EY728434

Overview
NameEY728434
Unique NameEY728434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3060 contig Csv1_Contig3060:94..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 5.081e-68
Identity = 119/195 (61.03%), Postives = 159/195 (81.54%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IP A+     VQAYL+D YWEDIGTIEAFYNANL +T++P+P FSFYD  APIYT+ RYLPP+K+LD  VT+S+IGEGC++KNC+I HSV+G+RS I  G +IE++LLMGAD+Y+   +R+    KG +P+GIG ++ I+RAIIDKNARIG +VKI+N D+VQEA RE+ G++I+SGIV ++K+A+I  GTII
Sbjct:  236 EIIPDASK-DHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPPTKLLDCHVTESIIGEGCILKNCRIQHSVLGVRSRIETGCVIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAIIDKNARIGHDVKIINKDNVQEADRESQGFYIRSGIVVVLKNAVITDGTII 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.132e-67
Identity = 119/195 (61.03%), Postives = 158/195 (81.03%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IP A      VQAYL+D YWEDIGTIEAFYNANL +T++P+P FSFYD  APIYT+ RYLPP+K+LD  VT+S+IGEGC++KNC+I HSV+G+RS I  G +IE++LLMGAD+Y+   +R+    KG +P+GIG ++ I+RAIIDKNARIG +VKI+N D+VQEA RE+ G++I+SGIV ++K+A+I  GTII
Sbjct:  236 EIIPDAAK-DHNVQAYLFDDYWEDIGTIEAFYNANLALTQQPMPPFSFYDEEAPIYTRARYLPPTKLLDCHVTESIIGEGCILKNCRIQHSVLGVRSRIETGCMIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAIIDKNARIGHDVKIINKDNVQEADRESQGFYIRSGIVVVLKNAVITDGTII 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.788e-66
Identity = 116/195 (59.49%), Postives = 156/195 (80.00%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IP A+     VQAYL+D YWEDIGTIEAFY+ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  +T+S+IGEGC++KNC+I HSV+G+RS I  G +IE++LLMGAD+Y+   +R+    +  +P+GIG ++ I+ AIIDKNARIG +VKIVN D+VQEA RE  G++I+SGIV ++K+A+IP GTII
Sbjct:  236 EIIPDASK-DYNVQAYLFDDYWEDIGTIEAFYHANLALTQQPQPPFSFYDEHAPIYTRARYLPPTKLLDCQITESIIGEGCILKNCRIQHSVLGVRSRIESGCVIEESLLMGADFYQASVERQCSLIENDIPVGIGTDTIIRGAIIDKNARIGHDVKIVNKDNVQEAERENQGFYIRSGIVVVLKNAVIPDGTII 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.111e-66
Identity = 118/195 (60.51%), Postives = 153/195 (78.46%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IP A      VQAYL+D YW DIGTIEAFY ANLG+TK+PIP FSFYD  APIYT+ RYLPP+K+L+ADVT+S+I EGC+IKNC+IHHSV+G+R+ +     IEDT++MGADYY+    R+    +G  PIGIG+ + I+RAIIDKNARIG NV IVN ++V+E+ RE  GY+I+SGI  ++K+A+IP GT+I
Sbjct:  236 EIIPDAAK-DYNVQAYLFDDYWADIGTIEAFYEANLGLTKQPIPPFSFYDEKAPIYTRARYLPPTKVLNADVTESMISEGCIIKNCRIHHSVLGIRTRVEADCTIEDTMIMGADYYQPYEKRQDCLRRGKPPIGIGEGTTIRRAIIDKNARIGKNVMIVNKENVEESNREELGYYIRSGITVVLKNAVIPDGTVI 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.807e-65
Identity = 115/195 (58.97%), Postives = 152/195 (77.95%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IPGA +    +QAYLY GYWEDIGTIEAFY +NL +T++P P FSFYD  APIYT+PRYLPP+K+L+  +T+S+I EGC++K+C+IHHSV+G+RS +     IED++LMGADYYE+   R+ +   G VP GIG  + I+RAIIDKNARIG NV I+N D ++EA RE +G+ I+SGIV +IK+A IP GT+I
Sbjct:  236 EIIPGAKT-DYNLQAYLYKGYWEDIGTIEAFYESNLALTQQPQPPFSFYDEKAPIYTRPRYLPPTKVLNCTITESMISEGCILKDCRIHHSVLGIRSRVESDCTIEDSMLMGADYYESSTKRKAVLEAGKVPQGIGAGTTIRRAIIDKNARIGRNVLIINKDRIEEAEREDEGFLIRSGIVVVIKNATIPDGTVI 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 5.258e-65
Identity = 108/195 (55.38%), Postives = 155/195 (79.49%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            EVIP A   G R+++Y++D YWEDIGTI AFY ANL +T++P P FSFYD   PIYT+PRYLPPSK++D+ +TDS+IGEG ++K+C IHHSV+G+RS + +  +++D+LLMG+D++E+ ++R  L  +G +P+G+GK + +KRAI+DKNARIG NV IVN D V+EA R   G++I++GIV ++K+A IP GT+I
Sbjct:  237 EVIPEALQRGDRLKSYVFDDYWEDIGTIGAFYEANLALTQQPTPPFSFYDAEFPIYTRPRYLPPSKLVDSQITDSIIGEGSILKSCSIHHSVLGVRSRVEDEVVLQDSLLMGSDFFESSSERAVLRERGGIPLGVGKGTTVKRAILDKNARIGSNVTIVNKDHVEEADRPEHGFYIRNGIVVVVKNASIPDGTVI 431          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.408e-64
Identity = 112/195 (57.44%), Postives = 156/195 (80.00%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IPGA      +QAYL+ GYWEDIGTIEAFY ANL + ++P P FSFY+  APIYT+ R LPP+K+L+ ++T+S+I EGC+IK+C+IH+SV+G+RS I    ++ED+LLMGADYYE+   R+ L  +G +P+GIGK S I+RAI+DKNARIG NV IVN ++++E+ RE DG++I++GIV +IK+A+IP GT+I
Sbjct:  236 EIIPGAAK-DYNLQAYLFKGYWEDIGTIEAFYEANLALNRQPRPSFSFYNEKAPIYTRARNLPPTKVLNCNITESMISEGCMIKDCRIHNSVLGIRSRIETDCVVEDSLLMGADYYESLETRQSLLDQGKIPVGIGKGSTIRRAIVDKNARIGQNVTIVNKENIEESNREDDGFYIRNGIVVVIKNAVIPDGTVI 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 7.592e-64
Identity = 117/195 (60.00%), Postives = 152/195 (77.95%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IP + S    +QAYL+D YWEDIGTIEAFY ANL +TK+P PDFSFY+  APIYT+ RYLPP+KML++ VT+S+IGEGC+IK C+IHHSV+G+RS I     IEDTL+MG D+YE+ ++R  L A+G +  GIG  + I+RAIIDKNARIG NV IVN ++VQEA RE  G++I++GIV +IK+  I  GT+I
Sbjct:  246 EIIPDSAS-DHNLQAYLFDDYWEDIGTIEAFYEANLALTKQPSPDFSFYNEKAPIYTRGRYLPPTKMLNSTVTESMIGEGCMIKQCRIHHSVLGIRSRIESDCTIEDTLVMGNDFYESSSERDTLKARGEIAAGIGSGTTIRRAIIDKNARIGKNVMIVNKENVQEANREELGFYIRNGIVVVIKNVTIADGTVI 439          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP4 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glgC PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.691e-63
Identity = 112/195 (57.44%), Postives = 153/195 (78.46%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            E+IP A +    VQ YL++ YWEDIGTI +FY ANL +T++P P FSFYD  APIYT+PRYLPPSK+LD  VT+S+IGEGC++KNC+I HSV+G+RS I  G +I++ LLMGAD+Y+  A+R       SVP+GIG ++ ++RAI+DKNA IG NVKIVN D V+EA RE++G++I++GIV ++K+A+IP  T+I
Sbjct:  236 EIIPMAAT-DHNVQTYLFNDYWEDIGTISSFYEANLALTRQPQPPFSFYDEKAPIYTRPRYLPPSKLLDCQVTESIIGEGCILKNCQIQHSVLGVRSRIESGCVIDNALLMGADFYQPFAERDHKIKNNSVPLGIGADTIVRRAIVDKNACIGRNVKIVNKDHVEEANRESEGFYIRNGIVVVLKNAVIPDNTVI 429          
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.899e-60
Identity = 111/195 (56.92%), Postives = 143/195 (73.33%), Query Frame = 1
Query:   13 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 597
            EVIP A +     QA+L++ YWEDIGTI +FY ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  VT S+IGEGC++K C + +SV+G+RS I    +I+D LLMGAD+YET   R    A G VP+GIG  S I+RAI+DKNA IG NV+IVN D V+EA RE  G+ I+SGIV ++K A+IP  T+I
Sbjct:  237 EVIPAAAT-RYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPPTKLLDCQVTQSIIGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGADFYETSELRHQNRANGKVPMGIGSGSTIRRAIVDKNAHIGQNVQIVNKDHVEEADREDLGFMIRSGIVVVVKGAVIPDNTVI 430          
The following BLAST results are available for this feature:
BLAST of EY728434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
GLGC_ANAVT5.081e-6861.03Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_ANASP1.132e-6761.03Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_NOSP72.788e-6659.49Glucose-1-phosphate adenylyltransferase OS=Nostoc ... [more]
GLGC_SYNP28.111e-6660.51Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAP71.807e-6558.97Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNPW5.258e-6555.38Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAA53.408e-6457.44Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNY37.592e-6460.00Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAP41.691e-6357.44Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNP63.899e-6056.92Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728434 ID=EY728434; Name=EY728434; organism=Citrus sinensis; type=EST; length=899bp
CACGCGTCCGGTGAAGTTATCCCTGGTGCAACTTCCATTGGGATGAGAGT
GCAAGCATATTTATATGATGGCTACTGGGAAGACATTGGAACAATTGAGG
CTTTCTACAATGCGAATCTGGGGATCACCAAAAAGCCAATTCCGGATTTC
AGCTTCTATGACCGTTCTGCTCCAATTTATACACAGCCTAGATATCTACC
TCCTTCTAAGATGCTTGATGCTGATGTCACTGATAGTGTAATTGGTGAAG
GCTGTGTGATTAAGAATTGCAAAATTCACCATTCTGTTGTTGGGCTTCGA
TCTTGCATATCAGAAGGTGCAATTATCGAAGATACTTTACTTATGGGAGC
AGATTATTATGAGACAGACGCGGACAGGAGGTTTTTGGCTGCAAAGGGTA
GTGTTCCAATTGGTATTGGCAAGAATTCTCACATCAAGAGAGCAATAATT
GACAAAAATGCTCGAATTGGGGATAATGTGAAGATCGTCAACAGTGACAG
TGTGCAAGAAGCAGCAAGGGAAACAGATGGATACTTCATCAAGAGCGGGA
TTGTCACAATAATCAAGGATGCCTTGATTCCCAGTGGAACCATAATCTAN
ACTGTCGTCTTCTCAGTTTCATCCCAAGCTGCGCTGCTGCGGGTACCTTC
CCCTCTATGCTCGAGAATGTCGTAATCTNCAGTCTGCTTCCACTTTACCT
TTGGCCATCTTTTTGCTATAAGCTGTATATTTCCGGGCAGTGTAATGTAA
TTATGAGAGGAATATANGACCTGGAANAANGGACATGCTGTAAAGGTCTA
NTTATGCAAAAATAAATCTTTCATTCTAATGTCTGCTTCTTNNNNNNAAN
NNNNNNNNNNNNNNNNNNNNNAAAGGCGGCCCCTCTAAAAGATCCACCC
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