EY728425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_METM7 (30S ribosomal protein S3P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps3p PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.922e-24 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEE 750 +R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++ELT + + N+ ++ ++V + L + L G+ R+ + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VKIM P LPD +TI S + +E Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIM---------KPDVSLPDEITILSGEIKE 201
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_METM6 (30S ribosomal protein S3P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps3p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.296e-23 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEE 750 +R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++ELT + + N+ ++ ++V + L + L G+ R+ + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VKIM P LPD +TI S + +E Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIM---------KPDVSLPDEITILSGEIKE 201
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_METMP (30S ribosomal protein S3P OS=Methanococcus maripaludis GN=rps3p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.692e-23 Identity = 64/210 (30.48%), Postives = 108/210 (51.43%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEE 750 +R FV + V ++E +L GYS ++ + TP+ T I + A + V+G KG+ ++ELT + + +E+ ++V N L + L G+ R+ + +R +M SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ G++G+ VKIM P LPD + I S + +E Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIM---------RPDVSLPDEIVISSGEIKE 201
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_HYPBU (30S ribosomal protein S3P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps3p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.887e-23 Identity = 64/214 (29.91%), Postives = 113/214 (52.80%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEEEYVK 762 KR F+ + +++E L + GY+GV++ P+ T +II A R ++G +G IR+L ++ + F ++ ++ +V N L A A + L G RR + R ++ +GA G ++++SGKLR +RA+ K + G + ++G V +D AV HV L+ GVLGI+V I+ P+ D V I P++ +E+++ Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIRQLAAIFEHEFGL--SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVLNAGAIGVQIVISGKLRTERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVMIVKPAKPS----------DYVRIKQPEEVKEFIE 206
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_SULSO (30S ribosomal protein S3P OS=Sulfolobus solfataricus GN=rps3p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.431e-23 Identity = 63/181 (34.81%), Postives = 98/181 (54.14%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 663 KR F+ + +++E L ++ Y+GVEV TP+ T +II A R ++G GR I++L + +K F + + V N L A A L L G RRA + +R IM +GA G E+I+SGKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V I Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGLENPQITI--TNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVI 183
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_SULAC (30S ribosomal protein S3P OS=Sulfolobus acidocaldarius GN=rps3p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.399e-23 Identity = 67/181 (37.02%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 663 KR F+ ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I++L V++K F + + A + N L A A L L G RRA + +R IM SGA G EVIVSGKL ++RAK K K+G + SGQ + + ID A+ +L+ GV G++V I Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIKQLAQVLEKFFGLENPQITVTAAE--NPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVI 183
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_METVS (30S ribosomal protein S3P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps3p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.433e-22 Identity = 63/210 (30.00%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEE 750 +R F+A+ V ++E +L GYS +E++ TP+ T I + A + V+G KG+ ++ELT + + +K +E+ + + L + L G+ R+ + +R +M +GAKG +I+SGKL +R+++ KF DGYM G+P E + + + L+ G++G+ VKIM P LPD + I S + +E Sbjct: 3 ERTFIAENVSETLIDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVKELTDTLTEVYKVENPQIEV--KPLETPDLDPAIVGHKIAASLEKGMHFRKTAHSAVRRVMAAGAKGVAIIISGKLSGERSRTEKFMDGYMKHCGEPAEELVIKSHQLAKLKLGIVGVTVKIM---------RPDVSLPDEIIILSGEIKE 201
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_AERPE (30S ribosomal protein S3P OS=Aeropyrum pernix GN=rps3p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.019e-21 Identity = 76/231 (32.90%), Postives = 113/231 (48.92%), Query Frame = 1 Query: 100 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEEEYVKPTLGATDMEV 792 M T++ K F+ G+ +++E L + E GYS V+V T + T I I A R ++G +G IR L V Q F P + + E+ N L A QA + + G+ RR + + IM +GA G E+ +SGKL ++RA+ KFK G + SG V+E +D A + L +GV+G+ V I+ P D V I S EE VK + A E+ Sbjct: 1 MPTKVVKH--FLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIGRRGATIRRLQEVFQTVFGLPNPRIRV--EQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNGALGVEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIVKPGKPG----------DHVRIKS----EEEVKDVVDAIRSEI 213
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_SULTO (30S ribosomal protein S3P OS=Sulfolobus tokodaii GN=rps3p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.341e-20 Identity = 60/181 (33.15%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 121 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 663 K+ F+ + ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I++L ++++ F ++ ++ V N L A A L L G RRA + +R IM +GA G EVI+SGKL ++RAK K K+G + SG +++ +D AV +L+ GV G+++ I Sbjct: 5 KKYFLQRSMTKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIKQLAQMLERYFGL--DNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMNAGALGAEVIISGKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEILI 183
BLAST of EY728425 vs. ExPASy Swiss-Prot
Match: RS3_STAMF (30S ribosomal protein S3P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps3p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.483e-19 Identity = 66/197 (33.50%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 160 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGXAGPTTPLPDLVTIHSPKDEE 750 L+E L + GY+G+E+ TP ++I A ++G G IR+L +++Q F +V + V + L A A + L + RR +LR +ME+GA G E+I+SGKLR++RA+ K K G + +G V+ +D AV LL++GV G++V I+ P PD V I S K EE Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHFGL--ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIV---------RPHLKPPDYVEIKSVKPEE 205 The following BLAST results are available for this feature:
BLAST of EY728425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728425 ID=EY728425; Name=EY728425; organism=Citrus sinensis; type=EST; length=892bpback to top |