EY728448

Overview
NameEY728448
Unique NameEY728448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_RHILO (Sulfate/thiosulfate import ATP-binding protein cysA OS=Rhizobium loti GN=cysA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            NV K F     L  VS  I+ GE + ++GPSG+GK+T+L++IAGL  P RG+++  G + A   S + I    +G VFQ  ALF  +TV +N+G
Sbjct:    7 NVRKEFERFPALHDVSLDIKSGELIALLGPSGSGKTTLLRLIAGLERPTRGKIFF-GDEDA---SQKSIQERNVGFVFQHYALFRHMTVADNIG 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: NODI1_RHIME (Nod factor export ATP-binding protein I OS=Rhizobium meliloti GN=nodI PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 2
Query:  410 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            V ID  +V KS+G+K ++ G+SF +  GE  G++GP+G GKSTI ++I G+  P  GE+ + G     + S   ++ + IG+V Q   L    TVREN+
Sbjct:   35 VAIDVASVTKSYGDKPVINGLSFTVAAGECFGLLGPNGAGKSTITRMILGMTTPGTGEITVLG---VPVPSRARLARMRIGVVPQFDNLDLEFTVRENL 130          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: MALK_YERPS (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pseudotuberculosis GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            +VYK+FGE  I R ++ +I  GE V  +GPSG GKST+L++IAGL     GE+ I G KR   +   E     IG+VFQS AL+  L+V EN+
Sbjct:    8 SVYKAFGEAVISRDINLEIDDGEFVVFVGPSGCGKSTLLRMIAGLEDITSGELLI-GGKRMNEVPPSE---RGIGMVFQSYALYPHLSVAENM 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: MALK_YERPN (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            +VYK+FGE  I R ++ +I  GE V  +GPSG GKST+L++IAGL     GE+ I G KR   +   E     IG+VFQS AL+  L+V EN+
Sbjct:    8 SVYKAFGEAVISRDINLEIDDGEFVVFVGPSGCGKSTLLRMIAGLEDITSGELLI-GGKRMNEVPPSE---RGIGMVFQSYALYPHLSVAENM 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: MALK_YERPE (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pestis GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            +VYK+FGE  I R ++ +I  GE V  +GPSG GKST+L++IAGL     GE+ I G KR   +   E     IG+VFQS AL+  L+V EN+
Sbjct:    8 SVYKAFGEAVISRDINLEIDDGEFVVFVGPSGCGKSTLLRMIAGLEDITSGELLI-GGKRMNEVPPSE---RGIGMVFQSYALYPHLSVAENM 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: MALK_YERPA (Maltose/maltodextrin import ATP-binding protein malK OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=malK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  428 NVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            +VYK+FGE  I R ++ +I  GE V  +GPSG GKST+L++IAGL     GE+ I G KR   +   E     IG+VFQS AL+  L+V EN+
Sbjct:    8 SVYKAFGEAVISRDINLEIDDGEFVVFVGPSGCGKSTLLRMIAGLEDITSGELLI-GGKRMNEVPPSE---RGIGMVFQSYALYPHLSVAENM 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_ECOLI (Autoinducer 2 import ATP-binding protein lsrA OS=Escherichia coli (strain K12) GN=lsrA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775
            L+  R+VYK +   ++L+G+ F +  GE   ++G +G GKST++KIIAG+   D G + I G     L +      L I LV Q   LF SL+++EN+   L +    +     L+  +GC
Sbjct:   11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGC 130          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_ECODH (Autoinducer 2 import ATP-binding protein lsrA OS=Escherichia coli (strain K12 / DH10B) GN=lsrA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 41/121 (33.88%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775
            L+  R+VYK +   ++L+G+ F +  GE   ++G +G GKST++KIIAG+   D G + I G     L +      L I LV Q   LF SL+++EN+   L +    +     L+  +GC
Sbjct:   11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGC 130          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: LSRA_ECO24 (Putative autoinducer 2 import ATP-binding protein lsrA homolog OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lsrA PE=5 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREIGC 775
            L+  R+VYK +   ++L+G+ F +  GE   ++G +G GKST++KIIAG+   D G + I G   A L +      L I LV Q   LF SL+++EN+   + +    +     L+  +GC
Sbjct:   11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIGGNNYARL-TPVHAHQLGIYLVPQEPLLFPSLSIKENILFGMAKKQLSMQKMKNLLAALGC 130          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_ACTPL (Fe(3+) ions import ATP-binding protein fbpC OS=Actinobacillus pleuropneumoniae GN=fbpC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 35/95 (36.84%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  425 RNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            +N+ KSFG+  ++  +   I+ G  V ++GPSG GK+T+L+++AGL  P  G+++I G      ++   I    I +VFQS ALF  +++ +NVG
Sbjct:    9 KNITKSFGKATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVG 99          
The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
CYSA_RHILO2.862e-1242.55Sulfate/thiosulfate import ATP-binding protein cys... [more]
NODI1_RHIME3.738e-1239.39Nod factor export ATP-binding protein I OS=Rhizobi... [more]
MALK_YERPS3.738e-1247.31Maltose/maltodextrin import ATP-binding protein ma... [more]
MALK_YERPN3.738e-1247.31Maltose/maltodextrin import ATP-binding protein ma... [more]
MALK_YERPE3.738e-1247.31Maltose/maltodextrin import ATP-binding protein ma... [more]
MALK_YERPA3.738e-1247.31Maltose/maltodextrin import ATP-binding protein ma... [more]
LSRA_ECOLI3.738e-1233.88Autoinducer 2 import ATP-binding protein lsrA OS=E... [more]
LSRA_ECODH3.738e-1233.88Autoinducer 2 import ATP-binding protein lsrA OS=E... [more]
LSRA_ECO243.738e-1233.88Putative autoinducer 2 import ATP-binding protein ... [more]
FBPC_ACTPL3.738e-1236.84Fe(3+) ions import ATP-binding protein fbpC OS=Act... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGAAACCCAGTAGTCGAAATGCTTCGAAAACCACTTTTTAT
GTGAACTTCCATTGATTATTTTATTTTTTTCATTTTGTGGTTTTTAGACC
AAATATCAATCTGCGTCTGCTTTACAATTATAAACACCGAAAATGGTCTC
TTTATCTTCATCTGGTTCACTGTTATTTCCTCTCGCAACAAAAAGTGTTA
GTTCTCGATTATCTAGACTTGCTAATTCGGACAAAAAACCGGTCAATTCG
TTCTGTTATAAGGCGAAAGAAGAACAGAGAAAAGTTGTTTGTGCTTGTGT
AGCGCCTCCAAGGGACTTGGGCACTGATGGATTCCCTGCCACCAAATTCA
ATGATTCATCTAAATCAGAGAATGTAAATACCTTATTCGAACCCGAGGAT
GATGGTGATGTTCTCATCGATTGTCGGAATGTTTACAAGTCATTTGGGGA
AAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAAGCTG
TTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGATT
ATTGCTGGGCTTCTTGCTCCAGACAGGGGAGAGGTTTACATTCGAGGTAN
GAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCNGATTG
GATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAA
AATGTTGGTTCCTTTCTGTATGAAAATCCAAGATGCGTGATGAACAATTC
AGAACTGGTGAGAGAAATTGGCTGCTGTGGATTAANGGAGTTGAGGTCGC
TACCATCTTATTGTCTGTTGATGAAAAAAAATTGCTTTACTCCATCCTAA
TTTCGATACCACAGGAATA
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