EY728351 | Citrus Genome Database

Overview


Name	EY728351
Unique Name	EY728351
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	811

Libraries


Library Name	Type
Sweet orange fruit, development stadium (5 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M28 GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M18 GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M6 GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M3 GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pyogenes serotype M1 GN=clpX PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.206e-14
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1

Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD++VE  +R
Sbjct:  138 PFAIADATSLTEAGYVGEDVENILLKLIQAADYNVERAER 177

HSP 2 Score: 46.2098 bits (108), Expect = 1.206e-14
Identity = 26/56 (46.43%), Postives = 35/56 (62.50%), Query Frame = 3

Query:  174 GENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            GEN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I I+TK++ F+
Sbjct:  192 GENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPNQEMIQIDTKNILFI 245

The following BLAST results are available for this feature:

BLAST of EY728351 vs. ExPASy Swiss-Prot

BLAST of EY728351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
CLPX_STRPM	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRPG	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRPF	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRPD	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRPC	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRPB	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRP8	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRP6	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRP3	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]
CLPX_STRP1	1.206e-14	60.00	ATP-dependent Clp protease ATP-binding subunit clp...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-704-002-F01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY728351 ID=EY728351; Name=EY728351; organism=Citrus sinensis; type=EST; length=811bp
CCACGCGTCCGGCCATTTACCATCACTGATGCAACAGCTTTAACGCAGGC
TGGGTATGTTGGAGAAGACTCGGAATCACTATTGTACCAGTTGTTATCGG
CTGCTGATTTCCACGTGGAAACACCTCAGAGACGGAATCGTCTACATTGA
TTAAGTTGAAAAAAATATTGAAAGGTGAAAATCCAAAAAATGGCAGAAAA
GTTTCGGGCGAAGGAATCTCCACAGGCTTACTCAAAATGCTAAAAAGGAC
TGGCATTAATGTTCCCCCACCTGATAACGGAACTCGGAAACCTCCCCCTT
GGGAAAACATTCCAATTGAAACCAAAGACCTGCCTTTCCTATCGTTGTGG
GGCCCTTCGCTGCTTTCCGACAAGCCGACTCCCACAAACCCCCCGAGCCC
TCTGTCCGCGGTCGGGCGCCTGCTCTCCCCCACATGCCAACGCCTTGTCT
GCGGGTACGCCGGTGGCATCCCCGTTGTGTGTCGCTGGATAGGGCAGGCG
TTCGGGTGTTGATGTGCCTGGTCCGGGGGCGCGCGCACGGCCCCTCTACG
TCGCAACGTCCTCTTGTGACTGGCGTCTGCACGCAGTGATTCGTAGTCAT
CCGCAAAGGTGGGGTTTGGGCTTCGGGGCGTGCGGGCACGAGGAGGTGGT
AGCTGTCCCCGGGGTTATCCGGTGTGTGGCGCCCATACGGTCTTCTCCCC
CGGAGCCGATGTGTGTGGCTGAGGATTATCTACTTCTCCGTGTCCCGACC
GCCGGCGTGTACTTGATCTGAGTCGGCGGATGCCACCCCAGGTCTCTCCG
CGCTCCAGGCA