EY728364

Overview
NameEY728364
Unique NameEY728364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 50/195 (25.64%), Postives = 81/195 (41.54%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQ 709
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   S+ EL  LL    L  +P L+LGNK D+P A  E +L              K+NL     R +  +  S   K        WL QY K ++
Sbjct:    8 LLDWFRSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQL------------IEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQYSKSRR 185          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 46/148 (31.08%), Postives = 69/148 (46.62%), Query Frame = 2
Query:  143 YGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGK 586
            +G L S    +K+ +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E+  EL  +L+++ L +   L+  NK D+P A S  E+   L L +  + K
Sbjct:    5 FGKLFSRFFGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEFKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSVAEVTDKLNLHSLRSRK 152          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 40/148 (27.03%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   S+ EL  LL    L  +P L+LGNK D+P A  E +L   + L+
Sbjct:    8 LLDWFRSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 40/148 (27.03%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   S+ EL  LL    L  +P L+LGNK D+P A  E +L   + L+
Sbjct:    8 LLDWFRSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 40/148 (27.03%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   S+ EL  LL    L  +P L+LGNK D+P A  E +L   + L+
Sbjct:    8 LLDWFRSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 40/148 (27.03%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            L DWF  +      W++E ++  +GL  +GKTT ++++   +  +   PT      +++ G +  K +D+GG    R +W                   E+   S+ EL  LL    L  +P L+LGNK D+P A  E +L   + L+
Sbjct:    8 LLDWFRSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLS 150          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 46/174 (26.44%), Postives = 72/174 (41.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            +E K++ +GLDNAGKTT+L+      +V   PT     EE+ +    F  +D+GG +  R  W                   ER A +K EL  +L+ E L     LI  NK D+    +  E+  +L L++                P  +  C  +   G  +G  W++  I
Sbjct:   15 QEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKD------------HPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 46/174 (26.44%), Postives = 72/174 (41.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            +E K++ +GLDNAGKTT+L+      +V   PT     EE+ +    F  +D+GG +  R  W                   ER A +K EL  +L+ E L     LI  NK D+    +  E+  +L L++                P  +  C  +   G  +G  W++  I
Sbjct:   15 QEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKD------------HPWHIQSCCALTGEGLCQGLEWMTSRI 176          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL2_CAEEL (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans GN=evl-20 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 45/152 (29.61%), Postives = 65/152 (42.76%), Query Frame = 2
Query:  140 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKV 595
            F  IL      ++E +IL LGLDNAGKTTL+    DE     +PT     + +     +   +D+GG +  R  W                   ER  +   EL  LL +E LA    L+L NK D+P A   + +   L L +  +   K+
Sbjct:    3 FLKILRKQRAREREMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKI 154          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 42/131 (32.06%), Postives = 61/131 (46.56%), Query Frame = 2
Query:  173 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGL 565
            +K+ +IL +GLD AGKTT+L+ LK   +V   PT     E +    I F  +D+GG    R +W                   ER  E   EL  +L ++ L +   L+  NK D+P A +  E+   LGL
Sbjct:   15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGL 145          
The following BLAST results are available for this feature:
BLAST of EY728364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ARL8B_MACFA5.210e-1125.64ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARF1_DICDI5.210e-1131.08ADP-ribosylation factor 1 OS=Dictyostelium discoid... [more]
ARL8B_RAT6.805e-1127.03ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_PONAB6.805e-1127.03ADP-ribosylation factor-like protein 8B OS=Pongo a... [more]
ARL8B_MOUSE6.805e-1127.03ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN6.805e-1127.03ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL5B_MOUSE6.805e-1126.44ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN6.805e-1126.44ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL2_CAEEL6.805e-1129.61ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARF4_BOVIN6.805e-1132.06ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728364 ID=EY728364; Name=EY728364; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGAT
TCATCATATTTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAAT
AAGGAGTAATAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGAT
TCTTGCATCTCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCG
GCCTCGATAATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAG
AGATTAGTTCAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAG
TATTGGGAAAATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTG
CTCGTAGAGTTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTAC
CTGGTAGATGCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCT
TGATGCCCTGCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTT
TGGGCAACAAAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGA
TATCACCTTGGACTGACCAACTTCACCACTGGCAAGGGTAAGGTGAATCT
GGTTGATTCAAACGTTCGTCCCCTTGAGGTATTCATGTGCAGCATTGTCC
GCAAAATGGGTTACGGAGAGGGATNNTAGTGGCTGTCTCAGTACATCAAG
TANAAGCAGAAGTAGAATTTGTTCGGTTCTTTCTTTATATGTTGTTACAC
AATGAATTGAGGTGGATGCGTTTCCTTTAAAACTGGAGATCTTGTATTCT
CCCATTTCGCCTATGAATGACAACATTGCACGTCATCCTGTTACAGACTT
TA
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