EY728364

Overview
NameEY728364
Unique NameEY728364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 53/180 (29.44%), Postives = 79/180 (43.89%), Query Frame = 2
Query:  173 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYG--EGX*WLSQYIKXK 706
            +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LGL               ++R    ++ S     G G  EG  WLS  I  K
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF12_CAEEL (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans GN=arf-1.2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = 2
Query:  173 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGL 565
            ++E +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LGL
Sbjct:   15 KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGL 145          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   ++   SK EL  LL    L  +P L+LGNK DIP A  E EL   + L+
Sbjct:    8 LLDWFKALF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   SK EL  LL    L  +P L+LGNK D+P A  E EL   + L+
Sbjct:    8 LLDWFKALF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   SK EL  LL    L  +P L+LGNK D+P A  E EL   + L+
Sbjct:    8 LLDWFRALF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 53/183 (28.96%), Postives = 79/183 (43.17%), Query Frame = 2
Query:  173 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXE--RFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYG--EGX*WLSQYIKXKQ 709
            +KE +IL +GLD AGKTT+L+ L    +V   PT     E +    I F  +D+GG    R +W                   E  R  ++K EL  LL ++ L +   L+  NK D+P A S  +L   LGL                ++  + ++     + G G  +G  WLS YI  K+
Sbjct:   15 KKEVRILMVGLDAAGKTTILYKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGL--------------QELKKRDWYIQPTCARSGDGLYQGLDWLSDYIFDKK 183          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 2
Query:  140 FYGILASL-GLWQKEAKILFLGLDNAGKTTLLHMLK--DERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLAN--VPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVN 598
            F+  L+SL GL +K+  I+ +GLDN+GKTT+L+ LK  + R  Q  PT        S   + F AFD+ G    R  W                    R    K EL  ++  + + +  +P +IL NK+DIP A +  ++   LGL  + +G   ++
Sbjct:    3 FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIH 160          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 40/132 (30.30%), Postives = 61/132 (46.21%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTN 571
            +E K++ +GLDNAGKTT+L+      +V   PT     EE+ I   +F  +D+GG +  R  W                   ER + ++ EL  +L+ E L     LI  NK D+    +  E+   L LT+
Sbjct:   15 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTS 146          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.339e-11
Identity = 45/139 (32.37%), Postives = 63/139 (45.32%), Query Frame = 2
Query:  149 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGL 565
            IL  +   ++E ++L LGLDNAGKTT+L     E +    PT     + L     K   +D+GG +  R  W                   +R  + +REL  LL +E LA    LI  NK D+P A S + +R  L L
Sbjct:    6 ILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALEL 144          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.054e-11
Identity = 39/132 (29.55%), Postives = 61/132 (46.21%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTN 571
            +E K++ +GLDNAGKTT+L+      +V   PT     EE+ +   +F  +D+GG +  R  W                   ER + ++ EL  +L+ E L     LI  NK D+    +  E+   L LT+
Sbjct:   15 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTS 146          
The following BLAST results are available for this feature:
BLAST of EY728364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ARF1_DAUCA1.371e-1129.44ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF12_CAEEL1.371e-1132.06ADP-ribosylation factor 1-like 2 OS=Caenorhabditis... [more]
ARL8A_XENTR1.791e-1128.38ADP-ribosylation factor-like protein 8A OS=Xenopus... [more]
ARL8A_HUMAN1.791e-1128.38ADP-ribosylation factor-like protein 8A OS=Homo sa... [more]
ARL8A_CHICK1.791e-1128.38ADP-ribosylation factor-like protein 8A OS=Gallus ... [more]
ARF_GIALA1.791e-1128.96ADP-ribosylation factor OS=Giardia lamblia PE=3 SV... [more]
ARL6_CAEEL2.339e-1130.38ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL5A_HUMAN2.339e-1130.30ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL2_BOVIN2.339e-1132.37ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL5A_RAT3.054e-1129.55ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728364 ID=EY728364; Name=EY728364; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGAT
TCATCATATTTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAAT
AAGGAGTAATAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGAT
TCTTGCATCTCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCG
GCCTCGATAATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAG
AGATTAGTTCAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAG
TATTGGGAAAATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTG
CTCGTAGAGTTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTAC
CTGGTAGATGCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCT
TGATGCCCTGCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTT
TGGGCAACAAAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGA
TATCACCTTGGACTGACCAACTTCACCACTGGCAAGGGTAAGGTGAATCT
GGTTGATTCAAACGTTCGTCCCCTTGAGGTATTCATGTGCAGCATTGTCC
GCAAAATGGGTTACGGAGAGGGATNNTAGTGGCTGTCTCAGTACATCAAG
TANAAGCAGAAGTAGAATTTGTTCGGTTCTTTCTTTATATGTTGTTACAC
AATGAATTGAGGTGGATGCGTTTCCTTTAAAACTGGAGATCTTGTATTCT
CCCATTTCGCCTATGAATGACAACATTGCACGTCATCCTGTTACAGACTT
TA
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