EY728431

Overview
NameEY728431
Unique NameEY728431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_ACIAN (Citrate synthase OS=Acinetobacter calcoaceticus subsp. anitratus GN=gltA PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 67/229 (29.26%), Postives = 103/229 (44.98%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD--------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECG--ENVQRSS*KICLENIEYLQGVPGFG 836
            G++P+ EQ      ++R    V D V +  +     AHPM      V AL          E   H+          ++ LIA++P +AA+ Y+       I P++D L+Y  NF HM+           +P +   M    T+H+DHE  N S  T  L  S  ++PY   +A ++ L GP HG AN+ VL     ++DE G  ENV     K+  + ++ +    GFG
Sbjct:   95 GELPTAEQKVEFDAKVRAHTMVHDQVSRFFNGFRRDAHPMAIMVGVVGALSAFYHNNLDIEDINHREI-------TAIRLIAKIPTLAAWSYKYTVGQPFIYPRND-LNYAENFLHMMFATPADRDYKVNPVLARAMDRIFTLHADHEQ-NASTSTVRLAGSTGANPYACISAGISALWGPAHGGANEAVL----KMLDEIGSVENVAEFMEKVKRKEVKLM----GFG 306          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CYSZ_CUCMA (Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 51/196 (26.02%), Postives = 90/196 (45.92%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            G +PS+ Q+      +   + VP  +   I A+P  AHPM    S + AL V         +G    K  +   +    +I + P +AA  Y R+     ++P   +L Y  NF +ML          +P++  ++ +   +H++HE    ++   HL +S + D + + + A+  L GPLHG AN+ VL  +  +
Sbjct:  150 GNLPSQSQLADWEFAISQHSAVPQGLVDIIQAMPHDAHPMGVLVSAMSALSVFHPDANPALRGQDLYKSKQVRDKQIARIIGKAPTIAAAAYLRLAGRPPVLP-SSNLSYSENFLYMLDSLGNRSYKPNPRLARVLDILFILHAEHEMNCSTSAARHLASSGV-DVFTALSGAVGALYGPLHGGANEAVLKMLSEI 343          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: PRPC_SALTY (2-methylcitrate synthase OS=Salmonella typhimurium GN=prpC PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.793e-13
Identity = 59/224 (26.34%), Postives = 104/224 (46.43%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKML--ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIK---SVVDECGENVQRSS*KICLENIEYLQGVPGFG 836
            GK+P++++++    +L+    +P  V   ++ALP  +HPM    +GV AL      +E +              + +  L+A +  +  Y Y   +   +I P+ D    GG+F H+L  + P     + M + + ++++HE  N S  T  ++A   SD Y +   A+  L GP HG AN EV L I+      DE   ++++         +E  + V GFG
Sbjct:   68 GKLPTRDELNAYKSKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTV--------SGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAIIGAIGALRGPKHGGAN-EVSLEIQQRYETPDEAEADIRK--------RVENKEVVIGFG 273          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: PRPC_ECOLI (2-methylcitrate synthase OS=Escherichia coli (strain K12) GN=prpC PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-12
Identity = 59/224 (26.34%), Postives = 103/224 (45.98%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKML--ELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIK---SVVDECGENVQRSS*KICLENIEYLQGVPGFG 836
            GK+P+++++     +L+    +P  V   ++ALP  +HPM    +GV AL      +E +              + +  L+A +  +  Y Y   +   +I P+ D    GG+F H+L  + P     + M + + ++++HE  N S  T  ++A   SD Y +   A+  L GP HG AN EV L I+      DE   ++++         +E  + V GFG
Sbjct:   68 GKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTV--------SGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGAN-EVSLEIQQRYETPDEAEADIRK--------RVENKEVVIGFG 273          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_HELPJ (Citrate synthase OS=Helicobacter pylori J99 GN=gltA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.736e-12
Identity = 65/210 (30.95%), Postives = 99/210 (47.14%), Query Frame = 3
Query:  177 TGKVPSKEQVDGLS--KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED-SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD--------------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVD 752
            TG++P K Q + L    ELR R+ V + +     A P  AHPM + +SGV  L              H++ + E  Y+  +  ++A++P +AA  Y R      II  D +  Y  N   ML G+                P  +E     +T+H+DH G N S+ T   VAS    PY + +A ++ L G LHG AN++VLL ++ + D
Sbjct:   91 TGELP-KNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYS--------THQNMHTEEDYQTMARRIVAKIPTLAAICY-RNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVGITPLEVEAFDKILTLHADH-GQNASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGD 289          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_DEIRA (Citrate synthase OS=Deinococcus radiodurans GN=gltA PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.267e-12
Identity = 61/218 (27.98%), Postives = 101/218 (46.33%), Query Frame = 3
Query:  183 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDP--KMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVQRSS*KIC--LENIEYLQGV 824
            K+P+ E++     EL+    +PD +   I  +P   HPM    + V  L +     E       ++         S  +IA+   + A + +       + P+ D L + GNF +ML  ++P  +   L  + + +H+DH G N S  T    +S LSD Y    +A+  L GPLHG AN+ V+    +++DE G  V ++   I   L+N E + GV
Sbjct:   55 KLPTAEELAKFDAELKANRAIPDQLVGIIRDMPKGVHPMQALRTAVSYLGLLDPQAEDITPEARRAI--------STRMIAQFSTIIAAINRAQEGQDIVAPRAD-LTHAGNFLYMLTGNEPTPEQARLFDIALVLHADH-GMNASTFTAIATSSTLSDMYSCMVSAIGALKGPLHGGANEAVM----TMLDEIG-TVDKAEAYITGKLDNKEKIMGV 257          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_ACEAC (Citrate synthase OS=Acetobacter aceti GN=aarA PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 58/212 (27.36%), Postives = 94/212 (44.34%), Query Frame = 3
Query:  120 PAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED--SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVL 728
            P A+ D              G++P+K Q D  +  L +   + + +    +     AHPM      V AL   + + +A +  I       P   D  ++ LIA++P +AA+ Y+    +  I P++D L+Y  NF  M+          +P +   M   + +H+DHE  N S  T  L  S  ++P+   AA +  L GP HG AN+ VL
Sbjct:   80 PIAQLDENASYEEVIYLLLNGELPNKVQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALS--AFYPDANDIAI-------PANRDLAAMRLIAKIPTIAAWAYKYTQGEAFIYPRND-LNYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHEQ-NASTSTVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVL 280          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_PYRFU (Citrate synthase OS=Pyrococcus furiosus GN=gltA PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFDDPKMLE-LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVL 728
            GK+PS  +++   KEL     +P  V + ++ALP   HPM    + +  L       ++ +  +      E  Y   +++ A++P + A  Y RI    + +P  + L +  NF +ML G + PK  E  M + + ++++HE  N S      V S LSD Y +  A +  L GP+HG A +E +
Sbjct:   57 GKLPSLSELENFKKELAKSRGLPKEVIEIMEALPKNTHPMGALRTIISYL---GNIDDSGDIPVTP----EEVYRIGISVTAKIPTIVANWY-RIKNGLEYVPPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAI 232          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_HELPY (Citrate synthase OS=Helicobacter pylori GN=gltA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 64/210 (30.48%), Postives = 98/210 (46.67%), Query Frame = 3
Query:  177 TGKVPSKEQVDGLS--KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYED-SLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHML-GFD--------------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVD 752
            TG++P K Q + L    ELR R+ V + +     A P  AHPM + +SGV  L              H++ + E  Y+  +  ++A++P +AA  Y R      II  D +  Y  N   ML G+                P  +E     +T+H+DH   N S+ T   VAS    PY + +A ++ L G LHG AN++VLL ++ + D
Sbjct:   91 TGELP-KNQDESLEFELELRHRSFVHESLLNMFSAFPSNAHPMAKLSSGVSILSTLYS--------THQNMHTEEDYQTMARRIVAKIPTLAAICY-RNEVGAPIIYPDIARSYVENILFMLRGYPYSRLKHTTQGEVEITPLEVEAFDKILTLHADHSQ-NASSTTVRNVASTGVHPYAAISAGISALWGHLHGGANEKVLLQLEEIGD 289          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICJA (Citrate synthase (Fragment) OS=Rickettsia japonica GN=gltA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 64/239 (26.78%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V D ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   59 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNDRLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPYTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI 277          
The following BLAST results are available for this feature:
BLAST of EY728431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
CISY_ACIAN2.051e-1329.26Citrate synthase OS=Acinetobacter calcoaceticus su... [more]
CYSZ_CUCMA4.568e-1326.02Citrate synthase, glyoxysomal OS=Cucurbita maxima ... [more]
PRPC_SALTY7.793e-1326.342-methylcitrate synthase OS=Salmonella typhimurium... [more]
PRPC_ECOLI1.736e-1226.342-methylcitrate synthase OS=Escherichia coli (stra... [more]
CISY_HELPJ1.736e-1230.95Citrate synthase OS=Helicobacter pylori J99 GN=glt... [more]
CISY_DEIRA2.267e-1227.98Citrate synthase OS=Deinococcus radiodurans GN=glt... [more]
CISY_ACEAC5.051e-1227.36Citrate synthase OS=Acetobacter aceti GN=aarA PE=1... [more]
CISY_PYRFU8.616e-1228.65Citrate synthase OS=Pyrococcus furiosus GN=gltA PE... [more]
CISY_HELPY8.616e-1230.48Citrate synthase OS=Helicobacter pylori GN=gltA PE... [more]
CISY_RICJA1.125e-1126.78Citrate synthase (Fragment) OS=Rickettsia japonica... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728431 ID=EY728431; Name=EY728431; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGGCGGGATGAGAGGAATGACTGGCTTACTTTGGGAAACC
TCATTACTTGACCCTGATGAGGGAATTCGCTTTCGGGGTCTGTCTATTCC
TGAGTGCCAGAAGTTGTTACCTGCCGCTAAGCCAGATGGAGAACCTTTGC
CTGAGGGTCTTCTTTGGCTTCTTTTAACTGGAAAGGTACCGAGCAAAGAG
CAGGTCGATGGCTTGTCCAAGGAATTGAGAGATCGTGCCACTGTCCCAGA
TTATGTGTACAAGGCCATTGATGCTCTACCTGTAACGGCACATCCGATGA
CTCAGTTTGCTAGTGGGGTCATGGCTCTGCAGGTGCAAAGTGAATTTCAG
GAGGCTTATGAGAAGGGAATTCATAAATCAAAGTACTGGGAACCAACATA
TGAGGATTCTCTTAATTTGATTGCTCGTGTGCCGGTAGTAGCTGCGTACG
TTTATCAAAGGATATACAAGGATGGAAAGATTATTCCCAAGGATGACTCA
CTGGATTATGGTGGGAACTTCTCGCACATGTTGGGATTCGATGATCCTAA
GATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACCACGAAG
GTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCACTTTCA
GATCCTTATCTTTCTTTTGCTGCCGCATTAAATGGTTTAGCTGGACCACT
CCATGGTTTGGCTAATCAGGAAGTTTTGCTTTGGATCAAATCTGTGGTGG
ATGAGTGTGGTGAGAACGTACAACGGAGCAGTTGAAAGATATGTCTGGAA
AACATTGAATATTTGCAGGGTGTCCCTGGATTTGGCCTGGTGTTTTGCGT
AAAATGATCCGAAATACCCTGTCAAAGGGAGTTGCCTT
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