EY728338

Overview
NameEY728338
Unique NameEY728338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL6_HUMAN (ADP-ribosylation factor-like protein 6 OS=Homo sapiens GN=ARL6 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.005e-33
Identity = 72/167 (43.11%), Postives = 113/167 (67.66%), Query Frame = 3
Query:  144 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            KKE+ +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+DR R+V A +EL  +LN  ++  R   +L FANK DL +A+ + +++  L L +++ + W+I ++ A  GEGL EG+DWL + I
Sbjct:   15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.313e-33
Identity = 71/167 (42.51%), Postives = 114/167 (68.26%), Query Frame = 3
Query:  144 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            KKE+ +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY+++ Q +IFV+DS+D+ R+V A +EL  +LN  ++  R   +L FANK DL +++ + +++  L L S++ + W+I ++ A  GEGL EG+DWL + I
Sbjct:   15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL4D_MOUSE (ADP-ribosylation factor-like protein 4D OS=Mus musculus GN=Arl4d PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.714e-33
Identity = 73/169 (43.20%), Postives = 109/169 (64.50%), Query Frame = 3
Query:  153 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 641
            + ++++GLD+AGKT++LY+LK  E V ++PT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVDS + +R+ EA  ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q+  A  G GL +GL+ L   I  +
Sbjct:   22 LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDSAEIERLEEAKVELHRISKASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQACSAVDGLGLQQGLERLYEMILKR 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 3
Query:  144 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 620
            K E +++M+GLD+AGKTTILYKLK  ++V T+PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANKQ+ P A+   EI ++LGL   ++  W +++  A +G+GL E L  L
Sbjct:   10 KAEAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGFQKHCWELRACSALTGQGLQEALQSL 169          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 70/167 (41.92%), Postives = 112/167 (67.07%), Query Frame = 3
Query:  144 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            KKE+ +L +GLD +GKTTI+ KLK     +   +PTIGF+++  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+D+ R+V A +EL  +LN  ++  R   +L FANK DL +A+ + +++  L L  ++ + W+I ++ A  GEGL EG+DWL + I
Sbjct:   15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDWLQDQI 181          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL4D_PONAB (ADP-ribosylation factor-like protein 4D OS=Pongo abelii GN=ARL4D PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 72/169 (42.60%), Postives = 108/169 (63.91%), Query Frame = 3
Query:  153 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 641
            + ++++GLD+AGKT++LY+LK  E V ++PT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA  ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q   A  G GL +GL+ L   I  +
Sbjct:   22 LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQGCSAVDGLGLQQGLERLYEMILKR 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL4D_HUMAN (ADP-ribosylation factor-like protein 4D OS=Homo sapiens GN=ARL4D PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.924e-33
Identity = 72/169 (42.60%), Postives = 108/169 (63.91%), Query Frame = 3
Query:  153 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 641
            + ++++GLD+AGKT++LY+LK  E V ++PT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA  ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q   A  G GL +GL+ L   I  +
Sbjct:   22 LHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQGCSAVDGLGLQQGLERLYEMILKR 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL4D_BOVIN (ADP-ribosylation factor-like protein 4D OS=Bos taurus GN=ARL4D PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.988e-33
Identity = 73/169 (43.20%), Postives = 107/169 (63.31%), Query Frame = 3
Query:  153 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEGLDWLSNNIANK 641
            + ++++GLD+AGKT++LY+LK  E V +IPT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA  ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q   A  G GL  GL+ L   I  +
Sbjct:   21 LHVVVIGLDSAGKTSLLYRLKFKEFVQSIPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELATATLTHVQGCSAVDGLGLQPGLERLYEMILKR 189          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.233e-32
Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 641
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP W++YF+NT  L                 EL  +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 163          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.406e-32
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 3
Query:  144 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 620
            K E +++M+GLD+AGKTT+LYKLK  ++V T+PT+GFNVE ++   ++S T+WDVGGQ  +R  W+ Y + T  L++V+DS D  R+ E+  EL  +LN+  +     LV ANKQ+ P+A+   +I ++L L   +   W ++   A +GEGL E L  L
Sbjct:   10 KAEAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEGLPEALQSL 169          
The following BLAST results are available for this feature:
BLAST of EY728338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL6_HUMAN1.005e-3343.11ADP-ribosylation factor-like protein 6 OS=Homo sap... [more]
ARL6_MOUSE1.313e-3342.51ADP-ribosylation factor-like protein 6 OS=Mus musc... [more]
ARL4D_MOUSE1.714e-3343.20ADP-ribosylation factor-like protein 4D OS=Mus mus... [more]
ARL11_MOUSE2.239e-3343.13ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
ARL6_BOVIN2.924e-3341.92ADP-ribosylation factor-like protein 6 OS=Bos taur... [more]
ARL4D_PONAB2.924e-3342.60ADP-ribosylation factor-like protein 4D OS=Pongo a... [more]
ARL4D_HUMAN2.924e-3342.60ADP-ribosylation factor-like protein 4D OS=Homo sa... [more]
ARL4D_BOVIN4.988e-3343.20ADP-ribosylation factor-like protein 4D OS=Bos tau... [more]
ARL3_PONAB3.233e-3243.03ADP-ribosylation factor-like protein 3 OS=Pongo ab... [more]
ARL11_HUMAN9.406e-3242.50ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-D11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728338 ID=EY728338; Name=EY728338; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCCCACGCGTCCGCTCTTATTTTTATAGAGAGAGAGAGGG
GCAGTAGATCTGCACCAAGGCAAAAACCGCTCTCTTCCTCAGTTGTGAAA
AATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAAAG
AGATGAGAATTCTCATGGTAGGTCTCGATGCAGCTGGTAAGACTACTATC
CTGTACAAGCTTAAGCTCGGAGAGATCGTCACCACCATTCCTACCATTGG
ATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCTGGG
ATGTCGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTCCAA
AACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCGTGT
GGTAGAAGCTANGGATGAGTTGCACAGAATGTTGAATGAGGATGAATTGA
GAGATGCTGTGCTGCTTGTATTTGCTAACAAGCAAGATCTTCCAAATGCA
ATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCGCCA
GCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGCTGT
ATGAAGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAGACA
ACTAATTTTGAGTTTTGGGTTGCCCGCACTGCTGAAATAAGAGTTAAAAC
ACCTCTCAAGTGTCTTGGCTTCCTCCTGTGATACCTTCGGTGCCGTGTTA
CCGGGTTTGTTGTTTCCCTTGCAACGTTGAAATTGGTTTTGGTACTTCGA
AAAATCGCGAAGGTAACTTTCCCCTGGTGTCCCCACAACAGAAAAAAAAA
AGGGGGGCNNAGACCGAT
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