EY728456

Overview
NameEY728456
Unique NameEY728456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig219 contig Csv1_Contig219:712..1615. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ANADE (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=glgA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.009e-23
Identity = 93/275 (33.82%), Postives = 135/275 (49.09%), Query Frame = 1
Query:   67 KRGVDRV-FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCE----ASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861
            KRG   V FV+HP       G     +YG   G D+ DN  RF+ L +AAL  P  L L              +   NDW   L P  L+  +        A+ VF IHN+AYQG F  +    L LP + F+  + +F D         ++++MKAG+  +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG+DV  W+P     R      H    E    A+ + +L  EVGLPV R+ P+ G + RL  +K +  +AAA+P
Sbjct:   73 KRGPAPVYFVEHPHLFGSRRG-----LYGDG-GRDHPDNAERFAFLTRAALALPGALGLRPR-----------ILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDP----ARDPHLPAHFTPGELAGKAACKAALQREVGLPVRRDAPLAGLVTRLAEQKGIDLVAAALP 316          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.317e-23
Identity = 90/271 (33.21%), Postives = 133/271 (49.08%), Query Frame = 1
Query:   67 KRGVDRV-FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQ-FK-SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861
            KRG   V FV+HP       G     +YG   G D+ DN  RF+ L +AAL  P  L L              +   NDW   L P  L+  +        A+ VF IHN+AYQG F  +    L LP + F+  + +F D         ++++MKAG+  +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG+DV  W+P    +            +A+ + +L  EVGLPV   +PV G + RL  +K +  +AAA+P
Sbjct:   73 KRGPAPVYFVEHPHLFGSRRG-----LYG-EGGRDHGDNAERFAFLTRAALALPAALGLRPR-----------ILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVFRWEAMEFFD---------QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFGAGDLTGKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALP 316          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_RHOBA (Glycogen synthase OS=Rhodopirellula baltica GN=glgA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.720e-23
Identity = 82/254 (32.28%), Postives = 126/254 (49.61%), Query Frame = 1
Query:   88 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVXEWNP*LTIY-RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            F+D P +  +        +YG   G DY DN  RF   C+AA+ A   L           Y  D+V   NDW ++L+P  L+         +    +  IHN+AYQG F F+ F    L        SF++   YN      ++N++K G++ SD+V TVSP YA E+ + E  G  LD+I++     + GI+NG+D   WNP    + +     +     +  ++ +L AEVGLP D ++P++G IGRL  +K
Sbjct:   97 FIDQPQYFRR------PSLYGDANG-DYHDNAERFIFYCRAAIIAMTRLG----------YPVDLVH-CNDWQSALVPALLRAASDNVAKTQPIATMLSIHNMAYQGNFGFDAFPWTGLSWDHFRPESFEY---YN------QLNFLKTGVVTSDVVSTVSPTYALEIQTPE-YGCGLDSILQGIPQPVAGIINGIDTNIWNPETDPHLKRNYSVVDWADAKIDNKLALQAEVGLPQDPDVPLLGLIGRLADQK 322          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.720e-23
Identity = 81/253 (32.02%), Postives = 124/253 (49.01%), Query Frame = 1
Query:   88 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            FV+H  F     G     +YG     DY DN  RF+ L +AAL  P  L L  +           +   NDW T L+P  L+  +        A+ VF IHN+AYQG F+      L LP       + +F D         ++N++KAG++ +D + TVSP YA+E+ + +  GV LD ++R     + GI+NG+DV EW+P    +            +A+ + +L  E+GLP   ++P++  IGRL  +K
Sbjct:   81 FVEHEHFFGSRRG-----LYGE--AHDYGDNAERFAYLARAALALPGALGLRPH-----------IVHLNDWQTGLVPFLLRREHARDAALAGARTVFTIHNLAYQGVFSKHVVPALGLPWDVFRYEAMEFHD---------QLNFLKAGLVFADALTTVSPTYAREIATPQG-GVGLDALLRHRARDLHGILNGIDVEEWDPATDRHLPARYSAADLSGKAACKSALQRELGLPERPDVPLVAMIGRLAEQK 305          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_CELJU (Glycogen synthase OS=Cellvibrio japonicus (strain Ueda107) GN=glgA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.006e-23
Identity = 83/250 (33.20%), Postives = 125/250 (50.00%), Query Frame = 1
Query:   91 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            VD P F A+         Y    G D+ DN LRF    +AA EA  +     N      +  D+V   NDW T LIP  L    +          +F IHN+AY+G F+++ FG LNLP  F    + ++ Y       ++++MK G+  +D + TVSP YAQE+   E  G  LD +I  R+  + GI+NG+D  EWNP    +          G +  ++ +L   +GL ++ ++P++GFIGRL  +K
Sbjct:   87 VDIPEFSARAGNP-----YCGADGNDWYDNHLRFYWFARAA-EAIALNQAGLN------WQPDIVH-CNDWQTGLIPALLSLHPERPA------TLFTIHNLAYRGLFSYQAFGELNLPPAF-WHHERLEFYG------QMSFMKGGLAFADFITTVSPSYAQEIQLPE-HGYGLDGLIRYRQESLSGILNGIDTDEWNPGKDKHLAATYNRRTLGNKTKNKLALQETLGLALNADVPLLGFIGRLVDQK 309          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.456e-22
Identity = 87/249 (34.94%), Postives = 121/249 (48.59%), Query Frame = 1
Query:  160 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV-VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGS--LXAEVGLPVDRNIPVIGFIGRLKSRKVKYLAAAIPIHQENVRYYL 891
            G D  +  + FS    A  EA ++L            GE V V   NDW T L+P YLKT+YK    +    V+  IHN+ YQG F         LP  +  + D I+ Y       KIN++K GIL SD++ TVSP YAQE +  ++ G +LD +  +R + + GI+NG+D  E+NP  T  R  +        E   E    L  E+ LP   ++PVIG I RL  +K       + I  E +RY L
Sbjct:  107 GPDLAEQAIYFSA---AVFEALKVL------------GEKVDVLHINDWQTGLVPVYLKTLYKDDEFFSKTVVLLTIHNLGYQGIFDSSYMNFSGLP-DYLYNIDGIEFYG------KINFLKGGILFSDVINTVSPTYAQE-IQTKEYGEKLDGVLRLRSSDLYGILNGIDYDEYNP-ETDKRIYV-NYSLQEIEKKYENKKMLQKELNLPQTNDVPVIGMITRLVDQK------GLDILSEVLRYIL 324          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.902e-22
Identity = 80/292 (27.40%), Postives = 144/292 (49.32%), Query Frame = 1
Query:    4 RVRIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861
            R  +++ +G  +++  F H +   +    +++  + ++        +YG  +GE Y DN LRF+  C+  L+  + ++          Y  D++   +DW T++IP  LK        +     VF IHN+AYQG F   A  D GL   P+ F  + D ++ Y       K+N +K  IL +D++ TVS  Y +E+++ E  G  LD +  +RK  + G++NG+D   WNP       +         +A+++ +L   +GL +  +IP++G + RL  +K +  L A +P
Sbjct:   58 RKSVDVMIGGSVKRGLFRHTNLEDIPVYLLENKEYFSR------DHLYGTASGE-YPDNHLRFAFFCRGVLDLLKKMD----------YRPDIIH-CHDWQTAMIPLILKKEKGDDLFFSKTGTVFTIHNLAYQGLFPKEAMVDMGL--DPSLF--TIDCLEYYG------KVNLIKGAILTADVINTVSETYCREILTPE-SGDGLDGVLTLRKNDLYGVLNGIDYEHWNPATDRGISKNFTPGAPAGKAANKKALQKRLGLEIAEDIPLVGMVSRLTEQKGLDLLEALLP 320          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.484e-22
Identity = 80/252 (31.75%), Postives = 134/252 (53.17%), Query Frame = 1
Query:  160 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP-IHQENVR-YYLGHG 900
            G+D+ DN  RF+  C+A      +  L ++  F   +  D++   NDW T LIP +L  +            +F IHN+AYQG F+ + F  L LP+ + S    ++ YN+      I+++K G++ +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG D   W+P    +  +     C   +AS++ +L    GLP D  +PV+GF+GRL  +K +  +  A+P +  E ++  +LG G
Sbjct:  105 GQDWPDNAARFTTFCRA------VATLANSPEFD--WQPDLIH-CNDWQTGLIPPFLAPLRSRPA------TLFTIHNLAYQGVFSRQQFDALELPSAWWSPAA-LEFYNQ------ISFIKGGLVFADWLTTVSPTYAKEILTPEF-GCGLDGVLRGRSKRLTGILNGADYQRWDPRHDPFIEKRYDQTCWSHKASNKLALQRRYGLPEDDTLPVLGFVGRLVEQKGIDLILGALPKLLAEKIQVVFLGEG 333          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.245e-22
Identity = 83/229 (36.24%), Postives = 118/229 (51.53%), Query Frame = 1
Query:  160 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEAS--SEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            G D  +  + FS    AA+EA         KY S  +  D+V  A+DW T L+P YLKT+Y+    +     VF IHN+ YQG F         LPA +  + D ++ Y       +IN++K GIL SD+V TVSP YAQE +  E  G +LD +  +R   + GI+NG+D  E+NP  T  R  +     D  E    ++  L  E+ L V  ++P+IG I RL  +K
Sbjct:  107 GPDLAEQSIFFS---NAAIEAM--------KYLSETF--DIVH-AHDWQTGLVPVYLKTLYRTDPFFNRTATVFTIHNLGYQGVFNPGYMKFAGLPA-YLFNIDGLEFYG------QINFLKGGILFSDIVTTVSPTYAQE-IQTEQFGEKLDGVLRLRAEDLYGILNGIDYSEYNP-ATDKRIYV-NYDIDHIEKKKMNKSELQKELNLQVRDDVPLIGMINRLVDQK 311          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.534e-22
Identity = 79/237 (33.33%), Postives = 114/237 (48.10%), Query Frame = 1
Query:  160 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861
            G+D+ DN LRF+ L Q      + L          P+ +  V  A+DW T L+P YLK   +P       K VF IHN+A+QGRF +E  G L LP +     D I+ Y        I ++KAG+  +D + TVSP YA E + G + G+ LD +  +R   + GI+NG+D   WNP           +      A ++  L A  GL  +    + G I RL  +K +  L  A+P
Sbjct:  104 GKDWPDNGLRFAALAQVGAALGQGLL---------PHYKPDVLHAHDWQTGLLPAYLKYSGRP-----GPKTVFTIHNLAFQGRFPYELLGRLGLPER-AFGLDGIEYYG------GIGYLKAGLQLADRITTVSPSYAAE-IQGSEAGMGLDGLLQLRADRLSGILNGIDTDVWNPASDALISATYDVESIAARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLQALP 318          
The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
GLGA_ANADE1.009e-2333.82Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]
GLGA_ANAD21.317e-2333.21Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]
GLGA_RHOBA1.720e-2332.28Glycogen synthase OS=Rhodopirellula baltica GN=glg... [more]
GLGA_ANADF1.720e-2332.02Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]
GLGA_CELJU5.006e-2333.20Glycogen synthase OS=Cellvibrio japonicus (strain ... [more]
GLGA_THEAB1.456e-2234.94Glycogen synthase OS=Thermosipho africanus (strain... [more]
GLGA_GEOSF1.902e-2227.40Glycogen synthase OS=Geobacter sp. (strain FRC-32)... [more]
GLGA2_NITOC2.484e-2231.75Glycogen synthase 2 OS=Nitrosococcus oceani (strai... [more]
GLGA_THELT3.245e-2236.24Glycogen synthase OS=Thermotoga lettingae (strain ... [more]
GLGA_RHOPT5.534e-2233.33Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCG
CTTCTTTCATTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATC
CTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAATCTATGGG
CCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTT
GTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACA
AATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGAC
TGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAA
AGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTT
ACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCT
CAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAG
AGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGG
TCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGAC
AAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTAAGGGAAT
TGTGAACGGGATGGATGTCCANGAGTGGAACCCTTGACTGACAATATATA
GGTGTCAAATATGATNGCTTCACTGTGATGGATGCGAAGCCTCTTCTGAA
GGAAGCCTCCNAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGT
CATAGGCTTCATTGGTAGACTGAAGAGCAGAAAGGTCAAATATCTTGCAG
CTGCCATCCCCATTCATCAAGAGAATGTCAGATATTATCTTGGTCATGGC
A
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