EY728351

Overview
NameEY728351
Unique NameEY728351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRPN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pneumoniae GN=clpX PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.644e-14
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DATALT+AGYVGED E++L +LL  ADF++E  +R
Sbjct:  139 PFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAER 178

HSP 2 Score: 43.8986 bits (102), Expect = 2.644e-14
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            EN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I ++TK++ F+
Sbjct:  194 ENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPQQEMIQVDTKNILFI 246
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP7 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pneumoniae (strain 70585) GN=clpX PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.644e-14
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DATALT+AGYVGED E++L +LL  ADF++E  +R
Sbjct:  139 PFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAER 178

HSP 2 Score: 43.8986 bits (102), Expect = 2.644e-14
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            EN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I ++TK++ F+
Sbjct:  194 ENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPQQEMIQVDTKNILFI 246
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=clpX PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.644e-14
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DATALT+AGYVGED E++L +LL  ADF++E  +R
Sbjct:  139 PFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAER 178

HSP 2 Score: 43.8986 bits (102), Expect = 2.644e-14
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            EN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I ++TK++ F+
Sbjct:  194 ENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPQQEMIQVDTKNILFI 246
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_STRP2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=clpX PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.644e-14
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DATALT+AGYVGED E++L +LL  ADF++E  +R
Sbjct:  139 PFAIADATALTEAGYVGEDVENILLKLLQVADFNIERAER 178

HSP 2 Score: 43.8986 bits (102), Expect = 2.644e-14
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            EN    R VSGEG+   LLK+++ T  +VPP   G RK P  E I ++TK++ F+
Sbjct:  194 ENVSITRDVSGEGVQQALLKIIEGTVASVPP--QGGRKHPQQEMIQVDTKNILFI 246
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_SYNS3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Synechococcus sp. (strain CC9311) GN=clpX PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.426e-14
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF + DAT LT+AGYVGED E++L +LL  AD  VE  QR
Sbjct:  163 PFAVADATTLTEAGYVGEDVENILLRLLQKADMDVEQAQR 202

HSP 2 Score: 47.3654 bits (111), Expect = 3.426e-14
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            ENP   R VSGEG+   LLKML+ T  NVPP   G RK P  + I I+T  + F+
Sbjct:  218 ENPSITRDVSGEGVQQALLKMLEGTVANVPP--QGGRKHPYQDCIQIDTSQILFI 270
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_TRIEI (ATP-dependent Clp protease ATP-binding subunit clpX OS=Trichodesmium erythraeum (strain IMS101) GN=clpX PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.427e-14
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF + DAT LT+AGYVGED E++L +LL  AD  V+  QR
Sbjct:  163 PFAVADATTLTEAGYVGEDVENILLRLLQVADLEVDEAQR 202

HSP 2 Score: 47.7506 bits (112), Expect = 3.427e-14
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            ENP   R VSGEG+   LLKML+ T  NVPP   G RK P  + I I+T ++ F+
Sbjct:  218 ENPSITRDVSGEGVQQALLKMLEGTVANVPP--QGGRKHPYQDCIQIDTSNILFI 270
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_PROMA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Prochlorococcus marinus GN=clpX PE=3 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 3.427e-14
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF + DAT LT+AGYVGED E++L +LL  +D  VE  QR
Sbjct:  160 PFAVADATTLTEAGYVGEDVENILLRLLQKSDMDVELAQR 199

HSP 2 Score: 48.521 bits (114), Expect = 3.427e-14
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            ENP   R VSGEG+   LLKML+ T  NVPP   G RK P  ++I I+T  + F+
Sbjct:  215 ENPSITRDVSGEGVQQALLKMLEGTIANVPP--QGGRKHPYQDSIQIDTSQILFI 267
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_THEPX (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermoanaerobacter sp. (strain X514) GN=clpX PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 3.432e-14
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD+ +E  ++
Sbjct:  135 PFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEK 174

HSP 2 Score: 46.9802 bits (110), Expect = 3.432e-14
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            ENP   R VSGEG+   LLK+L+ T  NVPP   G RK P  E I I+T ++ F+
Sbjct:  190 ENPSITRDVSGEGVQQALLKILEGTIANVPP--QGGRKHPHQEFIQIDTTNILFI 242
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_THEP3 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=clpX PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 3.432e-14
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT+LT+AGYVGED E++L +L+ AAD+ +E  ++
Sbjct:  135 PFAIADATSLTEAGYVGEDVENILLKLIQAADYDIEKAEK 174

HSP 2 Score: 46.9802 bits (110), Expect = 3.432e-14
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            ENP   R VSGEG+   LLK+L+ T  NVPP   G RK P  E I I+T ++ F+
Sbjct:  190 ENPSITRDVSGEGVQQALLKILEGTIANVPP--QGGRKHPHQEFIQIDTTNILFI 242
[Close]
BLAST of EY728351 vs. ExPASy Swiss-Prot
Match: CLPX_LACRD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Lactobacillus reuteri (strain DSM 20016) GN=clpX PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.434e-14
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1 
Query:   13 PFTITDATALTQAGYVGEDSESLLYQLLSAADFHVETPQR 132
            PF I DAT LT+AGYVGED E+++ +LL AADF VE  ++
Sbjct:  138 PFAIADATTLTEAGYVGEDVENIILKLLQAADFDVERAEK 177

HSP 2 Score: 45.8246 bits (107), Expect = 3.434e-14
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 3 
Query:  177 ENPKNGRKVSGEGISTGLLKMLKRTGINVPPPDNGTRKPPPWENIPIETKDLPFL 341
            EN    R VSGEG+   LLK+L+ T  NVPP   G RK P  E I ++TK++ F+
Sbjct:  193 ENVSITRDVSGEGVQQALLKILEGTIANVPP--QGGRKHPQQEFIQVDTKNILFI 245
The following BLAST results are available for this feature:
BLAST of EY728351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPX_STRPN2.644e-1462.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_STRP72.644e-1462.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_STRP42.644e-1462.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_STRP22.644e-1462.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_SYNS33.426e-1460.00ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_TRIEI3.427e-1457.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_PROMA3.427e-1457.50ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_THEPX3.432e-1455.00ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_THEP33.432e-1455.00ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPX_LACRD3.434e-1460.00ATP-dependent Clp protease ATP-binding subunit clp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-F01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728351 ID=EY728351; Name=EY728351; organism=Citrus sinensis; type=EST; length=811bp
CCACGCGTCCGGCCATTTACCATCACTGATGCAACAGCTTTAACGCAGGC
TGGGTATGTTGGAGAAGACTCGGAATCACTATTGTACCAGTTGTTATCGG
CTGCTGATTTCCACGTGGAAACACCTCAGAGACGGAATCGTCTACATTGA
TTAAGTTGAAAAAAATATTGAAAGGTGAAAATCCAAAAAATGGCAGAAAA
GTTTCGGGCGAAGGAATCTCCACAGGCTTACTCAAAATGCTAAAAAGGAC
TGGCATTAATGTTCCCCCACCTGATAACGGAACTCGGAAACCTCCCCCTT
GGGAAAACATTCCAATTGAAACCAAAGACCTGCCTTTCCTATCGTTGTGG
GGCCCTTCGCTGCTTTCCGACAAGCCGACTCCCACAAACCCCCCGAGCCC
TCTGTCCGCGGTCGGGCGCCTGCTCTCCCCCACATGCCAACGCCTTGTCT
GCGGGTACGCCGGTGGCATCCCCGTTGTGTGTCGCTGGATAGGGCAGGCG
TTCGGGTGTTGATGTGCCTGGTCCGGGGGCGCGCGCACGGCCCCTCTACG
TCGCAACGTCCTCTTGTGACTGGCGTCTGCACGCAGTGATTCGTAGTCAT
CCGCAAAGGTGGGGTTTGGGCTTCGGGGCGTGCGGGCACGAGGAGGTGGT
AGCTGTCCCCGGGGTTATCCGGTGTGTGGCGCCCATACGGTCTTCTCCCC
CGGAGCCGATGTGTGTGGCTGAGGATTATCTACTTCTCCGTGTCCCGACC
GCCGGCGTGTACTTGATCTGAGTCGGCGGATGCCACCCCAGGTCTCTCCG
CGCTCCAGGCA
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