EY728438

Overview
NameEY728438
Unique NameEY728438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: L18A_LUPLU (Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23
Identity = 57/149 (38.26%), Postives = 94/149 (63.09%), Query Frame = 3
Query:   54 STLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLE-KEKGIFKALEAYALANPN 497
            ST+ P KL+K      D ++PKV+ + +++VE++ G+GGPG+IKK   +      +  H++DA+D+ N  YNY+ I GEG     +++ +SYESK++  PDGGS   + +KF+ K   ++  E V+   + K  G+FKA+E Y LA+P+
Sbjct:   12 STVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDE--SLEKISYESKILPGPDGGSIGKINVKFHTK--GDVLSETVRDQAKFKGLGLFKAIEGYVLAHPD 155          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: RNS1_PANGI (Ribonuclease 1 OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22
Identity = 62/158 (39.24%), Postives = 87/158 (55.06%), Query Frame = 3
Query:   24 GCSHVECRGYSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 491
            G    E    ST+P +KL+   +L  D +LPK  PQ +K+ E+I GDGG G++K     E + +   K R+DA+DK+   Y Y+ I   GD  +  I+ +     +V TPDGGS  K+T +  +     A I EE +K   EK   IFKA+EAY LAN
Sbjct:    1 GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDGGVGTVKLVTLGEASQFNTMKQRIDAIDKDALTYTYSII--GGDILLDIIESIVNHFTIVPTPDGGSIVKNTTI--YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 154          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: L18B_LUPLU (Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.071e-22
Identity = 53/148 (35.81%), Postives = 89/148 (60.14%), Query Frame = 3
Query:   54 STLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 497
            S +   KLFK      D ++PKV+ Q+ ++VE++ G+GGPG++KK     G    Y  H++DA+D+ +  YNY+ + G G     +++ +++ESK++  PDGGS   + +KF+ K G  + +   +    +  G+FKA+E Y LANPN
Sbjct:   12 SAVAQAKLFKALTKDSDDIIPKVIEQI-QSVEIVEGNGGPGTVKKITASHGGHTSYVLHKIDAIDEASFEYNYSIVGGTGLDE--SLEKITFESKLLSGPDGGSIGKIKVKFHTK-GDVLSDAVREEAKARGTGLFKAVEGYVLANPN 155          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: ALL2_APIGR (Major allergen Api g 2 OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.687e-21
Identity = 60/148 (40.54%), Postives = 89/148 (60.14%), Query Frame = 3
Query:   54 STLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 491
            ST+  EK+++ F+L  DT+ PKVLPQ++K+VE++ GDGG G++K  +  E  ++   K +VD +DK    Y YT I   GD  +  ++ V  E  VV T DGG   K+T +  +  K  A + E+++K   EK    FKA+EAY LAN
Sbjct:   12 STVSAEKMYQGFLLDMDTVFPKVLPQLIKSVEILEGDGGVGTVKLVHLGEATEYTTMKQKVDVIDKAGLAYTYTTI--GGDILVDVLESVVNEFVVVPT-DGGCIVKNTTI--YNTKGDAVLPEDKIKEATEKSALAFKAVEAYLLAN 154          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: RAP_TAROF (Root allergen protein OS=Taraxacum officinale PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.818e-21
Identity = 55/149 (36.91%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   54 STLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 500
            S+L P  +FK FV+ FDT+ PK  P+  K+++ I GDGG G+IK   + +G  +   KH+VDA+D  N   +YT    EGD  +  I+  ++  K + + DGGS     + F  K  A++ +E V    E  K  FKA+E Y +++P A
Sbjct:   10 SSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFTSSKHKVDAIDSNNFSISYTIF--EGDVLMGIIESGTHHLKFLPSADGGSVYKHSMVFKCKGDAKLTDENVSLMKEGLKKTFKAIETYVISHPEA 156          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: PR13_PETCR (Pathogenesis-related protein B OS=Petroselinum crispum GN=PCPR1-3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.818e-21
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 3
Query:   24 GCSHVECRGYSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 491
            G    E    S++  EKLFK   L  DTLLP+VLP  +K+ E + GDGG G++K  +  + + +K  K +VDA+DK    Y+Y+ I  +GD  +  I+ ++     V   DGG      I F  K  A + EE +K   ++   IFKA+EAY +AN
Sbjct:    2 GVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSII--DGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN 155          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: PR11_PETCR (Pathogenesis-related protein A OS=Petroselinum crispum GN=PCPR1-1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.742e-20
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 3
Query:   24 GCSHVECRGYSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 491
            G    E    S++  EKLFK   L  DTLLP+VLP  +K+ E + GDGG G++K  +  + + +K  K +VDA+DK    Y+Y+ I  +GD  +  I+ ++     V   DGG      I F  K  A + EE +K   ++   IFKA+EAY +AN
Sbjct:    2 GVQKSEVETTSSVSAEKLFKGLCLDIDTLLPQVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSII--DGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN 155          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.275e-20
Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 3
Query:   60 LPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 497
            + P +LFK  V+  D L+PK++PQV KN+E      G GSIKK NFVEG+  KY KH++  +D +N +  Y+ IEG+  GD     ++ +SY+ K     +GG     + +++ K    +K+E+   G ++   +FK +EAY LANP+
Sbjct:   14 IAPTRLFKALVVDSDNLIPKLMPQV-KNIEA----EGDGSIKKMNFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGD----KLESISYDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQGMELFKIVEAYLLANPS 152          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: RNS2_PANGI (Ribonuclease 2 OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 3
Query:   24 GCSHVECRGYSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 491
            G    E +  S +P EKLFK   L  DT++PK  P+ +K+V+++ G+GG G+IK     +   +   K R+DA+D+    Y YT I   GD  +  I+ +    K+V T DGGS  T    +     A I EE +K   +K   +FKA+EAY LAN
Sbjct:    1 GVQKTETQAISPVPAEKLFKGSFLDMDTVVPKAFPEGIKSVQVLEGNGGVGTIKNVTLGDATPFNTMKTRIDAIDEHAFTYTYTII--GGDILLDIIESIENHFKIVPT-DGGSTITQTTIYNTIGDAVIPEENIKDATDKSIQLFKAVEAYLLAN 153          
BLAST of EY728438 vs. ExPASy Swiss-Prot
Match: ABR17_PEA (ABA-responsive protein ABR17 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = 3
Query:   54 STLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANP 494
            ST+ P KL+K      D ++PKV+ +  + VE+I G+GGPG+IKK + +E     Y  H++DA+D+ N  YNY+ + G G     +++ V++E+ ++   DGGS   + +K++ K  A + +        K  G+ KA+E Y LANP
Sbjct:   12 STVAPPKLYKALAKDADEIVPKVIKEA-QGVEIIEGNGGPGTIKKLSILEDGKTNYVLHKLDAVDEANFGYNYSLVGGPGLHE--SLEKVAFETIILAGSDGGSIVKISVKYHTKGDAALSDAVRDETKAKGTGLIKAIEGYVLANP 155          
The following BLAST results are available for this feature:
BLAST of EY728438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
L18A_LUPLU4.897e-2338.26Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV... [more]
RNS1_PANGI2.430e-2239.24Ribonuclease 1 OS=Panax ginseng PE=1 SV=1[more]
L18B_LUPLU7.071e-2235.81Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV... [more]
ALL2_APIGR2.687e-2140.54Major allergen Api g 2 OS=Apium graveolens PE=1 SV... [more]
RAP_TAROF7.818e-2136.91Root allergen protein OS=Taraxacum officinale PE=1... [more]
PR13_PETCR7.818e-2137.18Pathogenesis-related protein B OS=Petroselinum cri... [more]
PR11_PETCR1.742e-2037.18Pathogenesis-related protein A OS=Petroselinum cri... [more]
PRS2_SOLTU2.275e-2037.84Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
RNS2_PANGI2.971e-2037.18Ribonuclease 2 OS=Panax ginseng PE=1 SV=1[more]
ABR17_PEA2.971e-2035.37ABA-responsive protein ABR17 OS=Pisum sativum PE=2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728438 ID=EY728438; Name=EY728438; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGCTTAGACATCATGGGTGTTCTCACGTTGAATGTAGAGGA
TACAGCACTCTCCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCAGTT
CGACACCCTTCTGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAAT
TGATTTCAGGGGATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTT
GAAGGTGCTGATTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAA
AGAGAACAAGATATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTA
ACATCCCTACTATTGATCATGTTTCTTATGAGAGTAAGGTTGTGGGCACC
CCTGACGGAGGAAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACC
AGGTGCCGAGATTAAGGAAGAGCAGGTTAAGGGAGGCTTGGAAAAGGAGA
AGGGAATTTTTAAGGCTCTGGAAGCCTATGCCTTGGCAAACCCCAATGCC
GTATAAGCTCTTACGTCAACACTTCACCGCACTTGCGTCGCCTTTGTTGC
AACATTATGAATAATCATGTNTATGGCTTCCGTATGTCGTGTCTCTTTGT
NTTCANATATTGCCATTTATATAATTGGCTTTTGGCTAAATAAAAAAAAA
AAAGAGTTTGCTTTTCCCTTTATCTTATTGAACTTCATCATTATAAATAA
TGCGGTGGCAGAGATCACGATCATCAATCAACTGCAGAGGAAATGTAGAC
TTATTTACAATAAGCTTGGATAAAGTTGTACCTCAGTCTGTAGTATTGAT
GGATGATCATCACTGTCTAATATTATCCATTATGACATTTAGATTAAATG
AATTAACCCGTATTCGATAAAAAAAAAAAAAAAAAAGGCGGG
back to top