EY728448

Overview
NameEY728448
Unique NameEY728448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: TAUB_PELUB (Taurine import ATP-binding protein tauB OS=Pelagibacter ubique GN=tauB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 2
Query:  455 HILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVRE-IGCCGLXELRSLPSYCL 817
            H L+ V+F ++ GE + ++GPSG GK+T+L I AG L P  G + + G +  G        G+  G+VFQ  ALF+ LTV ENV   L       +  ++ V E +   GL    + P+Y L
Sbjct:   22 HALKDVNFTLKKGELLTVLGPSGCGKTTLLNITAGFLRPTSGAIALNGNEIDG-------PGVERGMVFQQGALFEWLTVAENVDFGLRMKKEDPVKTAKKVEEWLNIVGLQGFGNTPTYQL 136          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_MYCMS (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma mycoides subsp. mycoides SC GN=potA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 43/126 (34.13%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV--GSFLYENPRCVMNNSELVREIGCCGL 784
            +++ RNV K +  + +L+G+SF ++ GE + ++GPSG GK+TILKII G   P+ GE+         +     I+      +FQS ALF  L V +NV  G  + +  + ++   E++R+I   GL
Sbjct:    5 ILELRNVTKEYDGQVVLKGISFNVKEGEFITLLGPSGCGKTTILKIIGGSQKPNSGEILFEDKNLIPI----PINKRQFNTIFQSYALFPHLNVFDNVAFGLTIKKTKKDIIER-EVMRQIRQVGL 125          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_MYCCT (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=potA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 43/126 (34.13%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  413 LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV--GSFLYENPRCVMNNSELVREIGCCGL 784
            +++ RNV K +  + +L+G+SF ++ GE + ++GPSG GK+TILKII G   P+ GE+         +     I+      +FQS ALF  L V +NV  G  + +  + ++   E++R+I   GL
Sbjct:    5 ILELRNVTKEYDGQVVLKGISFNVKEGEFITLLGPSGCGKTTILKIIGGSQKPNSGEILFEDKNLIPI----PINKRQFNTIFQSYALFPHLNVFDNVAFGLTIKKTKKDIIER-EVMRQIRQVGL 125          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC2_RHOSR (Fe(3+) ions import ATP-binding protein fbpC 2 OS=Rhodococcus sp. (strain RHA1) GN=fbpC2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREI 769
            ++   V KSFG   ILRGV+F +  G    I+GPSG GK+T+L+++AG   PD G + + G   AG           +G V Q  ALF   TV  NVG  L    R     +EL+  +
Sbjct:    5 LEVDGVDKSFGGATILRGVAFAVEPGSTTAIVGPSGCGKTTLLRLVAGFEKPDAGTIALAGRVVAG-SGWAPAHRRSVGYVAQDGALFPHATVGANVGFGLPRRARTPARIAELLEMV 121          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC1_RHOSR (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Rhodococcus sp. (strain RHA1) GN=fbpC1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 45/118 (38.14%), Postives = 60/118 (50.85%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREI 769
            ++   V KSFG   ILRGV+F +  G    I+GPSG GK+T+L++IAG   PD G + + G   AG           +G V Q  ALF   TV  NVG  L    R     +EL+  +
Sbjct:    5 LEVDGVDKSFGGATILRGVAFAVESGSTTAIVGPSGCGKTTLLRLIAGFEKPDAGTIALAGRVVAG-GGWAPAHRRSVGYVAQDGALFPHATVGANVGFGLPRRARTPARIAELLEMV 121          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: CYSA_BORBR (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bordetella bronchiseptica GN=cysA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 42/97 (43.30%), Postives = 55/97 (56.70%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            I+ R + K FG    L  VS  I  GE V ++GPSG GK+T+L+IIAGL + D G V   G       +D ++    +G VFQ  ALF  +TV ENV
Sbjct:    3 IEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGED----ATDVDVRQRQVGFVFQHYALFKHMTVFENV 95          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: POTA_OENOB (Spermidine/putrescine import ATP-binding protein potA OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=potA PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 2
Query:  395 EDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENV 706
            E+    LI+ +NV   +GE  +L+ V  +I  G+   ++GPSG+GKSTIL +I+G L P  G++ I G     L S++      +  VFQ+ ALF ++ V +NV
Sbjct:    3 EETVQPLIEFKNVSLDYGETKVLKKVDLEIEEGKFYTLLGPSGSGKSTILSLISGRLQPTGGDILIEGKNVNSLPSNQR----KVNTVFQNYALFPNMNVYDNV 102          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: PHNC_WOLSU (Phosphonates import ATP-binding protein phnC OS=Wolinella succinogenes GN=phnC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 2
Query:  413 LIDCRNVYKSF-GEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDE-EISGLXIGLVFQSAALFDSLTVRENV 706
            ++   N+ K + G++  L+GVS +I+ G+ VG+IGPSG GKST+++ I  L+ P  GEV++ G     L   + + +   +G++FQ  AL + L+V ENV
Sbjct:    1 MLKIENLTKRYKGDEIALKGVSLEIKKGQVVGLIGPSGAGKSTLIRCINRLIEPSSGEVWLEGVNLPSLSRTKLKEARREMGMIFQEYALIERLSVMENV 100          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: METN_RHILO (Methionine import ATP-binding protein metN OS=Rhizobium loti GN=metN PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  392 PEDDGDV--LIDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGL--XIGLVFQSAALFDSLTVRENV 706
            P+   DV  L+D +   + FG    + G+S  +R GE +GIIG SG GKST+++ + GL  PD GEV+I G +  G + + ++  L   IG++FQ   L  + TV +NV
Sbjct:   19 PDASQDVVRLVDLK---RRFGTTPAIDGISLTVRKGEILGIIGRSGAGKSTLIRCLNGLERPDSGEVFIEG-REIGRLGERDLQPLRRRIGMIFQHFNLLSAKTVEDNV 123          
BLAST of EY728448 vs. ExPASy Swiss-Prot
Match: FBPC3_RHOSR (Fe(3+) ions import ATP-binding protein fbpC 3 OS=Rhodococcus sp. (strain RHA1) GN=fbpC3 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 45/118 (38.14%), Postives = 60/118 (50.85%), Query Frame = 2
Query:  416 IDCRNVYKSFGEKHILRGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDRGEVYIRGXKRAGLISDEEISGLXIGLVFQSAALFDSLTVRENVGSFLYENPRCVMNNSELVREI 769
            ++   V KSFG   ILRGV+F +  G    I+GPSG GK+T+L++IAG   PD G + + G   AG           +G V Q  ALF   TV  NVG  L    R     +EL+  +
Sbjct:    5 LEVDGVDKSFGGATILRGVAFAVEPGSTTAIVGPSGCGKTTLLRLIAGFEKPDAGTIALAGRVVAG-GGWTPAHRRSVGYVAQDGALFPHATVGANVGFGLPRRARTPARIAELLEMV 121          
The following BLAST results are available for this feature:
BLAST of EY728448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
TAUB_PELUB6.376e-1236.07Taurine import ATP-binding protein tauB OS=Pelagib... [more]
POTA_MYCMS6.376e-1234.13Spermidine/putrescine import ATP-binding protein p... [more]
POTA_MYCCT6.376e-1234.13Spermidine/putrescine import ATP-binding protein p... [more]
FBPC2_RHOSR6.376e-1237.29Fe(3+) ions import ATP-binding protein fbpC 2 OS=R... [more]
FBPC1_RHOSR6.376e-1238.14Fe(3+) ions import ATP-binding protein fbpC 1 OS=R... [more]
CYSA_BORBR6.376e-1243.30Sulfate/thiosulfate import ATP-binding protein cys... [more]
POTA_OENOB8.327e-1237.50Spermidine/putrescine import ATP-binding protein p... [more]
PHNC_WOLSU8.327e-1238.00Phosphonates import ATP-binding protein phnC OS=Wo... [more]
METN_RHILO8.327e-1238.53Methionine import ATP-binding protein metN OS=Rhiz... [more]
FBPC3_RHOSR8.327e-1238.14Fe(3+) ions import ATP-binding protein fbpC 3 OS=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728448 ID=EY728448; Name=EY728448; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGAAACCCAGTAGTCGAAATGCTTCGAAAACCACTTTTTAT
GTGAACTTCCATTGATTATTTTATTTTTTTCATTTTGTGGTTTTTAGACC
AAATATCAATCTGCGTCTGCTTTACAATTATAAACACCGAAAATGGTCTC
TTTATCTTCATCTGGTTCACTGTTATTTCCTCTCGCAACAAAAAGTGTTA
GTTCTCGATTATCTAGACTTGCTAATTCGGACAAAAAACCGGTCAATTCG
TTCTGTTATAAGGCGAAAGAAGAACAGAGAAAAGTTGTTTGTGCTTGTGT
AGCGCCTCCAAGGGACTTGGGCACTGATGGATTCCCTGCCACCAAATTCA
ATGATTCATCTAAATCAGAGAATGTAAATACCTTATTCGAACCCGAGGAT
GATGGTGATGTTCTCATCGATTGTCGGAATGTTTACAAGTCATTTGGGGA
AAAGCATATATTGAGAGGTGTGAGCTTCAAGATTAGACATGGTGAAGCTG
TTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGATT
ATTGCTGGGCTTCTTGCTCCAGACAGGGGAGAGGTTTACATTCGAGGTAN
GAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCNGATTG
GATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGAA
AATGTTGGTTCCTTTCTGTATGAAAATCCAAGATGCGTGATGAACAATTC
AGAACTGGTGAGAGAAATTGGCTGCTGTGGATTAANGGAGTTGAGGTCGC
TACCATCTTATTGTCTGTTGATGAAAAAAAATTGCTTTACTCCATCCTAA
TTTCGATACCACAGGAATA
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