EY728431

Overview
NameEY728431
Unique NameEY728431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3742 contig Csv1_Contig3742:344..1233. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_THIFE (Citrate synthase OS=Thiobacillus ferrooxidans GN=gltA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11
Identity = 59/208 (28.37%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQV---QSEFQEAYEKG--IHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV--VDECGENVQR 776
            G +P    ++     LR    V   V + +  +PVT HPM      V +L +   Q E  +A E+G  +H           ++ +IAR+P + A   Q  + +  I P+ D L +  NF +ML     DP   +++   + +H++H   N S  +  +  S L++PY     A+  LAGPLHG ANQ+V+  ++ +  V + G  + R
Sbjct:   56 GVLPGAADLERFDHGLRAHRQVKYNVREIMKFMPVTGHPMDMLHCAVASLGMFYPQQELSDA-ERGNTLHLDAM-------AMRIIARMPTIVAMWEQMRFGNDPISPRPD-LSHAANFLYMLSGREPDPAHTKILDSCLILHAEHTI-NASTFSVLVTGSTLTNPYHVIGGAIGTLAGPLHGGANQKVVEMLEEISSVQQVGAYLDR 253          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICCN (Citrate synthase OS=Rickettsia conorii GN=gltA PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 64/239 (26.78%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  IK +
Sbjct:   66 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMIKEI 284          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICCA (Citrate synthase (Fragment) OS=Rickettsia canadensis GN=gltA PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 63/239 (26.36%), Postives = 109/239 (45.61%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R+RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   59 IDGDKGILRYRGYDIKDL-----ADKSDFLEVAYLLIY----GELPSSEQYNNFTKKVAVHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTMAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCMKYEVNPVIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI 277          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY3_BACSU (2-methylcitrate synthase OS=Bacillus subtilis GN=mmgD PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 50/185 (27.03%), Postives = 91/185 (49.19%), Query Frame = 3
Query:  180 GKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFDDPKMLE--LMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVL 728
            G++P + +++ L +++   +++P    + ++ LP   HPM    +G+ AL         Y++ I   +      E +  L+ ++P + A  Y+ I K   I+P   +L Y  NF +M+    P  LE  +    + ++S+HE  N S     ++AS  SD Y +   A+  L G LHG AN+ V+
Sbjct:   57 GRLPEESEMETLERKINSASSLPADHLRLLELLPEDTHPMDGLRTGLSALA-------GYDRQID-DRSPSANKERAYQLLGKMPALTAASYRIINKKEPILPLQ-TLSYSANFLYMMTGKLPSSLEEQIFDRSLVLYSEHEMPN-STFAARVIASTHSDLYGALTGAVASLKGNLHGGANEAVM 231          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY2_BACSU (Citrate synthase 2 OS=Bacillus subtilis GN=citZ PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 52/193 (26.94%), Postives = 91/193 (47.15%), Query Frame = 3
Query:  183 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPV-TAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYG--GNFSHMLGFDDPKMLEL--MRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            ++P+K++++ L ++L   A VP  + +   +  +   HPM    + +  L +     +            E  Y  ++ L A+VP + A  + RI K   + P +   DYG   NF + L  ++P  +E+      + +H+DHE  N S  T  +  + LSD Y    AA+  L GPLHG AN+ V+  +  +
Sbjct:   52 RLPNKKELEELKQQLAKEAAVPQEIIEHFKSYSLENVHPMAALRTAISLLGLLDSEADTMNP--------EANYRKAIRLQAKVPGLVA-AFSRIRKG--LEPVEPREDYGIAENFLYTLNGEEPSPIEVEAFNKALILHADHEL-NASTFTARVCVATLSDIYSGITAAIGALKGPLHGGANEGVMKMLTEI 232          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICSL (Citrate synthase (Fragment) OS=Rickettsia slovaca GN=gltA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 63/239 (26.36%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   59 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI 277          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICSI (Citrate synthase (Fragment) OS=Rickettsia sibirica GN=gltA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 63/239 (26.36%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   59 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI 277          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICPA (Citrate synthase (Fragment) OS=Rickettsia parkeri GN=gltA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 63/239 (26.36%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   59 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI 277          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICAE (Citrate synthase OS=Rickettsia africae (strain ESF-5) GN=gltA PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 63/239 (26.36%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   66 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYTVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEAVINMLKEI 284          
BLAST of EY728431 vs. ExPASy Swiss-Prot
Match: CISY_RICRH (Citrate synthase (Fragment) OS=Rickettsia rhipicephali GN=gltA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 63/239 (26.36%), Postives = 108/239 (45.19%), Query Frame = 3
Query:   57 LDPDEGI-RFRGLSIPECQKLLPAAKPDXXXXXXXXXXXXXTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYE-DSLNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGFD-------DPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSV 746
            +D D+GI R RG  I +      A K D              G++PS EQ +  +K++   + V + ++        ++HPM    + V +L        A+   +   K  E  YE  ++ +IA++P +AA  Y+       I P D+SLD+  NF HM+          +P +   +     +H+DHE  N S  T  +  S+ ++P+   +  +  L GP HG AN+ V+  +K +
Sbjct:   59 IDGDKGILRHRGYDIKDL-----AEKSDFLEVAYLLIY----GELPSGEQYNNFTKQVAHHSLVNERLHYLFQTFCSSSHPMAIMLAAVGSLS-------AFYPDLLNFK--EADYELTAIRMIAKIPTIAAMSYKYSIGQPFIYP-DNSLDFTENFLHMMFATPCTKYKVNPIIKNALNKIFILHADHEQ-NASTSTVRIAGSSGANPFACISTGIASLWGPAHGGANEVVINMLKEI 277          
The following BLAST results are available for this feature:
BLAST of EY728431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
CISY_THIFE1.470e-1128.37Citrate synthase OS=Thiobacillus ferrooxidans GN=g... [more]
CISY_RICCN1.919e-1126.78Citrate synthase OS=Rickettsia conorii GN=gltA PE=... [more]
CISY_RICCA2.507e-1126.36Citrate synthase (Fragment) OS=Rickettsia canadens... [more]
CISY3_BACSU2.507e-1127.032-methylcitrate synthase OS=Bacillus subtilis GN=m... [more]
CISY2_BACSU2.507e-1126.94Citrate synthase 2 OS=Bacillus subtilis GN=citZ PE... [more]
CISY_RICSL3.274e-1126.36Citrate synthase (Fragment) OS=Rickettsia slovaca ... [more]
CISY_RICSI3.274e-1126.36Citrate synthase (Fragment) OS=Rickettsia sibirica... [more]
CISY_RICPA3.274e-1126.36Citrate synthase (Fragment) OS=Rickettsia parkeri ... [more]
CISY_RICAE3.274e-1126.36Citrate synthase OS=Rickettsia africae (strain ESF... [more]
CISY_RICRH4.276e-1126.36Citrate synthase (Fragment) OS=Rickettsia rhipicep... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-F04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728431 ID=EY728431; Name=EY728431; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGGCGGGATGAGAGGAATGACTGGCTTACTTTGGGAAACC
TCATTACTTGACCCTGATGAGGGAATTCGCTTTCGGGGTCTGTCTATTCC
TGAGTGCCAGAAGTTGTTACCTGCCGCTAAGCCAGATGGAGAACCTTTGC
CTGAGGGTCTTCTTTGGCTTCTTTTAACTGGAAAGGTACCGAGCAAAGAG
CAGGTCGATGGCTTGTCCAAGGAATTGAGAGATCGTGCCACTGTCCCAGA
TTATGTGTACAAGGCCATTGATGCTCTACCTGTAACGGCACATCCGATGA
CTCAGTTTGCTAGTGGGGTCATGGCTCTGCAGGTGCAAAGTGAATTTCAG
GAGGCTTATGAGAAGGGAATTCATAAATCAAAGTACTGGGAACCAACATA
TGAGGATTCTCTTAATTTGATTGCTCGTGTGCCGGTAGTAGCTGCGTACG
TTTATCAAAGGATATACAAGGATGGAAAGATTATTCCCAAGGATGACTCA
CTGGATTATGGTGGGAACTTCTCGCACATGTTGGGATTCGATGATCCTAA
GATGCTAGAGCTTATGAGGCTTTATGTTACCATTCACAGTGACCACGAAG
GTGGAAATGTCAGTGCTCACACCGGCCATCTAGTTGCAAGTGCACTTTCA
GATCCTTATCTTTCTTTTGCTGCCGCATTAAATGGTTTAGCTGGACCACT
CCATGGTTTGGCTAATCAGGAAGTTTTGCTTTGGATCAAATCTGTGGTGG
ATGAGTGTGGTGAGAACGTACAACGGAGCAGTTGAAAGATATGTCTGGAA
AACATTGAATATTTGCAGGGTGTCCCTGGATTTGGCCTGGTGTTTTGCGT
AAAATGATCCGAAATACCCTGTCAAAGGGAGTTGCCTT
back to top