EY728356

Overview
NameEY728356
Unique NameEY728356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3283 contig Csv1_Contig3283:331..1238. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.432e-17
Identity = 52/167 (31.14%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   78 YTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRI-GKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERM 575
            Y +II KL  +K FD ++ ++  +K +     ++  F NVI  +G   G++  +A+    +MP Y C  +VK+ N +L+ L+      +++   +S  + G + DAC  NIL+ G  ++G  + A  + DE  K+  +P   TF TL+HGLC+   V+EA  +   M
Sbjct:   50 YDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGR--GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 53/200 (26.50%), Postives = 95/200 (47.50%), Query Frame = 3
Query:  159 KLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRFL 758
            +LC  + + +  +I++Y    G I  ++E    M  Y   PSV T N +L  +V +     +        K  +  D    NIL+  LC  G+ E + Y++ +  K    P + T++T++H  C+KG  + A  LL+ M+S+G+DAD  T+N+LI  L +                   +PN  +Y+ ++ G  ++ + L
Sbjct:  117 RLCNSNPSVYDILIRVYLR-EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315          

HSP 2 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 53/233 (22.75%), Postives = 95/233 (40.77%), Query Frame = 3
Query:   57 YNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRF 755
            +NP+      I+  + ++    ++   ++ +   K+C   D   +N++       G   K+   +  M      P++ T+N VL+       +     +       GV+ D C  N+L+  LC +  +   + +L +  K+   PN  T++TL++G   +G V  A  LL  M S G+  + VTFN LI G   +                   P+  SY  +L GL     F
Sbjct:  154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKIC--PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384          

HSP 3 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 56/225 (24.89%), Postives = 98/225 (43.56%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            PN+ +YT  ++ + +A  + A   I  R +++ L    D    N +    +  G+I K  + L +M + N  P++ T+N++L+     K       +Y S    G+  D    + L+ G+CE+  LE    +L  F  +  E +  TF+ L+   C  G +  AF L++ M S GI  D  T + ++S L +                    P S  Y  ++ GL
Sbjct:  682 PNKVMYTCFVDGMFKAGQWKA--GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 59/278 (21.22%), Postives = 114/278 (41.01%), Query Frame = 3
Query:   27 VLNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNV-----------------------------------RTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRF 755
            + N   K   +    + Y  +I KL     F+A+E+++  ++        +  +   +K YG   G++ +A+     M  Y+C P+V ++N ++++LV +  + +   +Y      G+  D     I +K  C+     AA  +L+    Q CE NV                                    TF+ L+  LC+KG+V+E   LL+++   G+  +  T+N+ I GL ++                   P+  +Y+ ++YGL    +F
Sbjct:   26 MFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRK-GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302          

HSP 2 Score: 75.0998 bits (183), Expect = 6.200e-13
Identity = 48/188 (25.53%), Postives = 93/188 (49.47%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERM-ESEGIDADTVTFNILI 623
            P    + +++N L +       + ++ ++ + K   F D F +N++    +   ++  A+E L  M      P V T+N +LN L     + ++   Y +  + G   +    NILL+ LC    L+ A  +L+E   ++  P+  TF TL+ G C+ G+++ A+ L  +M E+  + + T T+NI+I
Sbjct:  424 PEVQTFNILVNGLCKMGCVSDADGLV-KVMISK-GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609          

HSP 3 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 60/232 (25.86%), Postives = 103/232 (44.40%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCW-PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRF 755
            P+   Y  +I  L +   F   E  + ++  E L    D++ YN + I G   G + +  E +     +N + P   T+  +++ L           ++  A   G++ +    N L+KGL   G +  A  + +E  ++   P V+TF+ L++GLC+ G V +A GL++ M S+G   D  TFNILI G   Q                   P+  +Y+ +L GL    +F
Sbjct:  284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL--EPDSYTYNTL-IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512          

HSP 4 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 51/196 (26.02%), Postives = 83/196 (42.35%), Query Frame = 3
Query:   51 KDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 638
            K   PN  LY  +I  L+          +   +  + L    +   +N++       G +  A   +  M S   +P + TFN++++   +         I       GV+ D    N LL GLC+    E          ++ C PN+ TF+ L+  LC    ++EA GLLE M+++ ++ D VTF  LI G  K
Sbjct:  385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL--IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578          

HSP 5 Score: 70.0922 bits (170), Expect = 1.994e-11
Identity = 41/151 (27.15%), Postives = 74/151 (49.01%), Query Frame = 3
Query:  285 VKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            + TFN +L +L       E + +     K GV  +    N+ ++GLC+ G L+ A  ++    +Q  +P+V T++ L++GLC+    +EA   L +M +EG++ D+ T+N LI+G  K                    P+  +Y  ++ GL
Sbjct:  216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR9_ARATH (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 59/232 (25.43%), Postives = 106/232 (45.69%), Query Frame = 3
Query:   45 KRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYN-VIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            K     P    Y  ++N L  A   D+ E + + ++  ++    D   YN +IK Y   AG+  KA+E L DM +        T+  ++    +   +G    +Y    + G+++     ++++ GLC+ G L   + V +   ++  +PNV  ++ L+ G  + G+VE+A  LL RM  EG   D VT++++++GL K                     NS  YS ++ GL
Sbjct:  214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK--PDIVTYNTMIKGYCK-AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 56/222 (25.23%), Postives = 98/222 (44.14%), Query Frame = 3
Query:   78 YTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLD 743
            Y++II+ L +  S D   ++   ++++     +D   Y  +      AGR     + L DM      P V  F+ +++  V      E + ++    + G+  D      L+ G C+   L+ A ++LD    + C PN+RTF+ L++G C+   +++   L  +M   G+ ADTVT+N LI G  +                    P+  SY  +L GL D
Sbjct:  250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFK--ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469          

HSP 2 Score: 81.2629 bits (199), Expect = 8.651e-15
Identity = 41/136 (30.15%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  225 RIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 632
            ++ KA   L  M S  C P+++TFN+++N    A L  +   ++   +  GV  D    N L++G CE G LE A  +  E   +   P++ ++  L+ GLC+ G  E+A  + E++E   ++ D   +NI+I G+
Sbjct:  367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502          

HSP 3 Score: 75.0998 bits (183), Expect = 6.200e-13
Identity = 47/191 (24.61%), Postives = 95/191 (49.74%), Query Frame = 3
Query:   51 KDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 623
            K   PN   + ++IN   +A   D   ++ +++ +  +   +D   YN +       G++  A E   +M S    P + ++ ++L+ L       +   I+    K  +E+D    NI++ G+C    ++ A+ +    P +  +P+V+T++ ++ GLC+KG++ EA  L  +ME +G   +  T+NILI
Sbjct:  381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV--ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.207e-16
Identity = 66/241 (27.39%), Postives = 111/241 (46.06%), Query Frame = 3
Query:   48 RKDYNPNEALYTLIIN------KLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKR 752
            R +   N   + ++IN      KL +AK F  I ++   IK   +        YN +    ++ GRI  A   + +M S    P ++T+N +L+ + +    G    +     ++G+  D+   NIL++G   NG+LE AF   DE  KQ   P   T++TL+HGL  +  +E A  L+  +  +GI  D+VT+NILI+G  +                    P   +Y+ ++Y L  K +
Sbjct:  218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG-IKPTIVT-------YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447          

HSP 2 Score: 80.1073 bits (196), Expect = 1.927e-14
Identity = 57/225 (25.33%), Postives = 99/225 (44.00%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            P    Y  +I+ L      +A E +++ I+ + +    D+  YN++       G   KA     +M +    P+  T+  ++ +L       E   ++      G++ D   +N L+ G C  GN++ AF +L E    +  P+  T++ LM GLC +G  EEA  L+  M+  GI  D +++N LISG  K+                   P   +Y+ +L GL
Sbjct:  360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL--DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.577e-16
Identity = 53/233 (22.75%), Postives = 113/233 (48.50%), Query Frame = 3
Query:   54 DYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL-GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKK 749
            DY+ +  ++++ +  LA+ K F A+  ++      +    S++F    I +YG  A  + ++I+T  ++  Y    +VK+ N +L   + AK Y E   +Y    K+ G+E D    N +++ LCE+G+  +++ ++ E  ++  +P   +F  ++ G  ++   +E   ++  M+  G+     T+NI+I  L K+                   PNS +YS +++G   ++
Sbjct:   70 DYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGR-ANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 55/208 (26.44%), Postives = 100/208 (48.08%), Query Frame = 3
Query:    3 TRPRTRGSVLNQYSKRKD-YNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 623
            +R R      + +   KD + P+  +YT ++    +A      E + + +K+  +    + + Y+++       G+I +A +   DM    C P+  TFN ++ + V A    ++  +Y    KLG E D    N L++  C + NLE A  VL+   K+ CE N  TF+T+   + +K +V  A  +  +M     + +TVT+NIL+
Sbjct:  232 SRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGI--EPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437          

HSP 2 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 49/235 (20.85%), Postives = 100/235 (42.55%), Query Frame = 3
Query:   39 YSKRKDYN--PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNM------AGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYS 719
            +++ +DY   P++  ++++I+ L++ +     +     +K        D F  +VI +Y N+      AG I +A +   +M      P+V T+++V++ L           ++      G   +A   N L++   + G  E    V ++  K  CEP+  T++ L+   C   N+E A  +L  M  +  + +  TFN +   + K+                 C PN+ +Y+
Sbjct:  209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK--------DRFEPDVI-VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYN 434          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.689e-16
Identity = 52/217 (23.96%), Postives = 101/217 (46.54%), Query Frame = 3
Query:   78 YTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVL 728
            +  +++ +A+ K FD +  + +  K+++L    + + YN++        +I  A+  L  M      PS+ T + +LN     K   +   +     ++G   D      L+ GL  +     A  ++D   ++ C+PN+ T+  +++GLC++G+++ AF LL +ME+  I+AD V FN +I  L K                    PN  +YS ++
Sbjct:   13 FNKLLSAIAKMKKFDLVISLGE--KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227          

HSP 2 Score: 76.6406 bits (187), Expect = 2.131e-13
Identity = 61/232 (26.29%), Postives = 104/232 (44.83%), Query Frame = 3
Query:   51 KDYNPNEALYTLIINKLAQAKSF---DAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK----------------LYGE-------IQGIY-----TSAAKL-------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 632
            K  NPN   +  +I+   +   F   + + D M +  ++      D F YN +     M  R+ KA +    M S +C+P + T+N ++     +K                L G+       IQG++      +A K+       GV  D    +ILL GLC NG LE A  V D   K   + ++  ++T++ G+C+ G V++ + L   +  +G+  + VT+N +ISGL
Sbjct:  249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP-----DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475          

HSP 3 Score: 75.485 bits (184), Expect = 4.747e-13
Identity = 68/262 (25.95%), Postives = 112/262 (42.75%), Query Frame = 3
Query:   15 TRGSVLNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRF---SDAFFYNVIK------------IYGNMA------GRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            T G V+N   KR D +    L   ++NK+  AK  +A   I   I ++ LC++    DA   N+ K             Y ++       GR   A + L DM      P++ TFN +++  V    + E + ++    K  ++ D    N L+ G C +  L+ A  + +    ++C P++ T++TL+ G C+   VE+   L   M   G+  DTVT+  LI GL                      P+  +YS +L GL
Sbjct:  152 TYGVVVNGLCKRGDID----LAFNLLNKMEAAK-IEADVVIFNTI-IDSLCKYRHVDDAL--NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405          

HSP 4 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 41/153 (26.80%), Postives = 68/153 (44.44%), Query Frame = 3
Query:  279 PSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            PS+  FN +L+ +   K +  +  +     +LG+  +    NIL+   C    +  A  +L +  K   EP++ T S+L++G C    + +A  L+++M   G   DT+TF  LI GL                    C PN  +Y  V+ GL
Sbjct:    8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.512e-16
Identity = 55/227 (24.23%), Postives = 98/227 (43.17%), Query Frame = 3
Query:   48 RKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVL 728
            ++  +P+   Y+ +IN        D  + + +   V K C F D   YN +        R+ + +E   +M       +  T+N+++  L  A      Q I+      GV  +    N LL GLC+NG LE A  V +   +   EP + T++ ++ G+C+ G VE+ + L   +  +G+  D V +N +ISG  ++                   PNS  Y+ ++
Sbjct:  354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE-FMVSKHC-FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578          

HSP 2 Score: 81.2629 bits (199), Expect = 8.651e-15
Identity = 60/238 (25.21%), Postives = 107/238 (44.96%), Query Frame = 3
Query:   24 SVLNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            ++LN+  + K   P   +Y  II+ L + K  D   ++ + ++ + + R +   + ++I    N  GR   A   L DM      P V TF+ +++  V      E + +Y    K  ++      + L+ G C +  L+ A  + +    ++C P+V T++TL+ G C+   VEE   +   M   G+  +TVT+NILI GL +                    PN  +Y+ +L GL
Sbjct:  242 NLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI-RPNVVTYSSLISCLCNY-GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476          

HSP 3 Score: 72.0182 bits (175), Expect = 5.249e-12
Identity = 44/171 (25.73%), Postives = 74/171 (43.27%), Query Frame = 3
Query:  225 RIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            ++  A+    +M     +PS+  F+ +L+ +     +  +  +      LG+  +    +IL+   C    L  A  VL +  K   EPN+ T S+L++G C    + EA  L+++M   G   +TVTFN LI GL                    C P+  +Y  V+ GL
Sbjct:   61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231          

HSP 4 Score: 70.4774 bits (171), Expect = 1.527e-11
Identity = 38/136 (27.94%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  225 RIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 632
            RI +A+  +  M      P+  TFN +++ L       E   +       G + D     +++ GLC+ G+ + AF +L++  +   EP V  ++T++ GLC+  ++++A  L + ME++GI  + VT++ LIS L
Sbjct:  166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301          

HSP 5 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 46/231 (19.91%), Postives = 103/231 (44.59%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRF 755
            P+   ++ +++ +A+   FD +  + +++  + L    + + Y+++        ++  A+  L  M      P++ T + +LN    +K   E   +       G + +    N L+ GL  +     A  ++D    + C+P++ T+  +++GLC++G+ + AF LL +ME   ++   + +N +I GL K                    PN  +YS ++  L +  R+
Sbjct:   79 PSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307          
The following BLAST results are available for this feature:
BLAST of EY728356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PPR79_ARATH2.432e-1731.14Putative pentatricopeptide repeat-containing prote... [more]
PP432_ARATH3.177e-1726.50Pentatricopeptide repeat-containing protein At5g55... [more]
PP120_ARATH3.177e-1721.22Putative pentatricopeptide repeat-containing prote... [more]
PPR9_ARATH1.207e-1625.43Pentatricopeptide repeat-containing protein At1g03... [more]
PPR37_ARATH1.207e-1625.23Pentatricopeptide repeat-containing protein At1g12... [more]
PP152_ARATH1.207e-1627.39Pentatricopeptide repeat-containing protein At2g15... [more]
PPR33_ARATH1.577e-1622.75Pentatricopeptide repeat-containing protein At1g11... [more]
PPR54_ARATH2.689e-1626.44Pentatricopeptide repeat-containing protein At1g20... [more]
PP101_ARATH2.689e-1623.96Pentatricopeptide repeat-containing protein At1g63... [more]
PPR91_ARATH3.512e-1624.23Pentatricopeptide repeat-containing protein At1g62... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728356 ID=EY728356; Name=EY728356; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCGGACGCGTGGGTCAGTTTTGAATCAATACTCCAAGAGA
AAAGACTACAATCCGAATGAAGCTCTTTACACTCTTATCATCAACAAGCT
TGCTCAAGCCAAAAGCTTCGATGCCATTGAAGACATAATGCAAAGAATAA
AAGTTGAAAAACTGTGTCGTTTTTCAGATGCATTTTTTTACAATGTGATC
AAGATTTATGGAAATATGGCTGGGAGAATTGGCAAAGCAATTGAGACCCT
TTTTGATATGCCAAGTTATAATTGTTGGCCGAGTGTCAAAACGTTCAATT
TGGTGCTCAATTTGCTTGTTTCGGCCAAACTGTATGGTGAGATACAGGGG
ATTTACACTAGTGCTGCTAAGCTTGGAGTTGAGATTGATGCTTGTTGTCT
TAACATTCTTCTTAAAGGGTTGTGTGAAAATGGGAATTTGGAGGCTGCAT
TCTACGTGCTCGATGAATTTCCTAAACAAAATTGTGAGCCCAATGTGAGG
ACGTTTTCGACGTTGATGCATGGTTTGTGTGAGAAGGGTAATGTGGAGGA
AGCATTTGGGTTGCTTGAGAGGATGGAAAGTGAGGGAATTGATGCCGATA
CGGTAACGTTTAATATATTGATTTCGGGCCTTAGGAAGCAAGGCAAGGTT
GANGAGGGAATGAAGCTTTTGGAGAAGATGAAGGGTAAAGGGTGTTATCC
AAATTCAGCGTCTTATTCAGAGGTTTTGTATGGTTTGCTTGATAAGAAGA
GGTTCCTGAGGCGAAAGAGCCTGTAGGTAGGATGATTTGTGAGCGTATGA
GTCCTANTTTTGTGTCCTACAAAAAGTTGATCCTGGACTTGGTATCCAAA
ACTGGTTGAGGATGTGGATTGGGTATTAAAAAAAATGTNCACCACGGTTT
GTCCCGAG
back to top