EY728448

Overview
NameEY728448
Unique NameEY728448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_SYNY3 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechocystis sp. (strain PCC 6803) GN=cysA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13
Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREI 769
            NV K FG+   L+ ++ ++  G+ V ++GPSG+GKST+L+ IAGL  PD+G++ I G     +    +I    IG VFQ  ALF  LT+R+N+   L           E V E+
Sbjct:    7 NVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQDATHV----DIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEEL 116          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_PSEAE (Sulfate/thiosulfate import ATP-binding protein cysA OS=Pseudomonas aeruginosa GN=cysA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            I+ RNV K+F     L  ++  I+ GE V ++GPSG GK+T+L+IIAGL  PD G +   G      +S  ++    +G VFQ  ALF  +TV +NV   L   P+
Sbjct:    3 IEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFHGED----VSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPK 104          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_HAES1 (Fe(3+) ions import ATP-binding protein fbpC OS=Haemophilus somnus (strain 129Pt) GN=fbpC PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.982e-13
Identity = 36/95 (37.89%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  425 RNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            +N+ KSFG+  ++  ++  I+ G  V ++GPSG GK+T+L+++AGL +P  GE++I G      ++   I    I +VFQS ALF  +++ +NVG
Sbjct:    9 KNITKSFGKSVVIDNLNLSIKRGSMVTLLGPSGCGKTTVLRLVAGLESPTEGEIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVG 99          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_PSEPK (Sulfate/thiosulfate import ATP-binding protein cysA OS=Pseudomonas putida (strain KT2440) GN=cysA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.982e-13
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            I+ RNV K F     L  ++  I  GE V ++GPSG GK+T+L+IIAGL  PD+G +   G      +S  ++    +G VFQ  ALF  ++V +NV   L   P+
Sbjct:    3 IEVRNVSKRFNSFQALNAINLDINSGELVALLGPSGCGKTTLLRIIAGLETPDQGNIVFHGED----VSGHDVRDRNVGFVFQHYALFRHMSVFDNVAFGLRMKPK 104          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: Y081_MYCPN (Putative ABC transporter ATP-binding protein MG065 homolog OS=Mycoplasma pneumoniae GN=MPN_081 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = 2
Query:  401 DGDVLIDCRNVYKSFGE----KHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGL---XIGLVFQSAALFDSLTVREN--VGSFLYENPRCVMNNSELVREIG 772
            D + +I+ +NVYK          +L+G+  K++  + + I+GPSG+GK+T+L II+G+  P  G V + G +    ++D +++      +G +FQ   L  +LTVREN  VG+ L  NP   +N  EL+  +G
Sbjct:  227 DEEHIIELKNVYKYITNGVTTNAVLKGIDLKLKAHDFIVILGPSGSGKTTLLNIISGMDRPSSGSVVVNGQEMI-CMNDRQLTNFRRNYVGYIFQQYGLLPNLTVRENVEVGANLQRNPDKRINIDELLEAVG 358          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_SYNE7 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechococcus elongatus (strain PCC 7942) GN=cysA PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  401 DGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            D  V I    V K FG    ++ V   +  G  V ++GPSG+GKST+L++IAGL  PD G +++ G       ++E +    IG VFQ  ALF  LTVR+N+
Sbjct:    4 DKAVGIQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIFLTGRD----ATNESVRDRQIGFVFQHYALFKHLTVRKNI 101          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_BURPS (Sulfate/thiosulfate import ATP-binding protein cysA OS=Burkholderia pseudomallei GN=cysA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            I  RN++K FGE   L  VS     GE V ++GPSG GK+T+L++IAGL   D G+V ++G   A + + E      +G VFQ  ALF  +TV ENV   L   PR
Sbjct:    3 ITVRNLHKRFGEFAALDDVSLDFPAGELVALLGPSGCGKTTLLRVIAGLEHADSGQVVLQGLDVASVGARER----QVGFVFQHYALFRHMTVFENVAFGLRVKPR 104          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_BURMA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Burkholderia mallei GN=cysA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            I  RN++K FGE   L  VS     GE V ++GPSG GK+T+L++IAGL   D G+V ++G   A + + E      +G VFQ  ALF  +TV ENV   L   PR
Sbjct:    3 ITVRNLHKRFGEFAALDDVSLDFPAGELVALLGPSGCGKTTLLRVIAGLEHADSGQVVLQGLDVASVGARER----QVGFVFQHYALFRHMTVFENVAFGLRVKPR 104          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: RBSA_SILST (Ribose import ATP-binding protein rbsA OS=Silicibacter sp. (strain TM1040) GN=rbsA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 2
Query:  404 GDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            GDV++   N+ KSFG    L+GV F++R GE   I G +G GKST++ II G+L PD GE+ + G     + S      + IG V Q  AL   ++V EN+
Sbjct:    3 GDVILQISNLTKSFGPVKALKGVDFELRRGEIHAIAGENGAGKSTLMNIIDGILQPDSGEIRLDGTP-VEIPSPAAAQKMGIGFVHQEIALCPDVSVAENI 102          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_ECOLI (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli (strain K12) GN=fbpC PE=3 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            ++ RNV K FG   ++  ++  I  G+ V ++GPSG GK+TIL+++AGL  P  G+++I G      ++   I    I +VFQS ALF  +++ ENVG
Sbjct:    7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGED----VTHRSIQQRDICMVFQSYALFPHMSLGENVG 100          
The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
CYSA_SYNY31.518e-1337.72Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_PSEAE1.518e-1339.62Sulfate/thiosulfate import ATP-binding protein cys... [more]
FBPC_HAES11.982e-1337.89Fe(3+) ions import ATP-binding protein fbpC OS=Hae... [more]
CYSA_PSEPK1.982e-1338.68Sulfate/thiosulfate import ATP-binding protein cys... [more]
Y081_MYCPN2.588e-1333.83Putative ABC transporter ATP-binding protein MG065... [more]
CYSA_SYNE72.588e-1340.20Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BURPS2.588e-1343.40Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BURMA2.588e-1343.40Sulfate/thiosulfate import ATP-binding protein cys... [more]
RBSA_SILST3.381e-1340.59Ribose import ATP-binding protein rbsA OS=Siliciba... [more]
FBPC_ECOLI3.381e-1338.78Fe(3+) ions import ATP-binding protein fbpC OS=Esc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGAAACCCAGTAGTCGAAATGCTTCGAAAACCACTTTTTAT
GTGAACTTCCATTGATTATTTTATTTTTTTCATTTTGTGGTTTTTAGACC
AAATATCAATCTGCGTCTGCTTTACAATTATAAACACCGAAAATGGTCTC
TTTATCTTCATCTGGTTCACTGTTATTTCCTCTCGCAACAAAAAGTGTTA
GTTCTCGATTATCTAGACTTGCTAATTCGGACAAAAAACCGGTCAATTCG
TTCTGTTATAAGGCGAAAGAAGAACAGAGAAAAGTTGTTTGTGCTTGTGT
AGCGCCTCCAAGGGACTTGGGCACTGATGGATTCCCTGCCACCAAATTCA
ATGATTCATCTAAATCAGAGAATGTAAATACCTTATTCGAACCCGAGGAT
GATGGTGATGTTCTCATCGATTGTCGGAATGTTTACAAGTCATTTGGGGA
AAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAAGCTG
TTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGATT
ATTGCTGGGCTTCTTGCTCCAGACAGGGGAGAGGTTTACATTCGAGGTAN
GAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCNGATTG
GATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAA
AATGTTGGTTCCTTTCTGTATGAAAATCCAAGATGCGTGATGAACAATTC
AGAACTGGTGAGAGAAATTGGCTGCTGTGGATTAANGGAGTTGAGGTCGC
TACCATCTTATTGTCTGTTGATGAAAAAAAATTGCTTTACTCCATCCTAA
TTTCGATACCACAGGAATA
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