EY728456

Overview
NameEY728456
Unique NameEY728456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_ANOFW (Glycogen synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glgA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.769e-19
Identity = 70/257 (27.24%), Postives = 121/257 (47.08%), Query Frame = 1
Query:   73 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFG-LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            G+   FVD+ ++  +        +YG      + D+  RFS  C+A L+   +++   N           V   +DWHT +IP  L+  Y     Y   K VF IHN+ +QG F  E  G LLNL  ++  S + ++ Y        +++MK  ++ + ++ TVSP Y +E +     G  LD ++  R + + GI+NG+D   +NP    Y      +     ++ ++ +L     LP + ++PVI  + RL  +K
Sbjct:   81 GITYYFVDNEYYFKR------DSLYG------HYDDGERFSYFCRAVLDCLPVIDFQPN-----------VIHCHDWHTGMIPFLLREEYMRNSFYAQMKTVFTIHNLQFQGIFPREILGDLLNLSDRY-FSIEHLEFYG------HVSFMKGALVSAHLITTVSPTYKEE-IQTPYYGERLDGLLRARSSHLVGILNGIDDEIYNPKKDPYIAVPYDVTTIARKSINKRALQQHFSLPSEEDVPVIAIVSRLTKQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRP4 (Glycogen synthase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.276e-18
Identity = 85/291 (29.21%), Postives = 138/291 (47.42%), Query Frame = 1
Query:   13 IELKVGDKIEKVRFF---------HCHKR-----GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            +E K G++IE V  F         +C  +     GV   F+D+ ++  +        +YG     D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y+    Y+  + V  IHN+ +QG+F+    G L     F    + + DG  +      +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP                 +A ++  L   VGLPV    P++G + RL  +K
Sbjct:   47 VEAKFGNQIEDVLHFEVSVGWRRQYCGIKKTVLNGVTFYFIDNQYYFFR------GHVYG-----DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYRWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQ-FGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGLPVRXXXPLVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.276e-18
Identity = 65/205 (31.71%), Postives = 104/205 (50.73%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+ + E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWIAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQTYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRSV (Glycogen synthase OS=Streptococcus sanguinis (strain SK36) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.666e-18
Identity = 93/302 (30.79%), Postives = 137/302 (45.36%), Query Frame = 1
Query:   22 KVGDKIEKVRFFHCH----------KR----GVDRVFVD--HPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA----FEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK-----INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEAS----SEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            K GD++E + +F             KR    GV   F+D  H +F   V+G             D+ D + RF+    AA+E    ++          +  DV+ V +D+HT++IP  +K  Y     Y++   V  IHN+ +QG+F     +E FG+               GY +   G       +NWMKAGIL +D V TVSP YA E+ + E  G  LD I+R    K  GIVNG+D   +NP            H D  + S    ++ +L   VGLPV  ++PV+G + RL  +K
Sbjct:   50 KFGDQVEDLFYFEVSVGWRRQYVGVKRLVLNGVSFYFIDNQHYFFRGHVYG-------------DFDDGE-RFAYFQLAAVELMERID----------FIPDVLHV-HDYHTAMIPFLVKEKYHWIQAYQNITTVLTIHNLEFQGQFPDSMLWELFGV---------------GYERYADGTLRWNDCLNWMKAGILYADRVTTVSPSYASEIRTPE-FGCNLDQILRMESGKLVGIVNGIDTDIYNPETDPLLAH----HFDKSDLSGKLENKRALQERVGLPVRDDVPVVGIVSRLTRQK 306          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_VIBFM (Glycogen synthase OS=Vibrio fischeri (strain MJ11) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 70/232 (30.17%), Postives = 117/232 (50.43%), Query Frame = 1
Query:  169 YQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVXEWNP*LTIY---RCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK-VKYL 846
            Y DN  RF+    A L+  P++LN             D++ V NDWHT LIP  LK  Y     Y   + V  IHN  ++G F +++   L   ++FKS F         +    ++ +KAG+  +D +  VSP+YA+EL++     G+  D   R++ + GI+NG D  EWNP    Y   + ++  +     + + + +L  EV LP  +++ + G + RL ++K ++YL
Sbjct:  108 YADNGERFAFFSAATLDLLPKLLNKKP----------DIIHV-NDWHTGLIPYLLKKRYAENEFYHQTRSVLSIHNAVFKGIFHYDEIACL---SEFKSHF----VPEASISHTHVSMLKAGVQCADKINAVSPNYAKELLTELGSHGMASDFQDRESDLIGILNGCDYSEWNPEKDSYIPKQFKVNRISMVRGKKACKAALQQEVSLP-QKDVAMYGMVCRLTNQKGIQYL 320          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATW (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATT (Glycogen synthase OS=Francisella tularensis subsp. tularensis GN=glgA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRATM (Glycogen synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_FRAT1 (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=glgA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.176e-18
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   76 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVXEWNP 684
            +D   +D P   A+         Y   + + Y DN LRF+LL   A      L+          +  ++V  ++DWH  L+P Y+K      G  K+ K VF +HN+AYQG F    F  L+LP  F  S + ++ Y       ++++MKAG+  +D + TVSP YA+E+   E +G  L+ ++  R   + G++NG+D   WNP
Sbjct:   81 IDIYVIDAPSLFAR-----PGNPYADSSNQAYADNYLRFALLGWVAARISEGLDAK--------WKPEIVH-SHDWHAGLVPAYIKASELASGK-KAVKTVFTVHNLAYQGLFPMSVFAELDLPGIF-LSMNGLEFYG------QVSFMKAGLYFADKITTVSPTYAKEIQIYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNP 262          
BLAST of EY728456 vs. ExPASy Swiss-Prot
Match: GLGA_STRE4 (Glycogen synthase OS=Streptococcus equi subsp. equi (strain 4047) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.712e-18
Identity = 77/239 (32.22%), Postives = 120/239 (50.21%), Query Frame = 1
Query:  133 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDF-IDGY-NKPVRGRK-INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVXEWNP*LTIYRCQI*XLHCDGCEASSEGSLXAEVGLPVDRNIPVIGFIGRLKSRK 834
            + +IYG     D+ D + RF+    AA+EA   + +            D++ V +D+HT++IP  LK  Y     Y++ + VF IHNIA+QG+F          P      FD  I+ Y +  +R    +NWMKA +L +D V TVSP YA E +     G  LD ++R     + GIVNG+D   +NP    +            +A+++ +L   +GLPV  ++P+IG + RL  +K
Sbjct:   95 RGRIYG-----DWDDGE-RFAYFQLAAIEAMEKIGVIP----------DILHV-HDYHTAMIPFLLKEKYHWIQAYQAIRTVFTIHNIAFQGQFD---------PGMLGDLFDVGIERYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHE-IQTPAFGQGLDQVMRMEAGKLSGIVNGIDTDLFNPARDPHLPASFSAEDLSGKAATKQALQERLGLPVRADVPLIGMVSRLTDQK 306          
The following BLAST results are available for this feature:
BLAST of EY728456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 299
Match NameE-valueIdentityDescription
GLGA_ANOFW9.769e-1927.24Glycogen synthase OS=Anoxybacillus flavithermus (s... [more]
GLGA_STRP41.276e-1829.21Glycogen synthase OS=Streptococcus pneumoniae sero... [more]
GLGA_FRATN1.276e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_STRSV1.666e-1830.79Glycogen synthase OS=Streptococcus sanguinis (stra... [more]
GLGA_VIBFM2.176e-1830.17Glycogen synthase OS=Vibrio fischeri (strain MJ11)... [more]
GLGA_FRATW2.176e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATT2.176e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATM2.176e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRAT12.176e-1831.71Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_STRE43.712e-1832.22Glycogen synthase OS=Streptococcus equi subsp. equ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728456 ID=EY728456; Name=EY728456; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGAATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCG
CTTCTTTCATTGCCACAAGAGAGGAGTTGATCGGGTGTTTGTGGATCATC
CTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAATCTATGGG
CCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTT
GTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACA
AATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGAC
TGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAA
AGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAATATTGCTT
ACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCTTCCAGCT
CAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAG
AGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGG
TCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGAC
AAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTAAGGGAAT
TGTGAACGGGATGGATGTCCANGAGTGGAACCCTTGACTGACAATATATA
GGTGTCAAATATGATNGCTTCACTGTGATGGATGCGAAGCCTCTTCTGAA
GGAAGCCTCCNAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGT
CATAGGCTTCATTGGTAGACTGAAGAGCAGAAAGGTCAAATATCTTGCAG
CTGCCATCCCCATTCATCAAGAGAATGTCAGATATTATCTTGGTCATGGC
A
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