EY728448

Overview
NameEY728448
Unique NameEY728448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_NITEU (Sulfate/thiosulfate import ATP-binding protein cysA OS=Nitrosomonas europaea GN=cysA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPR 733
            I+  ++ K FG    L  ++ K+  GE + ++GPSG+GK+T+L++IAGL   D G+V           +D+ I    +G VFQ  ALF ++T+ ENV   L   PR
Sbjct:    3 IEIHDLSKQFGSFTALNDINLKVNPGELLALLGPSGSGKTTLLRVIAGLETADSGQVLFNEEDS----TDKHIRDRHVGFVFQHYALFRNMTIFENVAFGLRVRPR 104          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA2_RHIME (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Rhizobium meliloti GN=cysA2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 2
Query:  425 RNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENP 730
            +N+ K FG    L  VS  IR GE + ++GPSG+GK+T+L+++AGL +P  G ++  G + A   S + +    IG VFQ  ALF  +TV +NV   L   P
Sbjct:    6 QNIRKEFGRFPALEDVSLDIRSGELIALLGPSGSGKTTLLRLVAGLESPTEGTIFF-GDEDA---SKKTVQQRNIGFVFQHYALFRHMTVLDNVAFGLKVRP 103          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: UGPC_RHOS4 (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=ugpC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            I  R+V KS+    ++ GV F+I  GE V I+GPSG GKST+L+++AGL     GE+ I G     +++  E     I +VFQ+ AL+  +TVREN+
Sbjct:    4 ISLRDVRKSYAGIEVIHGVDFEIADGEFVVIVGPSGCGKSTLLRMVAGLEEITAGEIAIGGR----VVNRLEPRERDIAMVFQNYALYPHMTVRENM 96          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: RBSA2_AGRT5 (Ribose import ATP-binding protein rbsA 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rbsA2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 2
Query:  404 GDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            G+V++   N++K+FG    LR  + +++ GE   + G +G GKST++ II G+L PD GE+ + G K   + S    + L IG V Q  AL   ++V EN+
Sbjct:    2 GEVILSMTNIHKAFGPVRALRSAALELQRGEIHALAGENGAGKSTLMHIIDGILQPDGGEILLDG-KPVRISSPNAANRLGIGFVHQEIALCPEISVAENM 101          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_VIBCH (Spermidine/putrescine import ATP-binding protein potA OS=Vibrio cholerae GN=potA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 2
Query:  374 VNTLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGL-----XIGLVFQSAALFDSLTVRENV 706
            + TL E    G  +I    + KSF  K I+  ++  + HGE + I+GPSG GK+T+L++IAG    D+G++         L+ D++++ +      +  VFQS ALF  +TV ENV
Sbjct:    4 IQTLNEQHSVGKPVIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQI---------LLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENV 110          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: NODI_RHIS3 (Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) GN=nodI PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  410 VLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            V ID   V KSFG+K ++ G+SF +  GE  G++GP+G GKSTI +++ G+  PD G++ + G     + +   ++   IG+V Q   L    TVREN+
Sbjct:    4 VAIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITVLGEP---VGARSRLARKSIGVVPQFDNLDQEFTVRENL 99          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC_MANSM (Fe(3+) ions import ATP-binding protein fbpC OS=Mannheimia succiniciproducens (strain MBEL55E) GN=fbpC PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 36/104 (34.62%), Postives = 62/104 (59.62%), Query Frame = 2
Query:  398 DDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVG 709
            +  D  +  +N+ K+FG+  ++  +   I+ G  V ++GPSG GK+TIL+++AGL  P  G+++I G      ++   I    I +VFQS ALF  +++ +NVG
Sbjct:    3 NQNDNFLVLKNINKTFGKSVVIDDLDLVIKRGTMVTLLGPSGCGKTTILRLVAGLENPTSGQIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVG 102          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_LEPIN (Sulfate/thiosulfate import ATP-binding protein cysA OS=Leptospira interrogans GN=cysA PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 39/117 (33.33%), Postives = 64/117 (54.70%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766
            I+ +N+ K FG    +  +S  +  GE V ++GPSG+GK+T+L+IIAGL   D+G+V   G +    +  +      +G VFQ  ALF  +T+ EN+   L    R    + + +R+
Sbjct:    3 IEVKNLVKRFGNFTAIDDLSLDVPSGELVALLGPSGSGKTTLLRIIAGLEDADKGQVIFEGRE----VGKKNAKDRGVGFVFQHYALFRHMTIFENIAFGLEVRKRSERPSKDTIRD 115          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_LEPIC (Sulfate/thiosulfate import ATP-binding protein cysA OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=cysA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 39/117 (33.33%), Postives = 64/117 (54.70%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE 766
            I+ +N+ K FG    +  +S  +  GE V ++GPSG+GK+T+L+IIAGL   D+G+V   G +    +  +      +G VFQ  ALF  +T+ EN+   L    R    + + +R+
Sbjct:    3 IEVKNLVKRFGNFTAIDDLSLDVPSGELVALLGPSGSGKTTLLRIIAGLEDADKGQVIFEGRE----VGKKNAKDRGVGFVFQHYALFRHMTIFENIAFGLEVRKRSERPSKDTIRD 115          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: Y796_METJA (Uncharacterized ABC transporter ATP-binding protein MJ0796 OS=Methanocaldococcus jannaschii GN=MJ0796 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 56/134 (41.79%), Postives = 71/134 (52.99%), Query Frame = 2
Query:  413 LIDCRNVYKSF--GEKHI--LRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDE--EISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSE-LVREIGCCGLXEL 793
            +I  +NV K++  GE+ I  L+ V+  I+ GE V I+GPSG+GKST+L II  L  P  GEVYI   K   L  DE  +I    IG VFQ   L   LT  ENV   L    R  M+  E   R + C  + EL
Sbjct:    1 MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAEL 134          
The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
CYSA_NITEU3.738e-1236.79Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA2_RHIME3.738e-1240.20Sulfate/thiosulfate import ATP-binding protein cys... [more]
UGPC_RHOS44.882e-1242.27sn-glycerol-3-phosphate import ATP-binding protein... [more]
RBSA2_AGRT54.882e-1236.63Ribose import ATP-binding protein rbsA 2 OS=Agroba... [more]
POTA_VIBCH4.882e-1235.34Spermidine/putrescine import ATP-binding protein p... [more]
NODI_RHIS34.882e-1238.38Nod factor export ATP-binding protein I OS=Rhizobi... [more]
FBPC_MANSM4.882e-1234.62Fe(3+) ions import ATP-binding protein fbpC OS=Man... [more]
CYSA_LEPIN4.882e-1233.33Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_LEPIC4.882e-1233.33Sulfate/thiosulfate import ATP-binding protein cys... [more]
Y796_METJA6.376e-1241.79Uncharacterized ABC transporter ATP-binding protei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGAAACCCAGTAGTCGAAATGCTTCGAAAACCACTTTTTAT
GTGAACTTCCATTGATTATTTTATTTTTTTCATTTTGTGGTTTTTAGACC
AAATATCAATCTGCGTCTGCTTTACAATTATAAACACCGAAAATGGTCTC
TTTATCTTCATCTGGTTCACTGTTATTTCCTCTCGCAACAAAAAGTGTTA
GTTCTCGATTATCTAGACTTGCTAATTCGGACAAAAAACCGGTCAATTCG
TTCTGTTATAAGGCGAAAGAAGAACAGAGAAAAGTTGTTTGTGCTTGTGT
AGCGCCTCCAAGGGACTTGGGCACTGATGGATTCCCTGCCACCAAATTCA
ATGATTCATCTAAATCAGAGAATGTAAATACCTTATTCGAACCCGAGGAT
GATGGTGATGTTCTCATCGATTGTCGGAATGTTTACAAGTCATTTGGGGA
AAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAAGCTG
TTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGATT
ATTGCTGGGCTTCTTGCTCCAGACAGGGGAGAGGTTTACATTCGAGGTAN
GAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCNGATTG
GATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAA
AATGTTGGTTCCTTTCTGTATGAAAATCCAAGATGCGTGATGAACAATTC
AGAACTGGTGAGAGAAATTGGCTGCTGTGGATTAANGGAGTTGAGGTCGC
TACCATCTTATTGTCTGTTGATGAAAAAAAATTGCTTTACTCCATCCTAA
TTTCGATACCACAGGAATA
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