EY728456

Overview
NameEY728456
Unique NameEY728456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_BACLD (Glycogen synthase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.727e-19
Identity = 78/279 (27.96%), Postives = 130/279 (46.59%), Query Frame = 1
Query:   16 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIY-RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            E++VG + +     H    GV   F+DH ++        +  +YG      + D+  RF+   +A LEA   LN  ++           V   +DWHT ++   LK  Y+ K  Y+  K VF IHN+ +QG F   A  D   L++        +F            IN+MK GI+ +D V TVSP Y  E+++    G  L+ ++  +K  + GI+NG+D   ++P    +       ++ DG +  ++  +    GLPV+ +IP+I  + RL  +K
Sbjct:   62 EVRVGWRRQFCGIEHLEHDGVSYYFLDHGYYF------NRDSLYG------HYDDGERFAFFSRAVLEALYALNFEAD-----------VIHTHDWHTGMVNYLLKEEYRKKPFYQHMKSVFTIHNLQFQGIFPKEAVHDLLGLDISHFTTEKLEFYG---------NINYMKGGIIAADQVTTVSPTYRDEILT-PYYGERLEGVLSDKKDALTGILNGIDDVLYDPLNDPHIDYHYDAVNRDG-KRKNKAVIQKTFGLPVNEDIPLISMVARLTKQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_SULSY (Glycogen synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19
Identity = 80/233 (34.33%), Postives = 113/233 (48.50%), Query Frame = 1
Query:  142 IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +YGP  G DY DN +RF   C A +E  +  NLN           D++ V NDW T+LIP      Y    +    + V  IHN+AYQG F       LNL        + ++ Y+K      +N++K GI+ S  + TVSP YA+E+   E  G  LD ++RK   K  GI+NG+D   WNP    Y  +   +     ++ ++     EVGL  D   P+  FIGRL  +K
Sbjct:   97 LYGPPEG-DYPDNDIRFGSFCYAVMEFIKRENLNP----------DLIHV-NDWQTALIPVLNYHKYNNHHV----RTVITIHNLAYQGIFDKFAIERLNLGWDL-FHMEALEYYDK------VNFLKGGIVFSSAITTVSPTYAKEITFPE-YGYGLDGVLRKYSNKLYGILNGIDYDVWNPETDKYIYENYCVFTIQKKSINKKLFLKEVGLK-DEAKPLYIFIGRLAHQK 304          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRGC (Glycogen synthase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19
Identity = 93/304 (30.59%), Postives = 139/304 (45.72%), Query Frame = 1
Query:   16 ELKVGDKIEKVRFFHCH----------KR----GVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF----AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK-----INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEAS----SEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            + K GD++E + +F             KR    GV   F+D  H +F   V+G             D+ D + RF+    AA+E    ++          +  DV+ V +D+HT++IP  +K  Y     Y++ K V  IHN+ +QG+F     +E FG+               GY +   G       +NWMKAGIL +D V TVSP YA E+ + E  G  LD I+R    K  GIVNG+D   +NP            H D  + S    ++ +L   VGLPV  ++P++G + RL  +K
Sbjct:   48 DAKFGDQVEDLFYFEVSVGWRRQYVGVKRLVLNGVSFYFIDNQHYFFRGHVYG-------------DFDDGE-RFAYFQLAAVELMERID----------FIPDVLHV-HDYHTAMIPFLVKEKYHWIQAYRNIKTVLTIHNLEFQGQFPDSMLWELFGV---------------GYERYADGTLRWNDCLNWMKAGILYADRVTTVSPSYAGEIRTPE-FGCNLDQILRMESGKLVGIVNGIDTEIYNPETDPLLAH----HFDKSDLSGKLENKRALQERVGLPVRDDVPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_BURTA (Glycogen synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=glgA PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19
Identity = 75/226 (33.19%), Postives = 111/226 (49.12%), Query Frame = 1
Query:  166 DYQDNQLRFSLLCQ-AALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKV 837
            D+ DN  RF LLCQ AA  A     L         +  DVV  A+DWH  L+    +     +      K VF IHN A+QG FA +D   + LPA    S D ++ Y       +++++KAG   +D + TVSP YA E+ + E   G+E     R+  + GI+NG+D   WNP    +  Q   +   G +A  + +L  E+GL  D   P++  + RL S+K+
Sbjct:  103 DWADNAYRFGLLCQVAARVALGAAGLR--------WRPDVVH-AHDWHGGLVALLTRGAGDAR-----PKTVFTIHNAAFQGNFALDDAARIGLPAD-ALSVDGVEFYG------QLSFLKAGARYADRLTTVSPTYAGEIQTAEFGCGLEGLYAARRDQLSGIMNGIDTELWNPATDRWLPQPYSIDDMGGKAGCKAALQQELGLCADARAPLVASVCRLTSQKM 307          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ACTSZ (Glycogen synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19
Identity = 81/257 (31.52%), Postives = 117/257 (45.53%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            GV    +D P   A+     +   Y  +   DY DN  RF LL   A E    L+          + +  V  A+DWH  L   YL     P      AK VF IHN+AYQG+FA      L LP       D  +     + G +I+++KAG+  SDMV TVSP YA+E+ + E   G++  L  + ++  + G++NG+D   W+P    Y      L     +A ++  L     LP + N+PV   I RL  +K
Sbjct:   76 GVGVYLIDAPHLYAR-----EGNPYHDQWYNDYADNYKRFGLLGWVASELALGLDF---------WWQAEVVHAHDWHAGLASAYLAAKGHP------AKSVFTIHNLAYQGKFAARHLIELGLPV------DMFNVNGLELYG-EISYLKAGLFYSDMVTTVSPTYAKEITTTEFGYGLQGLLSTLDQQNRLAGVLNGVDDSIWHPNNDPYIHHHYKLKSMSGKAKNKALLQERFNLPQNPNVPVFVMITRLTEQK 305          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRZJ (Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 85/291 (29.21%), Postives = 139/291 (47.77%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFF---------HCHKR-----GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +E K G++IE V  F         +C  +     GV   F+D+ ++  +        +YG     D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y     Y+  + V  IHN+ +QG+F+    G L     F    + + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP                 +A ++  L   VGLPV  ++P++G + RL  +K
Sbjct:   47 VEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFR------GHVYG-----DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYCWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQ-FGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRPJ (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 85/291 (29.21%), Postives = 139/291 (47.77%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFF---------HCHKR-----GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +E K G++IE V  F         +C  +     GV   F+D+ ++  +        +YG     D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y     Y+  + V  IHN+ +QG+F+    G L     F    + + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP                 +A ++  L   VGLPV  ++P++G + RL  +K
Sbjct:   47 VEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFR------GHVYG-----DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYCWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQ-FGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_PHOPR (Glycogen synthase OS=Photobacterium profundum GN=glgA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 68/226 (30.09%), Postives = 106/226 (46.90%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIY---RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            Y DN  RF+ L  A+L+    L    +           V   NDWHT LIP  LKT Y     +  +K V  IHN  ++G F ++ + L  +P   +  +      N  +    I+ +KAG+  +D V  VSP+YA EL++     G+E D   R   + GI+NG D  +WNP   +Y   + +   +     + +    L  +V LP + ++PV G + RL  +K
Sbjct:  118 YADNGERFTFLSAASLDLCEKLGFQPD-----------VIHCNDWHTGLIPFLLKTRYAESDFFAKSKSVITIHNAVFKGVFNYDQYSL--IPELIQRRY-----INAEMDPSHISMLKAGVAYADKVNAVSPNYASELLTHLGSHGMEADFQNRAKDLYGIINGCDYDDWNPETDVYIKQKFKANKVSLARGKKACRRDLQKQVNLP-EVDVPVYGMVCRLTEQK 324          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 80/273 (29.30%), Postives = 130/273 (47.62%), Query Frame = 1
Query:   25 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            VG + +    F     GV+  F+D+ ++  +        IYG      Y D+  R++   QA +      +   +           V   ND+HT+ IP  L   +     YK  K +  IHN+ +QG++  +      LP  F  ++D+ D  +  VR    +NWMK GIL +D V TVSP YA+E+ + E  G  LD I+R    K  GI+NG+D  ++NP       +   ++    ++  + +L  E+ LP+  NIP+IG + RL ++K
Sbjct:   65 VGWRNQYCGIFTLKLNGVNYFFIDNEYYFKR------PGIYG------YYDDGERYAYFQQAVIMMMERFDFIPD-----------VLHCNDYHTAFIPFLLHEKWGFVDAYKGIKTILTIHNLEFQGKYNAK-----TLPDFFGMNYDWFD--SGIVRMDNDVNWMKTGILYADRVTTVSPSYAREIQTVE-FGQGLDAILRMCSHKLTGILNGIDFEKYNPKTDPVIKKNYDVYHLHHKSKDKIALQKELDLPIKPNIPLIGMVSRLTAQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_BACCN (Glycogen synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 82/282 (29.08%), Postives = 133/282 (47.16%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRKVKYLAAAI--PIHQENVR-YYLGHG 900
            G+    +D+ ++  +        +YG      + D+  RFS   +A LE+   L+   +   S           +DWHT+++   L   YK   +Y+  K V+ IHN+ +QG F  E    LL L  ++ +S + ++ Y        IN+MK GI+ +D + TVS  Y +E +  E  G +LD ++RK    + GIVNG+D   +NP L  Y      +     +  ++ +L    GLP   N P+I  + RL  +K   L  A+   I QE+V+   LG G
Sbjct:   81 GITYYLIDNEYYFKR------DSLYG------HYDDGERFSFFSKAILESIPYLDFEVDLIHS-----------HDWHTAMVNFLLHEKYKDNPLYEKIKTVYTIHNLQFQGVFPREVIHDLLELGDEYFNS-EQLEFYG------NINFMKGGIIAADHITTVSSTYKEE-IQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPRLDSYITATYDVDTLYAKRENKWALQHYFGLPEKENTPIISMVTRLTKQKGLDLVRAVFQEIMQEDVQCIILGSG 331          
The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
GLGA_BACLD5.727e-1927.96Glycogen synthase OS=Bacillus licheniformis (strai... [more]
GLGA_SULSY7.480e-1934.33Glycogen synthase OS=Sulfurihydrogenibium sp. (str... [more]
GLGA_STRGC7.480e-1930.59Glycogen synthase OS=Streptococcus gordonii (strai... [more]
GLGA_BURTA7.480e-1933.19Glycogen synthase OS=Burkholderia thailandensis (s... [more]
GLGA_ACTSZ7.480e-1931.52Glycogen synthase OS=Actinobacillus succinogenes (... [more]
GLGA_STRZJ9.769e-1929.21Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPJ9.769e-1929.21Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_PHOPR9.769e-1930.09Glycogen synthase OS=Photobacterium profundum GN=g... [more]
GLGA_LACAC9.769e-1929.30Glycogen synthase OS=Lactobacillus acidophilus GN=... [more]
GLGA_BACCN9.769e-1929.08Glycogen synthase OS=Bacillus cereus subsp. cytoto... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCG
CTTCTTTCATTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATC
CTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAATCTATGGG
CCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTT
GTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACA
AATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGAC
TGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAA
AGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTT
ACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCT
CAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAG
AGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGG
TCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGAC
AAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTAAGGGAAT
TGTGAACGGGATGGATGTCCANGAGTGGAACCCTTGACTGACAATATATA
GGTGTCAAATATGATNGCTTCACTGTGATGGATGCGAAGCCTCTTCTGAA
GGAAGCCTCCNAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGT
CATAGGCTTCATTGGTAGACTGAAGAGCAGAAAGGTCAAATATCTTGCAG
CTGCCATCCCCATTCATCAAGAGAATGTCAGATATTATCTTGGTCATGGC
A
back to top