EY728456

Overview
NameEY728456
Unique NameEY728456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCH (Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 68/230 (29.57%), Postives = 111/230 (48.26%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID-GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEG------SLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y DN  RF     A L+    L +  +           +  ANDWHT L+P  LKT Y+    ++  K V  +HN  ++G F++    +  +P    S  +F+  G++       ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP    Y   +   + D  E+  +G      +L  E+ LPV  ++P+ G + RL  +K
Sbjct:  106 YADNGERFGFFSAACLDVLPKLGIQPD-----------IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEV--IPELNLSGMEFLQYGHD------HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHY---LPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQK 312          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_VIBC3 (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 68/230 (29.57%), Postives = 111/230 (48.26%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID-GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEG------SLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y DN  RF     A L+    L +  +           +  ANDWHT L+P  LKT Y+    ++  K V  +HN  ++G F++    +  +P    S  +F+  G++       ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP    Y   +   + D  E+  +G      +L  E+ LPV  ++P+ G + RL  +K
Sbjct:  106 YADNGERFGFFSAACLDVLPKLGIQPD-----------IIHANDWHTGLVPFLLKTRYRYDSFFEQVKSVLTVHNAIFKGIFSYHQLEV--IPELNLSGMEFLQYGHD------HVSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHY---LPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQK 312          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 81/258 (31.40%), Postives = 128/258 (49.61%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            GV   FVD+ ++ ++        +YG      + D+  RF+   +A L+  + L+   N           V   NDW T +IP  LK  Y  K M Y   K VF IHNIA+QG F       + LP  F   +D+    N  ++    + +MK  I  SDM+ TVS  YA+E+ + E  G  LD ++R+    ++GI+NG+D  E+NP       +   ++    +  ++ +L +E+GL V+ NIP+I  + RL S+K
Sbjct:   81 GVIYYFVDNEYYFSR------GGMYG------HYDDAERFAFFDRAVLDMIKQLDWKPN-----------VIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQGVF-----DPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDSLINKNYDVNNINDKYENKRNLQSELGLSVNENIPMIAMVTRLTSQK 307          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 71/260 (27.31%), Postives = 129/260 (49.62%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            GV   F+D+ ++  +       ++YG      + D+  RF+  C+A LE  P I            +  DV+   +DWHT ++P  L+  Y+ +  Y   + VF IHN+ +QG F     ED  LLNL  ++  + D ++ Y        +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++  R+  + GI+NG+D   +NP    +      +H    +  ++ +L  + GLP   ++P+I  + R+ ++K
Sbjct:   81 GVIYYFIDNEYYFKR------PQLYG------HYDDGERFAYFCRAVLEVLPEI-----------QFQPDVIH-CHDWHTGMVPFLLREQYRHELFYVDMRTVFTIHNLQFQGLFPRGILED--LLNLDGRY-FTVDHLEFYG------CVSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHTRERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ERWCT (Glycogen synthase OS=Erwinia carotovora subsp. atroseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 84/270 (31.11%), Postives = 121/270 (44.81%), Query Frame = 1
Query:   64 HKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL-VSGEDKGVE--LDNIIRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKVKYLA-AAIP 861
            H  GV    +D P    +++ +  S  + P     Y DN LRF+LL     E    L+          Y    +  A+DWH  L   YL    +P      AK VF +HN+AYQG FA      L+LP+      DF   Y     G +I+++KAG+  +D + TVSP YA E+ +     G+E  L     +  + GI+NG+D   WNP                 +A ++  L   +GL VD   PV   + RL S+K   +A +AIP
Sbjct:   73 HFNGVGIYLIDVP----ELYERAGSPYHDPALYA-YADNYLRFALLGWMGCEMACGLD---------HYWRPDIVHAHDWHAGLTCAYLAARNRP------AKSVFTVHNLAYQGLFAAGHMANLHLPS------DFFQVYGLEFYG-QISYLKAGLFYADHITTVSPTYAHEITLPAYGYGMEGLLKTREEEGRLSGILNGVDETIWNPTHDPLLTNHYSREALANKAENKRHLQTAMGLKVDDKAPVFAIVSRLTSQKGLDIALSAIP 315          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBA (Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 80/258 (31.01%), Postives = 128/258 (49.61%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            GV   FVD+ ++ ++        +YG      + D+  RF+   +A L+  + L+   N           +   NDW T +IP  LK  Y  K M Y   K VF IHNIA+QG F       + LP  F   +D+    N  ++    + +MK  I  SDM+ TVS  YA+E+ + E  G  LD ++R+    ++GI+NG+D  E+NP       +   ++    +  ++ +L +E+GL V+ NIP+I  + RL S+K
Sbjct:   81 GVIYYFVDNEYYFSR------GGMYG------HYDDAERFAFFDRAVLDMIKQLDWKPN-----------IIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQGVF-----DPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDNLINKNYDVNNINDKYENKRNLQSELGLNVNENIPIIAMVTRLTSQK 307          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.080e-17
Identity = 71/260 (27.31%), Postives = 129/260 (49.62%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            GV   F+D+ ++  +       ++YG      + D+  RF+  C+A LE  P I            +  DV+   +DWHT ++P  L+  Y+ +  Y   + VF IHN+ +QG F     ED  LLNL  ++  + D ++ Y        +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++  R+  + GI+NG+D   +NP    +      +H    +  ++ +L  + GLP   ++P+I  + R+ ++K
Sbjct:   81 GVIYYFIDNEYYFKR------PQLYG------HYDDGERFAYFCRAVLEVLPEI-----------QFQPDVIH-CHDWHTGMVPFLLREQYRHELFYVDMRTVFTIHNLQFQGLFPRGILED--LLNLDGRY-FTVDHLEFYG------CVSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHTRERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_MARAV (Glycogen synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.411e-17
Identity = 74/233 (31.76%), Postives = 115/233 (49.36%), Query Frame = 1
Query:  145 YGPRTGEDYQDNQLRFSLLCQ-AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y    GED+ DN  RF L  +  A+ A   L L         +  D+V   NDW ++LIP +L           + K VF IHN+AYQG F+ E F  L LP      ++F++ +       +++++K G++ SD + TVSP YA E +     G  LD ++R   + + GI+NG+D  +WNP    +            ++  +  L  E+GL V    P++GF+GRL  +K
Sbjct:  101 YQNEEGEDWWDNAHRFHLFGRIGAMLALGQLGL--------AWRPDIVH-CNDWQSALIPVFLADSQD------APKTVFTIHNLAYQGLFSHETFRALGLPDSL-WRYEFLEFHG------QLSFIKGGLVFSDAITTVSPSYADE-IQTPWFGNGLDGLLRHKSSRLHGILNGIDTRQWNPEADPHLEFHYGADYPANKSQCQARLQQELGLEV-CGAPLLGFVGRLVEQK 309          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_DECAR (Glycogen synthase OS=Dechloromonas aromatica (strain RCB) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.411e-17
Identity = 73/232 (31.47%), Postives = 113/232 (48.71%), Query Frame = 1
Query:  145 YGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y   TG D+ DN LRF LL + A    +  +  S       +  D+V  ANDW T+L P YL            A  V  +HNIA+QG F  E    L LP +    FD ++ ++      +++++KAG+  +  + TVSP YA+E +  E  G  L  ++  R   ++GI+NG+D   WNP            +    + +++ +L  E+GL V  + P+ G I RL S+K
Sbjct:  101 YLDATGRDWPDNALRFGLLSRVAARLGQPDSPLS-------WQPDIVH-ANDWQTALAPAYLHYQ-------GGAASVVTVHNIAFQGCFGREMLAALGLP-EHAWRFDGVEYHD------QLSFLKAGLQLASQISTVSPTYARE-IQDEHFGYGLAPLLRHRSAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMGLEVTADRPLFGVISRLTSQK 309          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_CLOAB (Glycogen synthase OS=Clostridium acetobutylicum GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.411e-17
Identity = 80/270 (29.63%), Postives = 119/270 (44.07%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG---LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*L-----------TIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            GV   F+D+ ++  +      S +YG      Y D+  RF+   +  L+A   +           +  D++   NDW T++IP  LK  Y+    Y   K +F IHN+ YQG F     G    LN     +++  F DG         I++MK GIL SD + TVS  YA+E +     G  LD ++R     + GIVNG+D    NP             T+Y            +  ++  L   + LPV  NIP+IG + RL S+K
Sbjct:   81 GVPFYFIDNDYYFKR------SGLYG------YYDDGERFAYFSRGVLQAITYMQ---------DFNPDII-QCNDWQTAIIPVLLKDHYRNYRNYNHIKTIFTIHNLKYQGVFGKSVLGELLCLNEGYYNENALKFYDG---------ISFMKGGILFSDKLSTVSRTYAEE-IKDPYYGEHLDGLLRSRSYDLWGIVNGIDYDILNPETDKDLFFNFDSSTLYN-----------KTKNKIELQKMLNLPVSENIPMIGIVSRLVSQK 307          
The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
GLGA_VIBCH8.270e-1829.57Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 ... [more]
GLGA_VIBC38.270e-1829.57Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]
GLGA_CLOBB8.270e-1831.40Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_GEOTN1.080e-1727.31Glycogen synthase OS=Geobacillus thermodenitrifica... [more]
GLGA_ERWCT1.080e-1731.11Glycogen synthase OS=Erwinia carotovora subsp. atr... [more]
GLGA_CLOBA1.080e-1731.01Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_BACST1.080e-1727.31Glycogen synthase OS=Bacillus stearothermophilus G... [more]
GLGA_MARAV1.411e-1731.76Glycogen synthase OS=Marinobacter aquaeolei (strai... [more]
GLGA_DECAR1.411e-1731.47Glycogen synthase OS=Dechloromonas aromatica (stra... [more]
GLGA_CLOAB1.411e-1729.63Glycogen synthase OS=Clostridium acetobutylicum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCG
CTTCTTTCATTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATC
CTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAATCTATGGG
CCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTT
GTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACA
AATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGAC
TGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAA
AGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTT
ACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCT
CAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAG
AGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGG
TCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGAC
AAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTAAGGGAAT
TGTGAACGGGATGGATGTCCANGAGTGGAACCCTTGACTGACAATATATA
GGTGTCAAATATGATNGCTTCACTGTGATGGATGCGAAGCCTCTTCTGAA
GGAAGCCTCCNAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGT
CATAGGCTTCATTGGTAGACTGAAGAGCAGAAAGGTCAAATATCTTGCAG
CTGCCATCCCCATTCATCAAGAGAATGTCAGATATTATCTTGGTCATGGC
A
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