EY728364

Overview
NameEY728364
Unique NameEY728364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.682e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 2
Query:  125 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG V+L + N RPLEVFMCS++++ GYGEG  W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.809e-57
Identity = 114/192 (59.38%), Postives = 135/192 (70.31%), Query Frame = 2
Query:  122 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            M+L+ WFY IL++LGL  K  K+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEELS+G +KF  FDLGGHQ ARR+W                   ER  E+K E+DALLS E LA VPF++LGNKID P A SEDELR  LGL   TTGKG+V L    +RP+EVFMCS+V + GYGE   WLSQY+
Sbjct:    1 MWLWSWFYDILSNLGLLNKHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQ-TTGKGRVPL--EGIRPIEVFMCSVVMRQGYGEAIRWLSQYV 189          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.809e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 2
Query:  125 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG V+L + N RPLEVFMCS++++ GYGEG  W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.281e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 2
Query:  125 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG V+L + N RPLEVFMCS++++ GYGEG  W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.281e-57
Identity = 111/195 (56.92%), Postives = 135/195 (69.23%), Query Frame = 2
Query:  125 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG ++L + N RPLEVFMCS++++ GYGEG  W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.281e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 2
Query:  125 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG V+L + N RPLEVFMCS++++ GYGEG  W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.281e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 2
Query:  125 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I  + F  FDLGGH  ARRVW                   ER  ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR   GL   TTGKG V+L + N RPLEVFMCS++++ GYGEG  W++QYI
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.203e-57
Identity = 117/192 (60.94%), Postives = 134/192 (69.79%), Query Frame = 2
Query:  122 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            M++ +WF  +LASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEELSIG ++F  FDLGGH+ ARRVW                   ERF ES+ ELDALL  E L+ VP L+LGNKID   A SE+ELR+ LGL   TTGK KV LV+   RPLEVF CSI  + GYGEG  WLSQYI
Sbjct:    1 MWVLNWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMT-TTGKDKVQLVEGQ-RPLEVFTCSIYLRQGYGEGIRWLSQYI 190          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.399e-56
Identity = 114/192 (59.38%), Postives = 139/192 (72.40%), Query Frame = 2
Query:  122 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            MFLFDWF+ +L+ LGL+ K AKILFLGLDNAGKTTLL +LKD RL  + PT HPTSEEL++G I+FKAFDLGGH+ ARR+W                   +RF ESK+ELD+LLS + LANVPFLILGNK+DI    SE++ R  LGLT  TTGKGK  L  + VRP+EVFMCS+V++ GY EG  WL+ Y+
Sbjct:    1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIG-NTSEEKFRASLGLTQ-TTGKGKTTL--NGVRPIEVFMCSVVKRYGYAEGFRWLANYL 188          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.827e-56
Identity = 116/192 (60.42%), Postives = 135/192 (70.31%), Query Frame = 2
Query:  122 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYI 697
            MF+ +WFY  LA LGL  K AK+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEEL+IG ++F  FDLGGHQ ARR+W                   ER +ESK ELDALL+ E LA VPFLILGNKID P A SEDEL+  LGL   TTGKG V+     +RP+EVFMCS+V + GYGEG  WL+QY+
Sbjct:    1 MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCSVVLRQGYGEGFKWLAQYV 190          
The following BLAST results are available for this feature:
BLAST of EY728364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
SAR1B_MOUSE3.682e-5757.44GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
SAR1_NEUCR4.809e-5759.38Small COPII coat GTPase sar-1 OS=Neurospora crassa... [more]
SAR1B_RAT4.809e-5757.44GTP-binding protein SAR1b OS=Rattus norvegicus GN=... [more]
SAR1B_PIG6.281e-5757.44GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B P... [more]
SAR1B_HUMAN6.281e-5756.92GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B... [more]
SAR1B_CRIGR6.281e-5757.44GTP-binding protein SAR1b OS=Cricetulus griseus GN... [more]
SAR1B_BOVIN6.281e-5757.44GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B P... [more]
SAR1_PICPG8.203e-5760.94Small COPII coat GTPase SAR1 OS=Pichia pastoris (s... [more]
SAR1A_DICDI1.399e-5659.38GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
SAR1_SCHPO1.827e-5660.42Small COPII coat GTPase sar1 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728364 ID=EY728364; Name=EY728364; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGAT
TCATCATATTTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAAT
AAGGAGTAATAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGAT
TCTTGCATCTCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCG
GCCTCGATAATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAG
AGATTAGTTCAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAG
TATTGGGAAAATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTG
CTCGTAGAGTTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTAC
CTGGTAGATGCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCT
TGATGCCCTGCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTT
TGGGCAACAAAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGA
TATCACCTTGGACTGACCAACTTCACCACTGGCAAGGGTAAGGTGAATCT
GGTTGATTCAAACGTTCGTCCCCTTGAGGTATTCATGTGCAGCATTGTCC
GCAAAATGGGTTACGGAGAGGGATNNTAGTGGCTGTCTCAGTACATCAAG
TANAAGCAGAAGTAGAATTTGTTCGGTTCTTTCTTTATATGTTGTTACAC
AATGAATTGAGGTGGATGCGTTTCCTTTAAAACTGGAGATCTTGTATTCT
CCCATTTCGCCTATGAATGACAACATTGCACGTCATCCTGTTACAGACTT
TA
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