EY728338

Overview
NameEY728338
Unique NameEY728338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL15_BOVIN (ADP-ribosylation factor-like protein 15 OS=Bos taurus GN=ARL15 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.354e-19
Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  141 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSN 626
            A+ E  ++ +GL  +GKT++L KL      + + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  A +ELH  L   +L     L+ AN QD P A +  E+     L  L R + W +Q       E L +    L N
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSKLCSESPDSVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEVKKYFELEPLARGKRWILQPCSLDDMEALKDSFSQLIN 192          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.132e-19
Identity = 59/169 (34.91%), Postives = 83/169 (49.11%), Query Frame = 3
Query:  147 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            K  ++L +GLD AGKTT+L+ LK   + T  PT     E +   NI FT +D+GG  + R LW+ YF    G++F+VD+ D +R  EA  EL  +    EL +    V  NK D P+A++  E+   LGL +         QR   +         G  E   WLS  I
Sbjct:   22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMNTTGYTKIEGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.193e-18
Identity = 54/188 (28.72%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE+  EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+             L  R   +        +G  EG  WLS  I
Sbjct:   11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.193e-18
Identity = 54/188 (28.72%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE+  EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+             L  R   +        +G  EG  WLS  I
Sbjct:   11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.558e-18
Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+ +EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   11 GFSSVLQFLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.034e-18
Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+ +EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   11 GFSSVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.034e-18
Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+ +EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   11 GFSSVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: ARL15_MOUSE (ADP-ribosylation factor-like protein 15 OS=Mus musculus GN=Arl15 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.034e-18
Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  141 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS-NDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 641
            A+ E  ++ +GL  +GKT++L +L        + T GF+++ V ++N    V ++GG D IR  W  Y+Q +QG+IFV+DS +  D +  A +ELH  L   +L     L+ AN QD P A +  EI     L  L R + W +Q       + L +    L N +  K
Sbjct:   29 ARPEYDLVCIGLTGSGKTSLLSELCSESPENVVSTTGFSIKAVPFQNAVLNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPLARGKRWILQPCSLDDVDTLKDSFSQLINLLEEK 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.657e-18
Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+ +EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   11 GFSSVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
BLAST of EY728338 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.657e-18
Identity = 52/188 (27.66%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  105 GLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAXDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 632
            G S    F  L+ KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+ +EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++  I
Sbjct:   11 GFSSVLQFLGLY-KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
The following BLAST results are available for this feature:
BLAST of EY728338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL15_BOVIN5.354e-1933.54ADP-ribosylation factor-like protein 15 OS=Bos tau... [more]
SAR1_KLULA9.132e-1934.91Small COPII coat GTPase SAR1 OS=Kluyveromyces lact... [more]
SAR1A_PONAB1.193e-1828.72GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN1.193e-1828.72GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]
SAR1B_MOUSE1.558e-1827.66GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
SAR1B_HUMAN2.034e-1827.66GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B... [more]
SAR1B_CRIGR2.034e-1827.66GTP-binding protein SAR1b OS=Cricetulus griseus GN... [more]
ARL15_MOUSE2.034e-1832.54ADP-ribosylation factor-like protein 15 OS=Mus mus... [more]
SAR1B_RAT2.657e-1827.66GTP-binding protein SAR1b OS=Rattus norvegicus GN=... [more]
SAR1B_PIG2.657e-1827.66GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-D11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728338 ID=EY728338; Name=EY728338; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCCCACGCGTCCGCTCTTATTTTTATAGAGAGAGAGAGGG
GCAGTAGATCTGCACCAAGGCAAAAACCGCTCTCTTCCTCAGTTGTGAAA
AATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAAAG
AGATGAGAATTCTCATGGTAGGTCTCGATGCAGCTGGTAAGACTACTATC
CTGTACAAGCTTAAGCTCGGAGAGATCGTCACCACCATTCCTACCATTGG
ATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCTGGG
ATGTCGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTCCAA
AACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCGTGT
GGTAGAAGCTANGGATGAGTTGCACAGAATGTTGAATGAGGATGAATTGA
GAGATGCTGTGCTGCTTGTATTTGCTAACAAGCAAGATCTTCCAAATGCA
ATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCGCCA
GCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGCTGT
ATGAAGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAGACA
ACTAATTTTGAGTTTTGGGTTGCCCGCACTGCTGAAATAAGAGTTAAAAC
ACCTCTCAAGTGTCTTGGCTTCCTCCTGTGATACCTTCGGTGCCGTGTTA
CCGGGTTTGTTGTTTCCCTTGCAACGTTGAAATTGGTTTTGGTACTTCGA
AAAATCGCGAAGGTAACTTTCCCCTGGTGTCCCCACAACAGAAAAAAAAA
AGGGGGGCNNAGACCGAT
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