EY728448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: YFIL_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiL OS=Bacillus subtilis GN=yfiL PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 36/99 (36.36%), Postives = 62/99 (62.63%), Query Frame = 2 Query: 413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISG-LXIGLVFQSAALFDSLTVRENV 706 ++ N+ K++G+K I++G+SF ++ GE+ G++GP+G GKST + +I+GL+ D G + + G +I E IG+V Q AL+ +LT EN+ Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITVGGY----VIGKETAKAKQKIGIVPQEIALYPTLTAHENL 95
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_LAWIP (Spermidine/putrescine import ATP-binding protein potA OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=potA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV--GSFLYENPRCVMNNSELVRE 766 +I+ +NV K F + L ++ +I +GE + ++GPSG GK+TIL+II+G PD GE+ I G +G + + VFQ ALF +TVR+NV G + + PR +N ELV E Sbjct: 7 IIELKNVSKIFEDTCALDNINLQIANGEFLTLLGPSGCGKTTILRIISGFETPDVGEILIAGVNVSGFPPERR----QVNTVFQHYALFPHMTVRDNVAFGLRMQKCPREKVN--ELVFE 120
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_DESDG (Spermidine/putrescine import ATP-binding protein potA OS=Desulfovibrio desulfuricans (strain G20) GN=potA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 2 Query: 407 DVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766 D + + R V K F + L + +IR+GE + ++GPSG GK+TIL++++G P G+V + G +++D + VFQ+ ALF +TVR+NVG L R + VRE Sbjct: 5 DYIFELRGVSKYFDDTCALENIDLQIRNGEFLTLLGPSGCGKTTILRLLSGFETPSSGDVILSGR----VVNDVPPEQRQVNTVFQNYALFPHMTVRDNVGFGLKMQKRPKDEIARRVRE 120
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_SHIFL (Autoinducer 2 import ATP-binding protein lsrA OS=Shigella flexneri GN=lsrA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775 L+ R+VYK + ++L+G+ F + GE ++G +G GKST++KIIAG+ D G + I G A L + L I LV Q LF SL+++EN+ L + + L+ +GC Sbjct: 11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIGGNNYARL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGC 130
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_SHIF8 (Autoinducer 2 import ATP-binding protein lsrA OS=Shigella flexneri serotype 5b (strain 8401) GN=lsrA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775 L+ R+VYK + ++L+G+ F + GE ++G +G GKST++KIIAG+ D G + I G A L + L I LV Q LF SL+++EN+ L + + L+ +GC Sbjct: 11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIGGNNYARL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGC 130
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_ECOLC (Autoinducer 2 import ATP-binding protein lsrA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=lsrA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775 L+ R+VYK + ++L+G+ F + GE ++G +G GKST++KIIAG+ D G + I G A L + L I LV Q LF SL+++EN+ L + + L+ +GC Sbjct: 11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIGGNNYARL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGC 130
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_PASMU (Fe(3+) ions import ATP-binding protein fbpC OS=Pasteurella multocida GN=fbpC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 35/95 (36.84%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 425 RNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709 +NV K+FG+ ++ + I+ G V ++GPSG GK+T+L+++AGL +P G+++I G ++ I I +VFQS ALF +++ +NVG Sbjct: 10 KNVTKAFGKAVVIDNLDLSIKRGTMVTLLGPSGCGKTTVLRLVAGLESPTSGQIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVG 100
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: UGPC2_RHIEC (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ugpC2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709 I R+V KS+G+ ++ GV +I+ GE + I+GPSG GKST+L++IAGL GE+ I G +++ E +VFQ+ AL+ +TV EN+G Sbjct: 4 ISIRDVKKSYGKHPVVHGVDLEIQSGEFIVILGPSGCGKSTLLRMIAGLEEITGGEIAIDGR----VVNQMEPRERGCAMVFQNYALYPHMTVAENIG 97
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_FUSNN (Spermidine/putrescine import ATP-binding protein potA OS=Fusobacterium nucleatum subsp. nucleatum GN=potA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 2 Query: 416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGL-----XIGLVFQSAALFDSLTVRENV 706 I+ NV KSF IL+ ++ KI GE IIGPSG GK+T+L++IAG ++PD G +Y + DE I L + +FQ ALF L V ENV Sbjct: 6 INIVNVNKSFDGVQILKDINLKIEQGEFFSIIGPSGCGKTTLLRMIAGFISPDSGAIY---------LGDENIVNLPPNLRNVNTIFQKYALFPHLNVFENV 98
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_ECOSM (Autoinducer 2 import ATP-binding protein lsrA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lsrA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775 L+ R+VYK + ++L+G+ F + GE ++G +G GKST++KIIAG+ D G + I G L + L I LV Q LF SL+++EN+ L + + + L+ +GC Sbjct: 11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIGGNNYVRL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSIQKMNNLLAALGC 130 The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bpback to top |