EY728433

Overview
NameEY728433
Unique NameEY728433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_VIBPA (Protein apaG OS=Vibrio parahaemolyticus GN=apaG PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 4.245e-12
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  378 LSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITD 521
            + + V  +++ EQS+P  Q+FVFAY + I N  +   Q+ISR W+ITD
Sbjct:    8 IKIQVHTKYIEEQSNPELQRFVFAYVITIKNLSQQTVQLISRRWLITD 55          

HSP 2 Score: 40.817 bits (94), Expect = 4.245e-12
Identity = 20/48 (41.67%), Postives = 24/48 (50.00%), Query Frame = 2
Query:  542 VRGLGVVGXQPLLAPGENFELTXGCPLPTPVGTMGGAYHCFXENGIPF 685
            V G GVVG QP +   + +  + G  L TPVG M G Y    E G  F
Sbjct:   63 VEGEGVVGQQPFIPSNDEYTYSSGTALETPVGVMQGHYKMLDEKGQEF 110          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_THIDA (Protein apaG OS=Thiobacillus denitrificans (strain ATCC 25259) GN=apaG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 3
Query:  366 KPYDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITDGTSACRKCAGWAWSAXSPCWRPAKT 596
            K Y +++SV+  ++ EQSDP   ++VFAYT+ I N G   AQ+ISRHW+ITD     ++  G       P  RP +T
Sbjct:    5 KKYQINISVNTAYLAEQSDPSADRYVFAYTITIENVGTVAAQLISRHWVITDADDVVQEVKGLGVVGEQPLLRPGET 81          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_AZOVD (Protein apaG OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=apaG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 3
Query:  372 YDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITDGTSACRKCAGWAWSAXSPCWRPAKTSN 602
            Y + VSV  R++PEQS P + ++VFAY+V I N G  PAQ++SRHW+ITDG    ++  G       P   P ++ N
Sbjct:    6 YQIDVSVETRYLPEQSQPEQNRYVFAYSVTIRNNGLLPAQLLSRHWLITDGDGHVQEVRGPGVIGTQPLLGPGQSHN 82          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_NITEU (Protein apaG OS=Nitrosomonas europaea GN=apaG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 3
Query:  366 KPYDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITDGTSACRKCAGWAWSAXSPCWRPAKT 596
            + Y + V V   ++P+QSDP  +++VFAYT+ I NTG   +Q++SRHWIIT G    R+  G       P  +P +T
Sbjct:    5 RKYSIKVEVRTIYLPDQSDPEAERYVFAYTITINNTGSVASQLVSRHWIITSGDGVTREVRGLGVVGEQPLLKPGET 81          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_WOLWR (Protein apaG OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=apaG PE=3 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 9.206e-12
Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 3
Query:  354 ERTVKPYDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITDGTSACRKCAG 551
            E T+    + V+V P ++ EQS P E  +V+ Y V+I N  +   Q++SRHW I D      + AG
Sbjct:    3 EYTLTTNFVEVTVLPIYIEEQSIPYENCYVWMYNVKIKNKSQSTIQLLSRHWQIIDYKGKVNEIAG 68          

HSP 2 Score: 44.669 bits (104), Expect = 9.206e-12
Identity = 21/50 (42.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  530 RVQEVRGLGVVGXQPLLAPGENFELTXGCPLPTPVGTMGGAYHCFXENGI 679
            +V E+ G+GV+G QP++  GE F+ T G  L  P G M G Y    E  I
Sbjct:   62 KVNEIAGVGVIGEQPVIKSGEVFKYTSGTYLNVPSGIMQGKYEFLNEESI 111          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_WOLPM (Protein apaG OS=Wolbachia pipientis wMel GN=apaG PE=3 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 9.206e-12
Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 3
Query:  354 ERTVKPYDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITDGTSACRKCAG 551
            E T+    + V+V P ++ EQS P E  +V+ Y V+I N  +   Q++SRHW I D      + AG
Sbjct:    3 EYTLTTNFVEVTVLPIYIEEQSIPYENCYVWMYNVKIKNKSQSTIQLLSRHWQIIDYKGKVNEIAG 68          

HSP 2 Score: 44.669 bits (104), Expect = 9.206e-12
Identity = 21/50 (42.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  530 RVQEVRGLGVVGXQPLLAPGENFELTXGCPLPTPVGTMGGAYHCFXENGI 679
            +V E+ G+GV+G QP++  GE F+ T G  L  P G M G Y    E  I
Sbjct:   62 KVNEIAGVGVIGEQPVIKSGEVFKYTSGTYLNVPSGIMQGKYEFLNEESI 111          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_PHOPR (Protein apaG OS=Photobacterium profundum GN=apaG PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 9.303e-12
Identity = 21/51 (41.18%), Postives = 36/51 (70.59%), Query Frame = 3
Query:  369 PYDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITD 521
            P  +  +V   ++ EQS+P  Q++VF+YT+ I N G+  A+++SR+W+ITD
Sbjct:    6 PPTIKCNVVTHYIEEQSEPNNQRYVFSYTITIRNLGKGSAKLLSRYWLITD 56          

HSP 2 Score: 37.7354 bits (86), Expect = 9.303e-12
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 2
Query:  542 VRGLGVVGXQPLLAPGENFELTXGCPLPTPVGTMGGAYHCFXENGIPFE 688
            + G GVVG QP +   E +  T G  + TP+G M G Y    E+G  F+
Sbjct:   64 IEGEGVVGEQPEIKMNEEYTYTSGTIIETPLGVMQGHYVMGTEDGETFK 112          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_METFK (Protein apaG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=apaG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12
Identity = 35/76 (46.05%), Postives = 44/76 (57.89%), Query Frame = 3
Query:  366 KPYDLSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITDGTSACRKCAGWAWSAXSPCWRPAK 593
            K Y  SV V   FVP+QSD  + ++VF YTV I NTG   AQ+ISRHWIITD T   ++  G       P  +P +
Sbjct:    5 KRYAFSVKVETAFVPDQSDVEQNRYVFTYTVHIENTGNVAAQLISRHWIITDATGKTQEVRGLGVIGQQPLLQPGE 80          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_VIBHB (Protein apaG OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=apaG PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 1.208e-11
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  378 LSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITD 521
            + + V  +++ EQS+P  Q++VFAY + I N  +   Q+ISR W+ITD
Sbjct:    8 IKIQVHTKYIEEQSNPELQRYVFAYVITIKNLSQQTVQLISRRWLITD 55          

HSP 2 Score: 40.4318 bits (93), Expect = 1.208e-11
Identity = 20/48 (41.67%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  542 VRGLGVVGXQPLLAPGENFELTXGCPLPTPVGTMGGAYHCFXENGIPF 685
            V G GVVG QP ++  + +  + G  L TPVG M G Y    E G  F
Sbjct:   63 VEGEGVVGQQPFISGSDEYTYSSGTALETPVGVMQGHYILLDEKGNEF 110          
BLAST of EY728433 vs. ExPASy Swiss-Prot
Match: APAG_SHEWM (Protein apaG OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=apaG PE=3 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 1.208e-11
Identity = 16/48 (33.33%), Postives = 31/48 (64.58%), Query Frame = 3
Query:  378 LSVSVSPRFVPEQSDPGEQQFVFAYTVRITNTGEHPAQVISRHWIITD 521
            + + V   ++ +QS P +++++F YT+ I N G+ P  + +R+W ITD
Sbjct:    8 IKIDVKTEYIEDQSSPNDERYLFRYTITIINLGKEPVTLKTRYWSITD 55          

HSP 2 Score: 43.8986 bits (102), Expect = 1.208e-11
Identity = 22/55 (40.00%), Postives = 29/55 (52.73%), Query Frame = 2
Query:  524 HQRVQEVRGLGVVGXQPLLAPGENFELTXGCPLPTPVGTMGGAYHCFXENGIPFE 688
            +Q +  V+G GVVG  P + P   ++ T G  L TP G M G Y    ENG  F+
Sbjct:   57 NQHLSVVQGAGVVGETPTIEPDTAYQYTSGTVLETPFGVMEGNYGMVTENGEMFK 111          
The following BLAST results are available for this feature:
BLAST of EY728433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
APAG_VIBPA4.245e-1243.75Protein apaG OS=Vibrio parahaemolyticus GN=apaG PE... [more]
APAG_THIDA5.654e-1241.56Protein apaG OS=Thiobacillus denitrificans (strain... [more]
APAG_AZOVD5.654e-1242.86Protein apaG OS=Azotobacter vinelandii (strain DJ ... [more]
APAG_NITEU7.385e-1240.26Protein apaG OS=Nitrosomonas europaea GN=apaG PE=3... [more]
APAG_WOLWR9.206e-1236.36Protein apaG OS=Wolbachia sp. subsp. Drosophila si... [more]
APAG_WOLPM9.206e-1236.36Protein apaG OS=Wolbachia pipientis wMel GN=apaG P... [more]
APAG_PHOPR9.303e-1241.18Protein apaG OS=Photobacterium profundum GN=apaG P... [more]
APAG_METFK9.645e-1246.05Protein apaG OS=Methylobacillus flagellatus (strai... [more]
APAG_VIBHB1.208e-1141.67Protein apaG OS=Vibrio harveyi (strain ATCC BAA-11... [more]
APAG_SHEWM1.208e-1133.33Protein apaG OS=Shewanella woodyi (strain ATCC 519... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728433 ID=EY728433; Name=EY728433; organism=Citrus sinensis; type=EST; length=691bp
TGGCGGCTGGCTTCCGGGTGGAAGCTGATGTAGTTGGCGCCGGCCTTGGC
GAACATCGGCACCAGGGCGTCCACCGGCTCGACCATGAGGTGCACGTCGA
TCGGCACGGAAACATGGGGACGGATCGCCGCGCAGACCATCGGGCCGATG
GTCAGGTTGGGCACGTAGTGGTTGTCCATCACATCGAAATGGATCCAGTC
GGCGCCGGCGGCGACGACGTCACGCACTTCCTCGCCCAGGCGGGCGAAGT
CGGCGGACAGGATGCTGGGGGTGATGCGGGTGGTGGTAGGCATGGCGTTC
GGGGTGGGTGAAGGCATAATGTGCCATTATTGCAGCTTGCTCGTGCCACA
CAGGAAAGGACTGTGAAACCCTACGACCTGAGCGTCTCCGTCTCGCCGCG
CTTCGTGCCAGAACAGTCCGATCCGGGTGAGCAGCAGTTCGTGTTCGCCT
ATACCGTCCGCATCACCAATACCGGCGAGCATCCGGCCCAGGTGATCAGC
CGCCACTGGATTATCACCGATGGCACCAGCGCGTGCAGGAAGTGCGCGGG
CTGGGCGTGGTCGGCCANCAGCCCCTGCTGGCGCCCGGCGAAAACTTCGA
ACTAACCANCGGCTGTCCCCTCCCCACCCCGGTCGGGACGATGGGCGGCG
CCTACCATTGCTTCNGCGAAAACGGGATCCCGTTCGAANTG
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