EY728364

Overview
NameEY728364
Unique NameEY728364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14
Identity = 55/179 (30.73%), Postives = 79/179 (44.13%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQK 712
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP L+  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +  K+K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGL------------NLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKK 182          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14
Identity = 56/179 (31.28%), Postives = 79/179 (44.13%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQK 712
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +G  W+ + +  K+K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRFWQIQSCSALTGEGVQDGMNWVCKNVSAKKK 182          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 78.5666 bits (192), Expect = 5.035e-14
Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQ 709
            +  +F G+L S     +E +IL LGLD AGKTT+L+ L+   +V   PT     E+++   +KF+ +DLGG    R  W                   +R   SK EL  +L +E LA    ++L NK D+    +  E+ + LGL N               R  ++F  S  +  G  +   WLS  ++ ++
Sbjct:    4 VLSYFRGLLGS-----REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKN------------RTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.576e-14
Identity = 55/175 (31.43%), Postives = 75/175 (42.86%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIK 700
            KEA+IL LGLDNAGKTT+L+ L+   +V   PT     E +    IKF+ +DLGG    R  W                   +R   +K E  A+L ++ L     LI  NK D+P A  +  +   L L    +            R   +F    V+  G  EG  WLS  +K
Sbjct:   16 KEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKS------------RQWAIFKTCAVKGEGLFEGLDWLSNTLK 178          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13
Identity = 56/191 (29.32%), Postives = 83/191 (43.46%), Query Frame = 2
Query:  137 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQ 709
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT     E ++   +KF+ +DLGG    R  W                   +R   SK EL A+L +E L     ++  NK D+  A +  E+   LGL                 R  ++F  S  +  G  E   WL + +K +Q
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKD------------RKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 181          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13
Identity = 56/191 (29.32%), Postives = 83/191 (43.46%), Query Frame = 2
Query:  137 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQ 709
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT     E ++   +KF+ +DLGG    R  W                   +R   SK EL A+L +E L     ++  NK D+  A +  E+   LGL                 R  ++F  S  +  G  E   WL + +K +Q
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKD------------RKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 181          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13
Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = 2
Query:  179 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNF 574
            EA+++ +GLD+AGKTT+L+ LK  +LV   PT     E L   G +    +D+GG    R  W                    R  E+  EL  +L D ++A VPFL+L NK + P A    E+R  LGL  F
Sbjct:   12 EAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGF 144          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 56/191 (29.32%), Postives = 83/191 (43.46%), Query Frame = 2
Query:  137 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQ 709
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT     E ++   +KF+ +DLGG    R  W                   +R   SK EL A+L +E L     ++  NK D+  A +  E+   LGL                 R  ++F  S  +  G  E   WL + +K +Q
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKD------------RKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 181          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 56/191 (29.32%), Postives = 83/191 (43.46%), Query Frame = 2
Query:  137 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXKQ 709
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT     E ++   +KF+ +DLGG    R  W                   +R   SK EL A+L +E L     ++  NK D+  A +  E+   LGL                 R  ++F  S  +  G  E   WL + +K +Q
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKD------------RKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 181          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF_AJECA (ADP-ribosylation factor OS=Ajellomyces capsulata GN=ARF PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFT 577
            LFD  +G        +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I+F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A S  E+   LGL + T
Sbjct:    8 LFDRIWG--------KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLT 149          
The following BLAST results are available for this feature:
BLAST of EY728364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ARL3_RAT3.855e-1430.73ADP-ribosylation factor-like protein 3 OS=Rattus n... [more]
ARL3_BOVIN3.855e-1431.28ADP-ribosylation factor-like protein 3 OS=Bos taur... [more]
ARL1_DROME5.035e-1428.35ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARF3_ARATH6.576e-1431.43ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]
ARL1_HUMAN1.122e-1329.32ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARL1_BOVIN1.465e-1329.32ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL11_MOUSE1.465e-1335.34ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
ARL1_RAT1.913e-1329.32ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE1.913e-1329.32ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]
ARF_AJECA1.913e-1332.00ADP-ribosylation factor OS=Ajellomyces capsulata G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728364 ID=EY728364; Name=EY728364; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGAT
TCATCATATTTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAAT
AAGGAGTAATAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGAT
TCTTGCATCTCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCG
GCCTCGATAATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAG
AGATTAGTTCAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAG
TATTGGGAAAATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTG
CTCGTAGAGTTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTAC
CTGGTAGATGCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCT
TGATGCCCTGCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTT
TGGGCAACAAAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGA
TATCACCTTGGACTGACCAACTTCACCACTGGCAAGGGTAAGGTGAATCT
GGTTGATTCAAACGTTCGTCCCCTTGAGGTATTCATGTGCAGCATTGTCC
GCAAAATGGGTTACGGAGAGGGATNNTAGTGGCTGTCTCAGTACATCAAG
TANAAGCAGAAGTAGAATTTGTTCGGTTCTTTCTTTATATGTTGTTACAC
AATGAATTGAGGTGGATGCGTTTCCTTTAAAACTGGAGATCTTGTATTCT
CCCATTTCGCCTATGAATGACAACATTGCACGTCATCCTGTTACAGACTT
TA
back to top