EY728435

Overview
NameEY728435
Unique NameEY728435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  466 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSL 732
            YRG+RQRPWGK+AAEIRDP K G RVWLGT+ T              +RG KA +NFP+      P+  V+  +++  P+   S +  +L
Sbjct:   99 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPE-PVRLTAKRRSPEPASSSISSAL 187          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = 1
Query:  445 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP--------NETPAAAPKSSVKANSQKSVP------KACLSPVQPSLN 735
            E+ ++ +YRG+R+RPWG++AAEIRDP K  RVWLG+FNT               RG KA  NFP        + TP     S   ++   ++P       A  SPV  +L+
Sbjct:   46 EKSKEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPLIGYYGISSATPVNNNLSETVSDGNANLPLVGDDGNALASPVNNTLS 156          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1
Query:  421 VEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSLN 735
            V+ A   T      +YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NFP     A   S  ++ SQ S  ++      P+LN
Sbjct:    5 VKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPCYNINAHCLSLTQSLSQSSTVESSF----PNLN 105          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 40/97 (41.24%), Postives = 52/97 (53.61%), Query Frame = 1
Query:  454 RKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANSQKSVPKACLSPVQPSLNPN 741
            +   YRG+RQRPWGK+AAEIRDP K G RVWLGTF T              +RG +A +NFP    +  P   V+  S++S   +  S    S + N
Sbjct:  113 KAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEP-DPVRITSKRSSSSSSSSSSSTSSSEN 208          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 1
Query:  466 YRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAP--------KSSVKANSQKSVPK 702
            YRG+RQRPWGK+AAEIRDP K G RVWLGTF T              +RG +A +NFP    +  P        +SS  ++++   PK
Sbjct:  148 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPK 235          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 1
Query:  388 RKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAP 660
            RK  GS+ V            K   +YRG+R+RPWG++AAEIRDP K  RVWLGTF++              +RG KAK NFP +   ++P
Sbjct:    2 RKGRGSSVVGPALPVTAGGSVKEP-RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSP 91          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  442 TERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF--PNETPAAAPKSSVKANS 684
            T   ++  YRG+R+RPWG++AAEIRDP K  RVWLGTF+T               RG KAK NF  P+E  + +  S+++++S
Sbjct:   19 TNGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSENQSTSHSSTMESSS 101          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 1
Query:  379 SAGRKSHGSTAVKHVEQAKKSTERKRKN----QYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNETPAAAPKSSVKANS 684
            S+  + + S++    +Q+ K  ER  +      YRG+R+RPWGK+AAEIRDP  KG R+WLGTF +              +RG+KA +NFP +    A K    ANS
Sbjct:   77 SSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLD----AGKYEAPANS 179          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  457 KNQYRGIRQRPWGKWAAEIRDPT-KGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPNE 642
            +  YRG+R+RPWGK+AAEIRDP  KGVRVWLGTF+T              +RG KA +NFP E
Sbjct:   69 QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLE 131          
BLAST of EY728435 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 1
Query:  433 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNF---PNETPAAAPKSSVKANSQKSVPKA 705
            K S   + + +YRG+RQRPWGKWAAEIRDP +  R+WLGTF T              +RG  A  NF   P   P    +   ++N   S+ ++
Sbjct:  106 KPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISES 199          
The following BLAST results are available for this feature:
BLAST of EY728435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
ERF2_TOBAC2.103e-1242.22Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF77_ARATH2.746e-1236.94Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF76_ARATH2.746e-1240.95Ethylene-responsive transcription factor 11 OS=Ara... [more]
EF101_ARATH2.746e-1241.24Ethylene-responsive transcription factor 2 OS=Arab... [more]
EF100_ARATH2.746e-1243.18Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF83_ARATH3.587e-1241.76Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF4_NICSY3.587e-1243.37Ethylene-responsive transcription factor 4 OS=Nico... [more]
EF106_ARATH3.587e-1239.25Ethylene-responsive transcription factor ERF106 OS... [more]
EF105_ARATH3.587e-1255.56Ethylene-responsive transcription factor ERF105 OS... [more]
CRF4_ARATH3.587e-1238.30Ethylene-responsive transcription factor CRF4 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728435 ID=EY728435; Name=EY728435; organism=Citrus sinensis; type=EST; length=846bp
CACGCGTCCGAGAATCCAAAACTCTCTCAAGCCAACAAAAGCAAATTTTA
CATTTAACCCATTCTCTCCTAAAAATCTTTTCTCTTTAGTGCCTGAACAA
ACCAGAAGAAACGAGAAACCTTAACCATGTGTGGAGGTGCTATCATTTCG
GGCTACATCCCGCCCACCGTGCCGGGCCGGCCAAAGAAGCTGACGGCGGA
GTATCTCTGGCCGGAGCTGAAGAGGTCATCCAACAAGAAGTACTCAAAGC
CGATCGTCGACGATGACTTCGAGGCTGATTTCCAAGGATTCAAGGACGAT
GAAGAAGAGTCTGACATTGATGGTGACGTGGACGTTGATGCCGACTTGAT
GATGGCTGATATTAAGCCTTTCACTTTCTCAGCTGGTCGCAAGTCTCATG
GATCTACAGCCGTGAAGCACGTTGAACAAGCTAAAAAATCCACAGAAAGA
AAGAGGAAGAATCAATATAGGGGAATTAGGCAGCGTCCATGGGGAAAATG
GGCTGCTGAGATCCGTGACCCCACAAAAGGGGTTCGTGTCTGGCTAGGAA
CTTTCAATACCGCTGAAGAAGCCGCTAGGGCTTATGATGCCGAGGCACGG
AGGATCCGTGGGAAGAAAGCTAAGGTTAACTTTCCAAATGAAACTCCTGC
TGCTGCTCCAAAGAGCTCAGTGAAGGCNAACTCTCAGAAATCCGTTCCCA
AAGCTTGCCTAAGCCCCGTGCAGCCAAGTTTGAACCCAAACTTCAATTAC
TTGAACAACTCCGATCAGGATTACTTACACAATGTGAGTATCTTGGAGGA
GAACCACANGTGATCAATATGGATATATGGGCCCCCCCCCTGATGA
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