTT
GTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACA
AATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGAC
TGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAA
AGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTT
ACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCT
CAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAG
AGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGG
TCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGAC
AAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTAAGGGAAT
TGTGAACGGGATGGATGTCCANGAGTGGAACCCTTGACTGACAATATATA
GGTGTCAAATATGATNGCTTCACTGTGATGGATGCGAAGCCTCTTCTGAA
GGAAGCCTCCNAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGT
CATAGGCTTCATTGGTAGACTGAAGAGCAGAAAGGTCAAATATCTTGCAG
CTGCCATCCCCATTCATCAAGAGAATGTCAGATATTATCTTGGTCATGGC
A
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