EY728356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12 Identity = 48/187 (25.67%), Postives = 84/187 (44.92%), Query Frame = 3 Query: 63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILI 623 PN Y+ +I+ A+A FD ++ ++ + D YN + GR +A++ L +M S V T+N +L Y E++ ++T + V + + L+ G + G + A + EF +V +S L+ LC+ G V A L++ M EGI + VT+N +I Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL--DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591 HSP 2 Score: 68.9366 bits (167), Expect = 4.443e-11 Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 3 Query: 189 YNVIKIYGNMAGRIGKAIETLFD-MPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 626 YN + G K + FD M P TFN +L + L+ + ++ +E D N LL +C+ G ++ AF +L + P + PNV ++ST++ G + G +EA L M GI D V++N L+S Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12 Identity = 44/153 (28.76%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 177 DAFFYNVIKIYGNMAGR-IGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 632 D F YN + I G G+ + KA+E +M C S+ T+ ++++ A E G +G+E D L++G C+ G L+ + DE ++ P T++TL+ G C+ G ++EA + E M G+ + T+ LI GL Sbjct: 176 DVFSYNTV-IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12 Identity = 52/236 (22.03%), Postives = 101/236 (42.80%), Query Frame = 3 Query: 63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRFLRRKS 770 P+ T++I ++ S E + + +K E L + + N++ YG ++ K E + +M S P V T+N++++ +V E I + + G ++ G + G+ + AF + +P+V T S L+HG C+ +E+A L ++ G+ D V +N LI G PN +++ ++ G L+ KRF+ ++ Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGL-KLDVVTYNNLMHGYGK-THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG-LEGKRFVNSET 673
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP180_ARATH (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana GN=At2g32630 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.169e-11 Identity = 48/207 (23.19%), Postives = 96/207 (46.38%), Query Frame = 3 Query: 27 VLNQYSKRKDYNPNEALYTLIINKLAQAKSFDA---IEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRK 638 +L + K N + ++ +I+ + D I D+M++ + +D F N I N R +A + LF M S ++ ++++ E + ++ + GV+ +A N+++ C+ G ++ A + +P+ T+++L+HG C NV+EA L M +G+D ++VT+ ++ISGL K Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ-----ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSK 586
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11 Identity = 52/188 (27.66%), Postives = 88/188 (46.81%), Query Frame = 3 Query: 63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILIS 626 P+ Y +I+ A+A D D+ QR++ L D F Y+VI AG + A + +M C P++ T+N++++L A+ Y +Y G E D +I+++ L G LE A V E ++N P+ + L+ + GNVE+A+ + M G+ + T N L+S Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS--PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11 Identity = 49/187 (26.20%), Postives = 81/187 (43.32%), Query Frame = 3 Query: 177 DAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNC-WPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYG 734 D Y ++ G I + L DM S S+ +++L+ L E ++ G+ D +I++ GLC+ G + A ++ DE + PN RT L+ GLC+KG + EA LL+ + S G D V +NI+I G K P+ A+++ ++YG Sbjct: 340 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 526
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11 Identity = 57/254 (22.44%), Postives = 105/254 (41.34%), Query Frame = 3 Query: 63 PNEALYTLIINKLAQAKSF--------DAIEDIMQRIKVEKL---------CRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQXXXXXXXXXXXXXXXXXCYPNSASYSEVLYGLLDKKRFLRRKSL 773 PN Y L+++ L +K F + IE ++ +V+ C + F ++K Y + G + + ++ SV T N +LN L+ L + +Y+ ++G+ + NIL C + N L++ ++ EP++ T++TL+ C +G ++EAF L + M + D VT+ LI GL K P+ SY+ ++Y + + K L Sbjct: 111 PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKL-GLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL 363
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11 Identity = 42/151 (27.81%), Postives = 76/151 (50.33%), Query Frame = 3 Query: 189 YNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 641 ++ + IY AG I +I + S P ++ ++LN LV +L + I+ KLGV + N+L+ ++G+ E A +L E ++ P++ T++TL+ C+K EA + +RME G+ + VT+N I G ++ Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSRE 286 HSP 2 Score: 68.9366 bits (167), Expect = 4.443e-11 Identity = 47/190 (24.74%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 63 PNEALYTLIINKLAQAKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGL 632 P+ T+++N L + + D + I + K+ KL ++ YNV+ + +G KA + L +M +P + T+N ++++ ++ E + + GV + N + G G + A + E K + N T++TL+ G C +++EA L E MES G VT+N ++ L Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFK--KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PPR40_ARATH (Pentatricopeptide repeat-containing protein At1g13040, mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11 Identity = 52/201 (25.87%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 48 RKDYNPNEALYTLIINKLAQAKSFD-AIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAA--FYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISGLRKQ 641 R +P+ ++ L A+ D A E + + IK ++ YN + AGRI KA M C P + T+N++LN + +G+ + G+++DA N LLK C + + F V + P+ C+ V ++STL+ C N +A+ L E M +G+ + VT+ LI ++ Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL--STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD--VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
BLAST of EY728356 vs. ExPASy Swiss-Prot
Match: PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11 Identity = 48/190 (25.26%), Postives = 86/190 (45.26%), Query Frame = 3 Query: 63 PNEALYTLIINKLAQ-AKSFDAIEDIMQRIKVEKLCRFSDAFFYNVIKIYGNMAGRIGKAIETLFDMPSYNCWPSVKTFNLVLNLLVSAKLYGEIQGIYTSAAKLGVEIDACCLNILLKGLCENGNLEAAFYVLDEFPKQNCEPNVRTFSTLMHGLCEKGNVEEAFGLLERMESEGIDADTVTFNILISG 629 PN+ L T +IN+ + K +A + L DA Y V+ ++ A E +M P V ++ +++N + I+ + G+ + N+LL G C +G +E A +LDE + PN T+ T++ G C+ G++ EAF L + M+ +G+ D+ + L+ G Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL---GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741 The following BLAST results are available for this feature:
BLAST of EY728356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728356 ID=EY728356; Name=EY728356; organism=Citrus sinensis; type=EST; length=908bpback to top |