EY728356

Overview
NameEY728356
Unique NameEY728356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3283 contig Csv1_Contig3283:331..1238. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP161_ARATH (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.200e-13
Identity = 46/185 (24.86%), Postives = 85/185 (45.95%), Query Frame = 3
Query:  222 GRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAK-LYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRFLRRKSL 773
            GR+ +A + + ++   +  P   T+N +L  L   K L+   + +        V+ D     IL+  +C + NL  A Y++ +      +P+   ++T+M G C      EA G+ ++M+ EG++ D +T+N LI GL K                    P++A+Y+ ++ G+  K   L   SL
Sbjct:  173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357          

HSP 2 Score: 73.9442 bits (180), Expect = 1.381e-12
Identity = 51/226 (22.57%), Postives = 102/226 (45.13%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDM-PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            P++    + +  L +    D  +D+M+ +  EK     D + YN +  +      +    E + +M   ++  P + +F ++++ + ++K   E   + +     G + D    N ++KG C       A  V  +  ++  EP+  T++TL+ GL + G VEEA   L+ M   G + DT T+  L++G+ ++                 C PN  +Y+ +L+GL
Sbjct:  157 PDQVTTDIAVRSLCETGRVDEAKDLMKEL-TEKHSP-PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380          

HSP 3 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 48/196 (24.49%), Postives = 85/196 (43.37%), Query Frame = 3
Query:   54 DYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFS-DAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 638
            D  P+   +T++I+ +  +K+   + + M  +       F  D F YN I        +  +A+     M      P   T+N ++  L  A    E +    +    G E D      L+ G+C  G    A  +L+E   + C PN  T++TL+HGLC+   +++   L E M+S G+  ++  +  L+  L K
Sbjct:  225 DVKPDLVSFTILIDNVCNSKN---LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 46/174 (26.44%), Postives = 74/174 (42.53%), Query Frame = 3
Query:  222 GRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFP-----------------------------------KQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 638
            G+I KA+    +M      PS+ TF  +L+ L  A L  +   ++   A+  V+ +    N++++G CE G++  AF  L E                                     K NCE N   ++ L+HG C +G +EEA  + + M   G+D D V + +LI G  K
Sbjct:  486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 46/194 (23.71%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   60 NPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 641
            +PN   Y ++I     A + D    +  +++  K C  +   +  +I  Y  +  +I    + L  M      P++ ++N+V+N L       E+  + T   + G  +D    N L+KG C+ GN   A  +  E  +    P+V T+++L+H +C+ GN+  A   L++M   G+  +  T+  L+ G  ++
Sbjct:  202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMET-KGCLPNVVTYNTLIDGYCKLR-KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393          

HSP 2 Score: 74.3294 bits (181), Expect = 1.058e-12
Identity = 57/250 (22.80%), Postives = 109/250 (43.60%), Query Frame = 3
Query:   27 VLNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRFLRRKSL 773
            V++    R    P+   YT +I+ + +A + +   + + +++V  LC   +   Y  +    +  G + +A   L +M      PSV T+N ++N   V+ K+   I  +     + G+  D    + +L G C + +++ A  V  E  ++  +P+  T+S+L+ G CE+   +EA  L E M   G+  D  T+  LI+    +                   P+  +YS ++ GL  + R    K L
Sbjct:  331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC--PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI-AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 50/186 (26.88%), Postives = 86/186 (46.24%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 620
            P++  Y +II  L      +   + +  + + K     +   +NV+       G    A+  L  M SY   P+V T N +++  V      +   +        +  D    N+LL   C  G+L  AF + DE  ++ C+P++ T++ L+ GLC KG +++A  LL R+++ GI  D V F IL
Sbjct:  368 PDQISYKVIIQGLCIHGDVNRANEFL--LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 51/195 (26.15%), Postives = 90/195 (46.15%), Query Frame = 3
Query:   57 YNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMP-SYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 638
            Y P    Y  +   LA  K ++++  I++++K   L    +   + +I+ YG   G + +A+E    +P +  C  +V  +N +L+ L   K++     +     + G++ D     IL+ G C  G ++ A   LDE  ++   P  R    L+ GL   G +E A  ++ +M   G   D  TFNILI  + K
Sbjct:  107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCF-IIEQYGKN-GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISK 299          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP173_ARATH (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana GN=At2g27800 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 51/212 (24.06%), Postives = 97/212 (45.75%), Query Frame = 3
Query:   27 VLNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDM---PSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKL--------GVEIDACCLNILLKGLCENGNLEAAFYVLDEFPK-QNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 626
            + N  S++  +      Y + I KL  AK +  ++DI+ ++   +     +   YN I  Y   AG++ +A+     M    +  C P+++T++++   L+       I  +Y    +         G+E D   LN L+KG   + ++  A  +  +     +CEPN  T+  L+HGLC +G    A  LL  M+ +G   +  ++N L++
Sbjct:  158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVR--HIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVN 367          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP100_ARATH (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 51/220 (23.18%), Postives = 99/220 (45.00%), Query Frame = 3
Query:   15 TRGSVLNQYSKRKDYN---------------PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 629
            T G+V+N   KR D +                N  ++  II+ L + +  +   D+   ++ + + R +   + ++I    N  GR   A   L +M      P+V TFN +++         E + ++    +  ++ D    N+L+ G C +  L+ A  +      ++C PN++T++TL++G C+   VE+   L   M   G+  +TVT+  +I G
Sbjct:  225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI-RPNVVTYNSLINCLCNY-GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442          

HSP 2 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 46/231 (19.91%), Postives = 105/231 (45.45%), Query Frame = 3
Query:   63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRF 755
            P+   +  +++ +A+   F+ +  + ++++   +    D + Y++         ++  A+  L  M      P + T + +LN    +K   +   +     ++G + D      L+ GL  +     A  ++D+  ++ C+P++ T+ T+++GLC++G+++ A  LL +ME+  I A+ V FN +I  L K                    PN  +Y+ ++  L +  R+
Sbjct:   81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH--DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309          

HSP 3 Score: 72.4034 bits (176), Expect = 4.019e-12
Identity = 43/171 (25.15%), Postives = 72/171 (42.11%), Query Frame = 3
Query:  225 RIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            ++  A++   DM     +PS+  FN +L+ +     +  +  +      LG+  D    +I +   C    L  A  VL +  K   EP++ T S+L++G C    + +A  L+++M   G   DT TF  LI GL                    C P+  +Y  V+ GL
Sbjct:   63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233          

HSP 4 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 55/233 (23.61%), Postives = 93/233 (39.91%), Query Frame = 3
Query:   30 LNQYSKRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVL 728
            L++   ++  +P+   Y L+IN        D  +  M +  V K C   +   YN +        R+   +E   +M       +  T+  ++     A      Q ++       V  D    +ILL GLC  G L+ A  +     K   E N+  ++T++ G+C+ G V EA+ L     S  I  D VT+N +ISGL  +                   PNS +Y+ ++
Sbjct:  350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ-MFKFMVSKDC-LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940 OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.058e-12
Identity = 57/233 (24.46%), Postives = 96/233 (41.20%), Query Frame = 3
Query:   45 KRKDYNPNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIE---TLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYG 734
            K K + P E  Y+L++   A+  ++  IE I  RIK  ++  F        + +  N   R     E   TLF    Y   P +  FN +L++     +Y + +GI  S  + G+  D    N L+      G    A  +L    K   +P++ +++T++ G C +G ++EA  +L  M   GI     T+N  +SG                     C PN  ++  V+ G
Sbjct:  553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQI--FPSWMLLRTL-LLANFKCRALAGSERAFTLFKKHGYK--PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR76_ARATH (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.381e-12
Identity = 40/182 (21.98%), Postives = 87/182 (47.80%), Query Frame = 3
Query:   75 LYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNIL 620
            +Y  + + L + K    I D+ +++K +      D F YN++       G + +AI    ++   +C P + ++N ++N L       E    +    + G+  D    + L++   +   +E A+ + +E   + C+PN+ T++ L+  L + G   EA  L  +M+ +G+  D++T+ +L
Sbjct:  444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPS--PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623          
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.381e-12
Identity = 49/177 (27.68%), Postives = 78/177 (44.07%), Query Frame = 3
Query:  219 AGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKK 749
            +G++ K IE L DM       +  ++N ++       L      +     K G++ +    N L+ G C    L+ A  V  E    N  PN  T++TL++G  ++G+ E AF   E M   GI  D +T+N LI GL KQ                   PNS+++S ++ G   +K
Sbjct:  251 SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427          

HSP 2 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 47/173 (27.17%), Postives = 80/173 (46.24%), Query Frame = 3
Query:  222 GRIGKAIETLFDMPSYNCWPSVKTFNLVLN-LLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGL 737
            GR+  A+    +M      P+  T N+V++    S KL   I+ +     +LG        N L+ G CE G L +A  + +   K   +PNV TF+TL+HG C    ++EA  +   M++  +  +TVT+N LI+G  +Q                    +  +Y+ +++GL
Sbjct:  217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE-LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388          

HSP 3 Score: 68.1662 bits (165), Expect = 7.579e-11
Identity = 53/243 (21.81%), Postives = 102/243 (41.98%), Query Frame = 3
Query:   15 TRGSVLNQYSKRKDYNPNEA-LYTLIINKLAQ--AKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYG 734
            T   VL+  +K + +   E+ L  +++N      AK FDA+      +   + C  +   F ++ K + ++  +   A +T   M  Y   P+V++ N  ++ L+           Y    +  +  +   LN+++ G C +G L+    +L +  +        +++TL+ G CEKG +  A  L   M   G+  + VTFN LI G  +                    PN+ +Y+ ++ G
Sbjct:  117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL------LYSYRECDSTPRVFDSLFKTFAHLK-KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352          
The following BLAST results are available for this feature:
BLAST of EY728356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PP161_ARATH6.200e-1324.86Pentatricopeptide repeat-containing protein At2g17... [more]
PP437_ARATH8.097e-1326.44Putative pentatricopeptide repeat-containing prote... [more]
PP407_ARATH8.097e-1323.71Pentatricopeptide repeat-containing protein At5g39... [more]
PP396_ARATH8.097e-1326.88Pentatricopeptide repeat-containing protein At5g24... [more]
PP391_ARATH8.097e-1326.15Pentatricopeptide repeat-containing protein At5g18... [more]
PP173_ARATH8.097e-1324.06Pentatricopeptide repeat-containing protein At2g27... [more]
PP100_ARATH8.097e-1323.18Pentatricopeptide repeat-containing protein At1g63... [more]
PP163_ARATH1.058e-1224.46Pentatricopeptide repeat-containing protein At2g18... [more]
PPR76_ARATH1.381e-1221.98Pentatricopeptide repeat-containing protein At1g51... [more]
PP338_ARATH1.381e-1227.68Pentatricopeptide repeat-containing protein At4g26... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-F07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728356 ID=EY728356; Name=EY728356; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCGGACGCGTGGGTCAGTTTTGAATCAATACTCCAAGAGA
AAAGACTACAATCCGAATGAAGCTCTTTACACTCTTATCATCAACAAGCT
TGCTCAAGCCAAAAGCTTCGATGCCATTGAAGACATAATGCAAAGAATAA
AAGTTGAAAAACTGTGTCGTTTTTCAGATGCATTTTTTTACAATGTGATC
AAGATTTATGGAAATATGGCTGGGAGAATTGGCAAAGCAATTGAGACCCT
TTTTGATATGCCAAGTTATAATTGTTGGCCGAGTGTCAAAACGTTCAATT
TGGTGCTCAATTTGCTTGTTTCGGCCAAACTGTATGGTGAGATACAGGGG
ATTTACACTAGTGCTGCTAAGCTTGGAGTTGAGATTGATGCTTGTTGTCT
TAACATTCTTCTTAAAGGGTTGTGTGAAAATGGGAATTTGGAGGCTGCAT
TCTACGTGCTCGATGAATTTCCTAAACAAAATTGTGAGCCCAATGTGAGG
ACGTTTTCGACGTTGATGCATGGTTTGTGTGAGAAGGGTAATGTGGAGGA
AGCATTTGGGTTGCTTGAGAGGATGGAAAGTGAGGGAATTGATGCCGATA
CGGTAACGTTTAATATATTGATTTCGGGCCTTAGGAAGCAAGGCAAGGTT
GANGAGGGAATGAAGCTTTTGGAGAAGATGAAGGGTAAAGGGTGTTATCC
AAATTCAGCGTCTTATTCAGAGGTTTTGTATGGTTTGCTTGATAAGAAGA
GGTTCCTGAGGCGAAAGAGCCTGTAGGTAGGATGATTTGTGAGCGTATGA
GTCCTANTTTTGTGTCCTACAAAAAGTTGATCCTGGACTTGGTATCCAAA
ACTGGTTGAGGATGTGGATTGGGTATTAAAAAAAATGTNCACCACGGTTT
GTCCCGAG
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