EY728360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_YERPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 117/242 (48.35%), Postives = 159/242 (65.70%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVERPTTVSS--GVVWAGGDWPSPVILWRSPRQRTGGVGV 725 PFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ +P G RKHP+ + + +DT ILFICGGAF GL+K I +R S IGFGA V+ G ++ LL V DL+ +GLIPE GR P++ +LS L+ED L+Q+L+EP NAL ++ + S GV D I ++ ++TG G+ Sbjct: 139 PFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTI--AAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK------GQSEKATEGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGL 372
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_VARPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Variovorax paradoxus (strain S110) GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 110/207 (53.14%), Postives = 147/207 (71.01%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVERPT 629 PF + DAT LT+AGYVGED E+++ KLL + +++VE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGT+ +V P G RKHP D + IDT +ILFICGGAF GLEK I R + S IGFGA V++ + + + V DL+ +GLIPE+ GR P++ SL+ L+ED LVQ+L EP NA+V++ T Sbjct: 142 PFVMADATTLTEAGYVGEDVENIIQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASV--PPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKAQRS-------ITEVFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFT 339
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_RHILO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium loti GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 113/207 (54.59%), Postives = 150/207 (72.46%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRA--NMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL +AD++VE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GL+K IS+R + +SIGFGA V + + RTG + V DL+ +GLIPE GR P+L +L L+E L+Q+L EP NALV++ Sbjct: 140 PFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVASPEDRRTG---------DIFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQ 335
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_NEIMB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup B GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 111/205 (54.15%), Postives = 141/205 (68.78%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PF + DAT LT+AGYVGED E ++ KLL DFDVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +T L V DL+ +GLIPE+ GR P++ +L L+ED L+ +L EP NALV++ Sbjct: 139 PFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASV--PPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQ 335
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_NEIMA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup A GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 111/205 (54.15%), Postives = 141/205 (68.78%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PF + DAT LT+AGYVGED E ++ KLL DFDVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +T L V DL+ +GLIPE+ GR P++ +L L+ED L+ +L EP NALV++ Sbjct: 139 PFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASV--PPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQ 335
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_MAGSA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 113/205 (55.12%), Postives = 146/205 (71.22%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL AA+++VE AQRGIVYIDEVDKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT +ILFICGGAF GLEK I R + +SIGFGA VR D T +L V DL+ +GLIPE GR P+L +L L+ D L+ +L +P NALV++ Sbjct: 138 PFTMADATTLTEAGYVGEDVENIILKLLQAAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASV--PPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG-------PDERRTGEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQ 333
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_COLP3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=clpX PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 114/210 (54.29%), Postives = 146/210 (69.52%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQ-DSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVERPTTV 635 PFT+ DAT LT+AGYVGED E+++ KLL D+DVE AQRGIVYIDE+DKI K+++ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT ILFICGGAF GL+K + +R + IGFGA VR + LTD L V DLV YGLIPE GR P+L +L L+E L+Q+L+EP NAL ++ T + Sbjct: 140 PFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASV--PPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVEQRNHTGTGIGFGAEVRGKDQEISLTDRLA------DVEPQDLVKYGLIPEFIGRLPVLATLRELDEAALIQILQEPKNALTKQFTAL 341
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_PROMH (ATP-dependent Clp protease ATP-binding subunit clpX OS=Proteus mirabilis (strain HI4320) GN=clpX PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 110/206 (53.40%), Postives = 145/206 (70.39%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISER-RQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PFT+ DAT LT+AGYVGED E+++ KLL D+DV+ AQRGIVYIDE+DKI K+E+ + RDVSGEGVQQALLK++EGTV +V P G RKHP+ + + +DT ILFICGGAF GL+K +++R S IGFGA V++ + LL V DL+ +GLIPE GR P++ +L LNED L+Q+L+EP NAL ++ Sbjct: 139 PFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASV--PPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ------NEKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQ 336
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_NEIMF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=clpX PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 111/205 (54.15%), Postives = 140/205 (68.29%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PF + DAT LT+AGYVGED E ++ KLL DFDVE AQRGIVYIDE+DKI K ++ + RDVSGEGVQQALLK++EGTV +V P G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +T L V DL+ +GLIPE+ GR P++ +L L+ED L+ +L EP NALV++ Sbjct: 139 PFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGTVASV--PPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQ 335
BLAST of EY728360 vs. ExPASy Swiss-Prot
Match: CLPX_NEIM0 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup C (strain 053442) GN=clpX PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53 Identity = 111/205 (54.15%), Postives = 140/205 (68.29%), Query Frame = 3 Query: 12 PFTITDATALTQAGYVGEDAESLLYKLLAAADFDVEAAQRGIVYIDEVDKIV-KAESRNNGRDVSGEGVQQALLKMLEGTVVNVPIPDNGPRKHPRGDNIPIDTKDILFICGGAFVGLEKTISERRQDSSIGFGAPVRANMRTGGLTDALVTSSLLESVHSGDLVAYGLIPEVRGRWPILVSLSALNEDQLVQVLREPGNALVER 623 PF + DAT LT+AGYVGED E ++ KLL DFDVE AQRGIVYIDE+DKI K ++ + RDVSGEGVQQALLK++EGTV +V P G RKHP + I +DT +ILFICGGAF GLEK I +R + IGFGA V + +T L V DL+ +GLIPE+ GR P++ +L L+ED L+ +L EP NALV++ Sbjct: 139 PFVMADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGTVASV--PPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENADIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQ 335 The following BLAST results are available for this feature:
BLAST of EY728360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728360 ID=EY728360; Name=EY728360; organism=Citrus sinensis; type=EST; length=894bpback to top |