EY728448

Overview
NameEY728448
Unique NameEY728448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_ECO57 (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli O157:H7 GN=fbpC PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            ++ RNV K FG   ++  ++  I  G+ V ++GPSG GK+TIL+++AGL  P  G+++I G      ++   I    I +VFQS ALF  +++ ENVG
Sbjct:    7 VELRNVTKRFGSNTVIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGED----VTHRSIQQRDICMVFQSYALFPHMSLGENVG 100          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_VIBCH (Sulfate/thiosulfate import ATP-binding protein cysA OS=Vibrio cholerae GN=cysA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            N+ K FG+   L  +S KI  GE +G++GPSG+GK+T+L+IIAGL   D G ++ R       +++  +    +G VFQ+ ALF  +TV +NV
Sbjct:    7 NISKHFGQFQALAPLSLKIEDGEMIGLLGPSGSGKTTLLRIIAGLEGADSGTIHFRNRD----VTNVHVRDRRVGFVFQNYALFRHMTVADNV 95          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_RHOPA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Rhodopseudomonas palustris GN=cysA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCV-MNNSELVREIG 772
            I+ RN+ K FG    L  V  ++  GE + ++GPSG+GK+T+L+IIAGL  PD G V I G       + E      +G VFQ  ALF  + V ENV   L   PR +  + +E+ + +G
Sbjct:    3 IEVRNIVKEFGSFRALDNVDLRVETGELMALLGPSGSGKTTLLRIIAGLEWPDSGVVTIDGEDALAHGAAER----HVGFVFQHYALFRHMNVFENVAFGLRVQPRKIRKSEAEIKKRVG 118          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: RBSA3_RHIME (Ribose import ATP-binding protein rbsA 3 OS=Rhizobium meliloti GN=rbsA3 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCV 739
            L + +++ KSFG  H LR V+F +R GE   ++G +G GKST+++++ G + P +GEV I G KR  L    +   L I ++ Q  AL   L+V EN+  FL E P  +
Sbjct:    5 LANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVING-KRTELRDPRDARALGIVVIHQELALAPDLSVAENI--FLGELPTLI 110          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_TRIEI (Spermidine/putrescine import ATP-binding protein potA OS=Trichodesmium erythraeum (strain IMS101) GN=potA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            ++ R V+K F     ++GV F IR GE   I+GPSG GK+T L++IAG   P  GE+ IRG      +S        +  VFQS ALF+ L+V++N+
Sbjct:   19 VELRKVFKVFEGHTAVKGVDFNIRQGEFFSILGPSGCGKTTTLRLIAGFETPSAGEIIIRGQS----MSQTPAYRRPVNTVFQSYALFNHLSVKDNI 111          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_DESVH (Spermidine/putrescine import ATP-binding protein potA OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=potA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 2
Query:  407 DVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            D +I+ R V K+F +   L  +  +IR+GE + ++GPSG GK+TIL++I+G   PD G + ++G +    + D       +  VFQ+ ALF  ++VRENVG
Sbjct:    5 DNIIELRGVTKNFEDTCALDNIDLEIRNGEFLTLLGPSGCGKTTILRLISGFEKPDAGVITLKGQR----MDDAPPEARQVNTVFQNYALFPHMSVRENVG 101          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_ENT38 (Autoinducer 2 import ATP-binding protein lsrA OS=Enterobacter sp. (strain 638) GN=lsrA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  410 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            VLI+   ++K F    +LRG+ F +  G+   ++G +G GKST++KIIAG+  PD GE+ + G K    +   +   L I LV Q   LF +LTVREN+   L+  PR
Sbjct:    3 VLIEAHGIHKQFSGVPVLRGIDFTLLSGQVHALMGGNGAGKSTLMKIIAGVETPDSGELNVEG-KPFARLKPGQAHQLGIYLVPQEPMLFPNLTVRENI---LFRLPR 106          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_PHOPR (Fe(3+) ions import ATP-binding protein fbpC OS=Photobacterium profundum GN=fbpC PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  401 DGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            + D  +  +NV K FG+  ++  +  +I+ G  V ++GPSG GK+T+L+++AGL  P  G+++I G      +++  I    I +VFQS ALF  L++ +NVG
Sbjct:    2 ENDNFVVLKNVCKRFGDNTVINNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGED----VTNTSIQQRDICMVFQSYALFPHLSLYDNVG 100          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_CUCSA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Cucumis sativus GN=CYSA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            I+ RN+ K FG+   L  VS  I  GE V ++GPSG GK+T+L+IIAGL + D G V   G     +    ++    +G VFQ  ALF  +TV ENV
Sbjct:    3 IEVRNLSKRFGQFRALNDVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADNGSVLFAGEDATSV----DVRQRQVGFVFQHYALFKHMTVFENV 95          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_ANASP (Sulfate/thiosulfate import ATP-binding protein cysA OS=Anabaena sp. (strain PCC 7120) GN=cysA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            NV K FG    +  V+ +I+ G+ V ++GPSG+GKST+L++IAGL  PD G + + G       +++ +    IG VFQ  ALF  LTVR+N+
Sbjct:    7 NVSKQFGSFRAVDQVNLEIQSGKLVALLGPSGSGKSTLLRLIAGLEKPDDGRIILTGKD----ATNQSVQERNIGFVFQHYALFKHLTVRQNI 95          
The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
FBPC_ECO573.381e-1338.78Fe(3+) ions import ATP-binding protein fbpC OS=Esc... [more]
CYSA_VIBCH3.381e-1340.86Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_RHOPA3.381e-1338.33Sulfate/thiosulfate import ATP-binding protein cys... [more]
RBSA3_RHIME4.415e-1338.53Ribose import ATP-binding protein rbsA 3 OS=Rhizob... [more]
POTA_TRIEI4.415e-1341.24Spermidine/putrescine import ATP-binding protein p... [more]
POTA_DESVH5.767e-1338.61Spermidine/putrescine import ATP-binding protein p... [more]
LSRA_ENT385.767e-1339.81Autoinducer 2 import ATP-binding protein lsrA OS=E... [more]
FBPC_PHOPR5.767e-1335.92Fe(3+) ions import ATP-binding protein fbpC OS=Pho... [more]
CYSA_CUCSA5.767e-1343.30Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_ANASP5.767e-1341.94Sulfate/thiosulfate import ATP-binding protein cys... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGAAACCCAGTAGTCGAAATGCTTCGAAAACCACTTTTTAT
GTGAACTTCCATTGATTATTTTATTTTTTTCATTTTGTGGTTTTTAGACC
AAATATCAATCTGCGTCTGCTTTACAATTATAAACACCGAAAATGGTCTC
TTTATCTTCATCTGGTTCACTGTTATTTCCTCTCGCAACAAAAAGTGTTA
GTTCTCGATTATCTAGACTTGCTAATTCGGACAAAAAACCGGTCAATTCG
TTCTGTTATAAGGCGAAAGAAGAACAGAGAAAAGTTGTTTGTGCTTGTGT
AGCGCCTCCAAGGGACTTGGGCACTGATGGATTCCCTGCCACCAAATTCA
ATGATTCATCTAAATCAGAGAATGTAAATACCTTATTCGAACCCGAGGAT
GATGGTGATGTTCTCATCGATTGTCGGAATGTTTACAAGTCATTTGGGGA
AAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAAGCTG
TTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGATT
ATTGCTGGGCTTCTTGCTCCAGACAGGGGAGAGGTTTACATTCGAGGTAN
GAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCNGATTG
GATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAA
AATGTTGGTTCCTTTCTGTATGAAAATCCAAGATGCGTGATGAACAATTC
AGAACTGGTGAGAGAAATTGGCTGCTGTGGATTAANGGAGTTGAGGTCGC
TACCATCTTATTGTCTGTTGATGAAAAAAAATTGCTTTACTCCATCCTAA
TTTCGATACCACAGGAATA
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