EY728364

Overview
NameEY728364
Unique NameEY728364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.499e-13
Identity = 57/189 (30.16%), Postives = 83/189 (43.92%), Query Frame = 2
Query:  140 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYG--EGX*WLSQYIK 700
            F+  ++S      E + L LGLD AGKTT+L+ LK    V   PT     E ++  KI    +D+GG +  R +W                   ER  E+K EL +LL++  LA+   L+  NK D+P A S  EL   L L               +++  E F+C      G G  EG  W+ + +K
Sbjct:    4 FFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDL--------------GSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  179 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNF 574
            EA+++ +GLD+AGKTTLL+ LK  +LV+  PT     E L   G +    +D+GG    R  W                    R  ES  EL  +L+D ++A VPFL+L NK + P A    ++R  L L  F
Sbjct:   12 EAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERF 144          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 47/141 (33.33%), Postives = 68/141 (48.23%), Query Frame = 2
Query:  146 GILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 568
            G L S     KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E++ EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:    2 GKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 58/177 (32.77%), Postives = 84/177 (47.46%), Query Frame = 2
Query:  176 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEGX*WLSQYIKXK 706
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   IKF  +D+GG    R +W                    R +E+++EL  ++SD  + +   L+L NK D+P A S  ++   L L      K ++     NV+P     C++    G  EG  WLSQ  K K
Sbjct:   20 KEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKL---KDRL----WNVQP----TCALTGD-GLLEGLAWLSQNAKLK 184          
BLAST of EY728364 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 5.567e-13
Identity = 57/195 (29.23%), Postives = 87/195 (44.62%), Query Frame = 2
Query:  128 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYG--EGX*WLSQYIKXK 706
            LFD  +G        +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I+F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A +  E+   LGL              S++R    ++ +     G G  EG  WLS  +K K
Sbjct:   11 LFDGLFG--------KKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGL--------------SSLRQRSWYIQATCATTGDGLFEGLDWLSTELKKK 183          
The following BLAST results are available for this feature:
BLAST of EY728364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
ARF11_CAEEL2.499e-1330.16ADP-ribosylation factor 1-like 1 OS=Caenorhabditis... [more]
ARL11_HUMAN4.262e-1335.34ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARF6_RAT4.262e-1333.59ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]
ARF6_PIG4.262e-1333.59ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE... [more]
ARF6_MOUSE4.262e-1333.59ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 ... [more]
ARF6_HUMAN4.262e-1333.59ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 ... [more]
ARF6_CHICK4.262e-1333.59ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6... [more]
ARF3_DROME4.262e-1333.33ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARF2_SCHPO4.262e-1332.77Probable ADP-ribosylation factor OS=Schizosaccharo... [more]
ARF_NEUCR5.567e-1329.23ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-G06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728364 ID=EY728364; Name=EY728364; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGATCACGCACTCGTTGATTCCTCCTAATTATCTCAAAGAT
TCATCATATTTGAGCCAAAATTCGATCTTTTTGATAGATTCATTATAAAT
AAGGAGTAATAAAAGAAACCCATGTTTTTGTTTGATTGGTTTTATGGGAT
TCTTGCATCTCTTGGGCTCTGGCAAAAAGAGGCCAAGATCTTGTTTCTCG
GCCTCGATAATGCCGGTAAAACGACGCTGCTTCATATGTTGAAAGATGAG
AGATTAGTTCAACATCAACCAACACAACATCCCACTTCGGAGGAACTGAG
TATTGGGAAAATCAAGTTTAAGGCTTTTGATTTGGGAGGGCATCAGATTG
CTCGTAGAGTTTGGAAAGATTACTACGCCAAGGTTGATGCGGTTGTGTAC
CTGGTAGATGCGTATGACAAGGAGAGGTTTGCTGAGTCAAAAAGGGAGCT
TGATGCCCTGCTTTCAGATGAATCCTTGGCCAATGTTCCATTCCTAATTT
TGGGCAACAAAATTGATATCCCATATGCTGCATCAGAAGATGAGTTGCGA
TATCACCTTGGACTGACCAACTTCACCACTGGCAAGGGTAAGGTGAATCT
GGTTGATTCAAACGTTCGTCCCCTTGAGGTATTCATGTGCAGCATTGTCC
GCAAAATGGGTTACGGAGAGGGATNNTAGTGGCTGTCTCAGTACATCAAG
TANAAGCAGAAGTAGAATTTGTTCGGTTCTTTCTTTATATGTTGTTACAC
AATGAATTGAGGTGGATGCGTTTCCTTTAAAACTGGAGATCTTGTATTCT
CCCATTTCGCCTATGAATGACAACATTGCACGTCATCCTGTTACAGACTT
TA
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