EY728338

Overview
NameEY728338
Unique NameEY728338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.260e-20
Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            K  ++L +GLD AGKTT+L+ LK   + T  PT+    E +   ++ FT +D+GG  + R LW+ YF    G++F+VD+ D +R  E+  EL  +   +EL     L+  NK D  +A+   E+   LGL++            QR   +         G  +G  WLS  I
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYNTTGKDTGKLPEGQRPIEVFMVSVVMRMGYGDGFKWLSQYI 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.079e-19
Identity = 57/174 (32.76%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            K  ++L +GLD AGKTT+L+ LK   +    PT+    E +   N+ FT +D+GG  + R LWR YF    G++++VD  D +R+ E+  EL  +L  +EL     L+  NK D P A++  E+   LGL+             +R    ++ S     G G  EG  WL+  +
Sbjct:   19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYG--EGFKWLAQYV 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.840e-19
Identity = 50/131 (38.17%), Postives = 77/131 (58.78%), Query Frame = 3
Query:  144 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 536
            +K+ +IL +GLD AGKTT+L+ LK   +V   PT     E +   NI F  +D+GG    R +WR Y+     ++++VD+NDR+R  EA  EL  +L+++ L +   L+  NK D+P A +  E+   LGL
Sbjct:   18 QKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGL 148          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.139e-19
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            K  ++L +GLD AGKTT+L+ LK   +    PT     E +   N  FT +D+GG  + R LW+ YF    G++F+VD+ D +   E+  EL  +L  +EL     L+  NK D P+A++  ++  +LGL+            +R    ++ S     G G  EG+ WLS  +
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.139e-19
Identity = 60/183 (32.79%), Postives = 96/183 (52.46%), Query Frame = 3
Query:  108 LSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPN--------AMNAAEIT--DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 626
            LSF  L++     K  +IL +GLD AGKTT+L  LK G + + +PT     E +   NI F  +D+GG +  R LW+ Y+ +   +++++DS+ +DR VE+  EL  +L+ DEL +   L+  NK D+ N        ++   + T   K  L+ +R    ++ S       G  EG  WL+N
Sbjct:   11 LSFLGLYN-----KNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGNTSEEKFRASLGLTQTTGKGKTTLNGVRPIEVFMCS--VVKRYGYAEGFRWLAN 186          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.099e-19
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            K  ++L +GLD AGKTT+L+ LK   + T  PT     E +   N+ FT +D+GG ++ R +W+ YF    G++++VD  D +R  E+  EL  +L  +EL    +LV  NK D   A++  E+   LGL +            QR   + +      +G  EG+ WLS  I
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKDKVQLVEGQRPLEVFTCSIYLRQGYGEGIRWLSQYI 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.099e-19
Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH---WYIQSTCATSGEG------LYEGLDWLSNNIA 635
            +++ ++MVGLD AGKT     ++        PT+GF+   +       T++D+GG  +IR +W++Y+  + G+IFVVDS+D +R+ E  + +  +L    +    +LV ANKQD   A+  A++ + L L  L   H     I+   A  G G      + +GL WL + IA
Sbjct:   20 RKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWLLHIIA 191          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19
Identity = 57/169 (33.73%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            K  ++L +GLD AGKTT+L+ LK   + T  PT     E +   +I FT +D+GG  + R LW+ YF    G++F+VD+ D +R  EA  EL  +    EL+    ++  NK D P+A++  E+   LGL +         QR   +         G  E   WLS  I
Sbjct:   22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL15_PONAB (ADP-ribosylation factor-like protein 15 OS=Pongo abelii GN=ARL15 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  141 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 641
            A+ E  ++ +GL  +GKT++L KL        + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  A +ELH  L   +L     L+ AN QD P A +  EI     L  L R + W +Q       + L +    L N +  K
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDMDALKDSFSQLINLLEEK 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL15_HUMAN (ADP-ribosylation factor-like protein 15 OS=Homo sapiens GN=ARL15 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19
Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  141 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 641
            A+ E  ++ +GL  +GKT++L KL        + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  A +ELH  L   +L     L+ AN QD P A +  EI     L  L R + W +Q       + L +    L N +  K
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDMDALKDSFSQLINLLEEK 197          
The following BLAST results are available for this feature:
BLAST of EY728338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAR1_DEBHA8.260e-2031.98Small COPII coat GTPase SAR1 OS=Debaryomyces hanse... [more]
SAR1_SCHPO1.079e-1932.76Small COPII coat GTPase sar1 OS=Schizosaccharomyce... [more]
SAR2_SOLLC1.840e-1938.17GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]
SAR1_ASPNG3.139e-1932.37Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
SAR1A_DICDI3.139e-1932.79GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
SAR1_PICPG4.099e-1933.14Small COPII coat GTPase SAR1 OS=Pichia pastoris (s... [more]
AR13B_MOUSE4.099e-1931.98ADP-ribosylation factor-like protein 13B OS=Mus mu... [more]
SAR1_ASHGO5.354e-1933.73Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN... [more]
ARL15_PONAB5.354e-1933.14ADP-ribosylation factor-like protein 15 OS=Pongo a... [more]
ARL15_HUMAN5.354e-1933.14ADP-ribosylation factor-like protein 15 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-D11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728338 ID=EY728338; Name=EY728338; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCCCACGCGTCCGCTCTTATTTTTATAGAGAGAGAGAGGG
GCAGTAGATCTGCACCAAGGCAAAAACCGCTCTCTTCCTCAGTTGTGAAA
AATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAAAG
AGATGAGAATTCTCATGGTAGGTCTCGATGCAGCTGGTAAGACTACTATC
CTGTACAAGCTTAAGCTCGGAGAGATCGTCACCACCATTCCTACCATTGG
ATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCTGGG
ATGTCGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTCCAA
AACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCGTGT
GGTAGAAGCTANGGATGAGTTGCACAGAATGTTGAATGAGGATGAATTGA
GAGATGCTGTGCTGCTTGTATTTGCTAACAAGCAAGATCTTCCAAATGCA
ATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCGCCA
GCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGCTGT
ATGAAGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAGACA
ACTAATTTTGAGTTTTGGGTTGCCCGCACTGCTGAAATAAGAGTTAAAAC
ACCTCTCAAGTGTCTTGGCTTCCTCCTGTGATACCTTCGGTGCCGTGTTA
CCGGGTTTGTTGTTTCCCTTGCAACGTTGAAATTGGTTTTGGTACTTCGA
AAAATCGCGAAGGTAACTTTCCCCTGGTGTCCCCACAACAGAAAAAAAAA
AGGGGGGCNNAGACCGAT
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