EY728456

Overview
NameEY728456
Unique NameEY728456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig219 contig Csv1_Contig219:712..1615. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRZP (Glycogen synthase OS=Streptococcus pneumoniae (strain P1031) GN=glgA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 86/291 (29.55%), Postives = 140/291 (48.11%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFF---------HCHKR-----GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +E K G +IE V  F         +C  +     GV   F+D+ ++  +        +YG     D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y+    Y+  + V  IHN+ +QG+F+    G L     F   F+ + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP                 +A ++  L   VGLPV  ++P++G + RL  +K
Sbjct:   47 VEAKFGSQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFR------GHVYG-----DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGFERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQ-FGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRP7 (Glycogen synthase OS=Streptococcus pneumoniae (strain 70585) GN=glgA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 86/291 (29.55%), Postives = 140/291 (48.11%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFF---------HCHKR-----GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +E K G +IE V  F         +C  +     GV   F+D+ ++  +        +YG     D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y+    Y+  + V  IHN+ +QG+F+    G L     F   F+ + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP                 +A ++  L   VGLPV  ++P++G + RL  +K
Sbjct:   47 VEAKFGSQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFR------GHVYG-----DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGFERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQ-FGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRPI (Glycogen synthase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 86/291 (29.55%), Postives = 140/291 (48.11%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFF---------HCHKR-----GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +E K G++IE V  F         +C  +     GV   F+D+ ++  +        +YG     D+ D + RF+    AA+EA   +           +  D++ V +D+HT++IP  LK  Y+    Y+  + V  IHN+ +QG+F+    G L     F   F+ + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP                 +A ++  L   VGLPV  ++P++G + RL  +K
Sbjct:   47 VEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFR------GHVYG-----DFDDGE-RFAFFQLAAIEAMERI----------AFIPDLLHV-HDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGFERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQ-FGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_CLOB8 (Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.836e-20
Identity = 87/297 (29.29%), Postives = 144/297 (48.48%), Query Frame = 1
Query:   19 LKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRF----AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKVKYLAAAI--PIHQENVR 882
            +KVG + +    + C   GV    +D+  +  +       ++YG      + D+  RF+   +A L+  R ++          +  D++   NDW T ++P  LK  YK   M Y   K V+ IHNIA+QG F      E FG  ++     +   F DG         +++MK G+  SD++ TVS  YA E+ + E  G  LD ++R+    ++GI NG+D  E+NP    +  +   ++    +A ++  L  E+GL VD+NIP++  + RL S+K   L   I   + QENV+
Sbjct:   63 VKVGWREQFCGVWECFHNGVTYYVLDNEAYFKR------DEVYG------FYDDAERFAFFDRAVLDMLRQID----------WQPDLIH-CNDWQTGMLPVLLKFEYKRNDMFYWKMKCVYSIHNIAFQGVFDPQILPELFGF-DMELYNNTCLKFDDG---------VSYMKGGLCYSDVITTVSNTYAYEIQTPE-YGQRLDGVLRERSYALRGITNGIDYDEFNPKTDKFIKKNYSINSIEDKAINKTELQKELGLTVDKNIPMLAMVTRLTSQKGMDLLVNISDKLLQENVQ 325          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRU0 (Glycogen synthase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.154e-19
Identity = 81/234 (34.62%), Postives = 119/234 (50.85%), Query Frame = 1
Query:  142 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            IYG     D+ D + RF+    AALEA   +N          +  DV+ V +D+HT++IP  LK  Y     Y+  + VF IHNI +QG+F     G L     F    + + DG  +      +NWMKAG+L +D V TVSP YA E +     G  LD ++R     + GIVNG+D   +NP    +      ++    +A ++  L  ++GLPV+ NIP+IG + RL  +K
Sbjct:   98 IYG-----DWDDGE-RFAYFQLAALEAMEKIN----------FIPDVLHV-HDYHTAMIPFLLKEKYHWIQAYQKIRTVFTIHNIEFQGQFGPGMLGDL-----FGVGLERYEDGTLR--WNNCLNWMKAGVLYADRVTTVSPSYANE-IQTVAFGKGLDQVMRMESGKLSGIVNGIDTELYNPENDPHVTFPFSINDLSGKAKNKKELQEQLGLPVNENIPLIGIVSRLTDQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19
Identity = 72/226 (31.86%), Postives = 111/226 (49.12%), Query Frame = 1
Query:  163 EDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +D+ DN LRF+ L QA     + L           Y  D++  A+DW T L+P YL+   +P     + K VF IHN+AYQG+F  E    + LP +   S D ++ Y        I ++KAG+  +D + TVSP YA E + G + G+ L+ ++R     + GI+NG+D   W+P           +   G  A ++ +L A  GL  +    + G I RL  +K
Sbjct:  105 KDWPDNALRFAALAQAGAWIGQGLLPG--------YAPDILH-AHDWQTGLLPAYLRYSGRP-----APKCVFTIHNLAYQGQFPSELLARIGLPER-AFSLDGVEYYG------GIGYLKAGLQLADRITTVSPSYALE-IQGSEAGMGLEGLLRLRAGQLSGILNGVDTKVWDPSADQLIPATYDVETIGARARNKQALQARFGLRAESGALLFGVISRLSWQK 308          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_RHOFD (Glycogen synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19
Identity = 76/231 (32.90%), Postives = 114/231 (49.35%), Query Frame = 1
Query:  160 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKVKYL 846
            G+D+ DN +RF+ L  A     + L+         P+    V   +DWH+ L P Y++     K    +   VF IHN+AYQG FA  +   L LP   KS FD IDG+       K+++MKA +  +D + TVSP YA+E +S E +G  LD ++R+    + GI+NG+D   WNP            H    +  ++ +L  + GL    N  V G + RL  +K  +L
Sbjct:  111 GKDWSDNAIRFAALGWAGATLGQGLD---------PHWRPDVIHCHDWHSGLTPTYVRAFAAAK--QATPATVFTIHNLAYQGLFAAAEVTRLGLP---KSWFD-IDGFEF---FGKVSFMKAALRYADRITTVSPTYARE-ISSEAQGCGLDGLLRERANSLSGILNGVDDLIWNPATDALLPAPYDEHKLQGKTLAKRALQTKFGLEPRANALVFGAVSRLTEQKGLHL 322          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19
Identity = 77/243 (31.69%), Postives = 120/243 (49.38%), Query Frame = 1
Query:  145 YGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIPI 864
            Y    G D+ DN  RF+ LC+A     R           G +  D++  A+DW   L+P YL   Y+    + +   VF +HN+A+QG F     G L LPA   S+F  IDG         I ++KAG+  +D + TVSP YA E+ + +D G+ LD ++RK G  + GI+NG+D   WNP    +      +      A ++ ++ A +GL  D    + G + RL  +K +  +  A+P+
Sbjct:   96 YIASNGVDWSDNAQRFAALCRAGALLARGA--------VGGFVPDLLH-AHDWQAGLVPAYLH--YEG---HAAPPCVFTVHNLAFQGWFPAHLLGALGLPA---SAF-VIDGVE---YFGGIGFLKAGLQFADAITTVSPRYATEIAT-QDGGMGLDGLLRKRGSAVHGILNGLDTATWNPATDEHLAARYDVANLAARAVNKRAVQARMGLAPDPRALLFGVVSRLAGQKGIDLIIEALPV 316          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_TREDE (Glycogen synthase OS=Treponema denticola GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.968e-19
Identity = 81/255 (31.76%), Postives = 120/255 (47.06%), Query Frame = 1
Query:   88 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA---FEDFGLLNLPAQFKSSFDFIDGYNKPVRG-RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            F+DH     + +G+    +YG     D+ DN  RFSLL  AA +  R             +  DVV  A+DW   L+P  L+   K    +K+   VF IHN+ YQG ++   F D GL           D+ D Y        +IN++KA ++ SDM+ TVSP YA+E +   + G  +D I+  R+  + GI+NG+D   WNP    Y            +  ++  L    GL +D ++PV G I RL  +K
Sbjct:   86 FIDHE----QAFGR--DGVYGSAFEPDFSDNTKRFSLLAHAAFQVCR----------KQAWIPDVVH-AHDWAAGLVPVLLRFTEK-NTEFKNTASVFTIHNMGYQGVYSKHTFPDTGL-----------DWNDFYTTGFEDWDRINFLKAALVSSDMLTTVSPSYAEE-IKRPEFGFRMDGILRYREKELTGILNGVDTSIWNPSKDEYIPYRYNSKTLEEKEKNKSVLQERFGLEIDISVPVFGMISRLVDQK 310          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.358e-19
Identity = 75/270 (27.78%), Postives = 135/270 (50.00%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV--VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLH-CDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYLAAAIP 861
            GV   F+D+ ++      K    IYG      + D+  RF+   +A LE  + ++            E+V  V   +DW T ++P +L+  Y+    Y+  K VF IHN+ YQG F  E  G LL L  +  ++               +N+MKAG++ ++ + TVSP Y  E++     G  L+ ++  R   ++GI+NG+D  +++P    +  +   +   +  +A+++ +L  E+GLPV+ ++P+ GF+ RL  +K +  LA  +P
Sbjct:   81 GVTFYFIDNEYYF-----KRDGVIYG------HYDDAERFAYFSRAVLEMIQRVD-----------AEEVPDVIHCHDWQTGVLPAFLRIHYQHLNRYQEIKTVFTIHNLQYQGVFPEEVLGDLLGLSHEHFTAEGI-------AHNGLVNYMKAGLVHANQITTVSPSYRDEIMD-PYYGETLEPVLQHRAVDVRGILNGIDYRQFSPETDEHLVENYDVKTVEEGKAANKAALQQELGLPVNPDVPLFGFVSRLVDQKGIDLLAHILP 320          
The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
GLGA_STRZP6.765e-2029.55Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRP76.765e-2029.55Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPI8.836e-2029.55Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_CLOB88.836e-2029.29Glycogen synthase OS=Clostridium beijerinckii (str... [more]
GLGA_STRU01.154e-1934.62Glycogen synthase OS=Streptococcus uberis (strain ... [more]
GLGA_RHOPS1.507e-1931.86Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOFD1.507e-1932.90Glycogen synthase OS=Rhodoferax ferrireducens (str... [more]
GLGA_ACICJ1.507e-1931.69Glycogen synthase OS=Acidiphilium cryptum (strain ... [more]
GLGA_TREDE1.968e-1931.76Glycogen synthase OS=Treponema denticola GN=glgA P... [more]
GLGA_EXIS23.358e-1927.78Glycogen synthase OS=Exiguobacterium sibiricum (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCG
CTTCTTTCATTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATC
CTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAATCTATGGG
CCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTT
GTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACA
AATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGAC
TGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAA
AGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTT
ACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCT
CAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAG
AGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGG
TCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGAC
AAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTAAGGGAAT
TGTGAACGGGATGGATGTCCANGAGTGGAACCCTTGACTGACAATATATA
GGTGTCAAATATGATNGCTTCACTGTGATGGATGCGAAGCCTCTTCTGAA
GGAAGCCTCCNAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGT
CATAGGCTTCATTGGTAGACTGAAGAGCAGAAAGGTCAAATATCTTGCAG
CTGCCATCCCCATTCATCAAGAGAATGTCAGATATTATCTTGGTCATGGC
A
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