EY728434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_THEP1 (Glucose-1-phosphate adenylyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 48/183 (26.23%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 55 AYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTII-KDALIPSGTII 597 A+ +DGYW D+GT+ +++ ANL + P+P F+ YD + +T +PP+ + + V+ S++ EG + + +SV+ I G +++++++M T A+ IG+N +++ II ++ +IG+NV++ V E A + SG++T++ +++IP +I Sbjct: 235 AFRFDGYWRDVGTLRSYWEANLELV-LPVPPFNLYDPNWRFFTHTEEMPPAYVAPGSKVSTSLVSEGAEVYG-NVFNSVIFQGVKIGRGTVVKNSVIM------TRAE-------------IGENCYLENVIIAESVKIGNNVRM----GVGEDAENKLDPKVYSGLLTVVGMNSVIPDDMVI 392
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_MYCSS (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium sp. (strain MCS) GN=glgC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.318e-12 Identity = 48/169 (28.40%), Postives = 82/169 (48.52%), Query Frame = 1 Query: 10 GEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIG 471 G++IP S GM A +YD GYW D+GT++AFY+A++ + P F+ Y++ PI + L P+K ++ +SV+G G +I + +SV+ I +GAI+E +++M IG+ + ++ AI+DKN +G Sbjct: 227 GDIIPRLVSDGM---AAVYDFSNNEVPGATERDHGYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNKRWPIRGESENLAPAKFVNGGSAQESVVGAGSIISAASVRNSVLSSNVYIDDGAIVEGSVIMPG-------------------TRIGRGAVVRHAILDKNVVVG 372
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_MYCGI (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium gilvum (strain PYR-GCK) GN=glgC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12 Identity = 47/169 (27.81%), Postives = 82/169 (48.52%), Query Frame = 1 Query: 10 GEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIG 471 G++IP + GM A +YD GYW D+GT++AFY+A++ + P F+ Y++ PI L P+K ++ +SV+G G +I + +SV+ I +GAI+E +++M + IG+ + ++ AI+DKN +G Sbjct: 227 GDIIPRLVADGM---ASVYDFNNNEVPGATERDHGYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNKRWPIRGGAENLAPAKFVNGGSAQESVVGAGSIISAASVRNSVLSSNVAIDDGAIVEGSVIMPG-------------------VRIGRGAVVRHAILDKNVVVG 372
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_STRGC (Glucose-1-phosphate adenylyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 16 VIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 504 VIP G V AY + GYW+D+GT+E+ + AN+ P +R IY++ PP+ + + A V DS++ +GC + + HS++ + + + A+IED+++M G++ IG+ + IKRAII + A I + V+I ++ V Sbjct: 222 VIPNYLESGESVYAYEFAGYWKDVGTVESLWEANMEYI-NPENALDSRNRRWKIYSRNLISPPNFLSENAKVEDSLVVDGCFVDG-TVKHSILSTGAQVRKDAVIEDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIIAEGVEIDGTEEV 364
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_NITEU (Glucose-1-phosphate adenylyltransferase OS=Nitrosomonas europaea GN=glgC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12 Identity = 48/209 (22.97%), Postives = 95/209 (45.45%), Query Frame = 1 Query: 13 EVIPGATSIGMRVQAYLYDG----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIKDALIPSG 588 +VIP + RV A+ + YW D+GT++A++ AN+ +T PD + YD PI+T LPP+K + D DS++ GC+I + S++ I + IED++++ + I +++++KR +++K +I + +K+ N D + +++ +T+I ++ G Sbjct: 246 DVIPRLVASNARVYAHRFQNSCVNMASGVPYWRDVGTVDAYWKANIDLT-TITPDLNLYDEDWPIWTHQEQLPPAKFVFDDDDRRGQALDSMVSGGCIISGATVRRSLLFSNVQIRGYSTIEDSVIL-------------------PNVSIDRHAYLKRVVVEKECQIPEGLKVGFNPD------EDRKHFYVTDDGITLITPEMLGQG 428
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_GEOMG (Glucose-1-phosphate adenylyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 1 Query: 70 GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK-MLDAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFI-KSGIVTI 561 GYW+D+GTI+++Y AN+ + P + Y+ PI T PP+K + D D DS + GC+ + S+VG + ++ +++ED++L +E + +G+N I+RAIIDKN I D I D ++ R GY + +SGIV + Sbjct: 262 GYWKDVGTIDSYYEANMELIHVS-PQLNLYNYKWPILTNQGNYPPAKTVFDEDGRRGMNIDSYVCAGCITSGSVVRRSIVGPLTKVNSYSLVEDSIL-----FEN--------------VNVGRNVKIRRAIIDKNITIPDGTTI-GYDHGEDRRR---GYTVTESGIVVV 408
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_CLONN (Glucose-1-phosphate adenylyltransferase OS=Clostridium novyi (strain NT) GN=glgC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 56/188 (29.79%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 16 VIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI--TKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKD 570 +IP G + AY ++GYW+D+GTIE+ + AN+ + TK P+ Y+++ IY+ PP +A + +S++ EGC + KI +SV+ + +II+D+++M + IG+N I++ II N I +N I NSD + DG IK+ +IIK+ Sbjct: 223 IIPSLLDSGYNLYAYSFNGYWKDVGTIESLWQANMDLLDTKNPL---DIYNKNWKIYSVSPSKPPQYTGPNAIIQNSLVVEGCAVFG-KIQNSVLFPEVEVGSNSIIQDSVIMS-------------------NVKIGQNVIIRKCIIGSNTIIENNSVIGNSDDITVIG---DGEKIKTN--SIIKN 382
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_ACTSZ (Glucose-1-phosphate adenylyltransferase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12 Identity = 41/143 (28.67%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 73 YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD-----VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 486 YW D+GT+++++ +N+ + K P YD++ PI P PSK D V +S+I GCVI N I +SV+ ++EG +I++++++ + +GKN +KR I+D++ +I D ++I Sbjct: 268 YWRDVGTLDSYWQSNIDLVSKE-PQLDIYDQTWPIRGNPVQAYPSKFFYDDPACKQVDNSLIAGGCVITNASISYSVLFDNIHVNEGTLIDESVIL-------------------PQVKVGKNCILKRCIVDRHVQIPDGMQI 390
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_THEYD (Glucose-1-phosphate adenylyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgC PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 45/147 (30.61%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 49 VQAYLYDGYWEDIGTIEAFYNANLGIT-KKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 486 +++Y GYW D+GTI A+++A++ + +KPI F Y++ PI+ PP K+LD ++ +S+I EG +I KI +S + S I + I+D+L+M + I +NS + R I+DK + + KI Sbjct: 249 IKSYEERGYWRDVGTISAYFDAHMDMLGEKPI--FEIYNKMWPIHPARYEGPPVKILDGEIKNSIIAEGALIYGGKIENSFIRSGSIIEKDVEIKDSLIMD-------------------DVIIKRNSKLYRVIVDKKNVVYEGEKI 374
BLAST of EY728434 vs. ExPASy Swiss-Prot
Match: GLGC_COREF (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium efficiens GN=glgC PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 53/194 (27.32%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 7 SGEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPR-YLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGYFIKSGIVTIIKDALI 579 S ++PGAT GYW D+GTI+AFY ++ + P F+ Y++ PI+T LPP+K + + S++ G +I + +SV+ + EGA +E +LM + IGK + ++ AI+DKN + D I V+ D + + + G G+VT+ K+ ++ Sbjct: 249 SRNIVPGATERDK--------GYWRDVGTIDAFYECHMDLISVH-PIFNLYNKEWPIHTTVEGNLPPAKFVQGGIAQSSMVAPGSIISAGTVRNSVLSTDVIVEEGATVEGAVLMPG-------------------VRIGKGAVVRHAILDKNVVVRDGELIGVDHDRDSQRFKVSAG-----GVVTVGKNQVV 409 The following BLAST results are available for this feature:
BLAST of EY728434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728434 ID=EY728434; Name=EY728434; organism=Citrus sinensis; type=EST; length=899bpback to top |