EY728435

Overview
NameEY728435
Unique NameEY728435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.484e-13
Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 1
Query:  388 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAA------PKSSVKANSQKS 693
            R     + V  V  A  +T  ++K  +RG+RQRPWGKWAAEIRDP K VR+WLGT+NT              +RG  A  NF + TP  A      P S VK   +K+
Sbjct:   98 RAVKSESTVSPVVSATTTTTGEKK--FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF-SVTPTTATEKKAPPPSPVKKKKKKN 202          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 1
Query:  457 KNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSLNPNFNYLNNSDQDYL 777
            + +YRG+R+RPWGK+AAEIRD  K G RVWLGTF+T              +RGK A +NFP+E       SS  ANS  S  +             F YL++S  D L
Sbjct:   17 QGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSSSQQVF----------EFEYLDDSVLDEL 114          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  463 QYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP 636
            ++RG+RQRPWGKWAAEIRDP++ VRVWLGTF+T              +RG  A++NFP
Sbjct:   86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  457 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNE 642
            K  YRG+RQRPWGK+AAEIRDP  KG RVWLGTF+T              +RG KA VNFP E
Sbjct:  142 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLE 204          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 1
Query:  457 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNE 642
            K  YRG+RQRPWGK+AAEIRDP  KG RVWLGTF+T              +RG KA VNFP E
Sbjct:  135 KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLE 197          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.438e-13
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  448 RKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPN 639
            R++  QYRG+R+RPWGK+AAEIRDP K G RVWLGT+ T              +RG KAK+NFP+
Sbjct:   86 RQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPH 150          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 1
Query:  388 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAP 660
            R+  GS+AV             ++ ++RG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP ++ +  P
Sbjct:    2 RRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPP 92          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 1
Query:  466 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPS 729
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP+      P+  V+   ++  P+   S + P+
Sbjct:  103 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPE-PVRLTVKRRSPEPASSSISPA 190          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12
Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query:  451 KRKNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKS 666
            + K  YRG+R RPWGK+AAEIRDPT +G RVWLGTF T              +RG KA +NFP E     P++
Sbjct:  132 EEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRA 204          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 46/136 (33.82%), Postives = 61/136 (44.85%), Query Frame = 1
Query:  379 SAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKA-CLSPVQPSLNPNFNYLNNSDQDYLHN 783
            S  RK         +  A  ST R     YRG+R+RPWG++AAEIRDP    R WLGTF+T               RG KA+ NF   T    P+     +++KS P A C  P  P  +   N+        ++N
Sbjct:   33 SRNRKLSSKDTTVTIAGAGSSTTR-----YRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAVIMPEPRFSFSNKKSSPSARCPLPSLPLDSSTQNFYGAPAAQRIYN 163          
The following BLAST results are available for this feature:
BLAST of EY728435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CRF2_ARATH2.484e-1341.67Ethylene-responsive transcription factor CRF2 OS=A... [more]
ERF97_ARATH5.533e-1341.67Ethylene-responsive transcription factor 14 OS=Ara... [more]
CRF1_ARATH5.533e-1355.17Ethylene-responsive transcription factor CRF1 OS=A... [more]
ERF5_TOBAC7.227e-1358.73Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_NICSY7.227e-1358.73Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF99_ARATH9.438e-1353.85Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF82_ARATH1.233e-1239.56Ethylene-responsive transcription factor 3 OS=Arab... [more]
ERF2_NICSY1.610e-1242.70Ethylene-responsive transcription factor 2 OS=Nico... [more]
EF103_ARATH1.610e-1249.32Ethylene-responsive transcription factor 6 OS=Arab... [more]
ESR1_ARATH2.103e-1233.82Ethylene-responsive transcription factor ESR1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728435 ID=EY728435; Name=EY728435; organism=Citrus sinensis; type=EST; length=846bp
CACGCGTCCGAGAATCCAAAACTCTCTCAAGCCAACAAAAGCAAATTTTA
CATTTAACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAA
ACCAGAAGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCG
GGCTACATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGA
GTATCTCTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGC
CGATCGTCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGAT
GAAGAAGAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGAT
GATGGCTGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATG
GATCTACAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGA
AAGAGGAAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATG
GGCTGCTGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAA
CTTTCAATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGG
AGGATCCGTGGGAAGAAAGCTAAGGTTAACTTTCCAAATGAAACTCCTGC
TGCTGCTCCAAAGAGCTCAGTGAAGGCNAACTCTCAGAAATCCGTTCCCA
AAGCTTGCCTAAGCCCCGTGCAGCCAAGTTTGAACCCAAACTTCAATTAC
TTGAACAACTCCGATCAGGATTACTTACACAATGTGAGTATCTTGGAGGA
GAACCACANGTGATCAATATGGATATATGGGCCCCCCCCCTGATGA
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