EY728308

Overview
NameEY728308
Unique NameEY728308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.167e-40
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 1
Query:    4 RVRANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            R  +NA+SGM V  D +  FLEL+ K+ +R+++FKIEEKQKQVVVEK G  ++SY++F ASLP ++CRYA+YDFDFVT EN QKSKI FIAW                                      SP TS++R+KM+Y++SKDR K+ELDG    +QATDPTE+ L+V+R R +
Sbjct:    5 RSHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAW--------------------------------------SPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLRERAH 145          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.599e-40
Identity = 79/179 (44.13%), Postives = 117/179 (65.36%), Query Frame = 1
Query:    4 RVRANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            R RANA+SG+ V  +CK  FLEL+ K+++R+++FKI++K K+VVVEK G  ++S+++F  SLP  +CRYA+YDFDFVT+ENCQKSKI F+AW                                      SP  S++R+KM+YA+SK+RF+RELDG+   +QATDP+E+ ++++R R +
Sbjct:    5 RSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAW--------------------------------------SPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.512e-37
Identity = 77/174 (44.25%), Postives = 112/174 (64.37%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            AN++SG+A+ DDCKLKF EL++KR +RFI F ++ K K+++V+K+G+ + SYE+FT+SLP  +CR+A+YDFDF+T E+  KS+I +I W                                      SPD +KVRSKM+YASS +RFK+EL+GIQ+ +QATD  E+ LD ++ R
Sbjct:    2 ANSSSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILW--------------------------------------SPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36
Identity = 76/172 (44.19%), Postives = 105/172 (61.05%), Query Frame = 1
Query:   19 AASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            A +GM V D+C   F+++K K+ +R+IVFKIEEK ++V V+K+G   +SY +   SLP D+CRYAV+DFDFVT +NC+KSKI FIAW                                      SP+ SK+R+K++YA+SKD  +R L+GI   LQATDPTEMG D+++ R
Sbjct:    8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAW--------------------------------------SPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDR 141          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.652e-36
Identity = 78/174 (44.83%), Postives = 112/174 (64.37%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            ANA SG+AV+D+C LKF EL++KR +RFI FK+++K K++VV+++G+ + SY++FT SLP ++CRYA+YDFDFVT E+ QKS+I +I W                                      SP ++KV+SKM+YASS  +FK  L+GIQV LQATD +E+ LD ++ R
Sbjct:    2 ANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILW--------------------------------------SPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDR 137          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 71/168 (42.26%), Postives = 105/168 (62.50%), Query Frame = 1
Query:   37 VDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            V +  K  F ELK ++ +R+++FKI+++++++VVEK G P +SY++FTASLPAD+CRYAVYD DFV+D+NC+KSKI FI+W                                      SP  S++R+K IYA S+++F+ ELDG+   +QATDP +M L+V+R R N
Sbjct:   20 VPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISW--------------------------------------SPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.635e-34
Identity = 72/172 (41.86%), Postives = 103/172 (59.88%), Query Frame = 1
Query:   19 AASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            A  GM V ++C+  F+E+K K+ +RF+V+KI+E+ + V+V+K+G P + YE   A+LP D+CRYAV+DFDFVT +NCQKSKI FIAW                                      SP  S++R+K++YA+SK   +R LDG+   +QATD +EMG DV+R R
Sbjct:    8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAW--------------------------------------SPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGR 141          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.077e-33
Identity = 69/164 (42.07%), Postives = 98/164 (59.76%), Query Frame = 1
Query:   43 DDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSR 534
            DDCK  F+E+K K+ +R++V+K+EEK ++V V+K+G   +SY++  ASLP D+CRYAV+DFD+VT +NC+ SKI FI W                                      SP+ S++R KM+YA+SK   +R LDG+   LQATDPTEMG D ++ R
Sbjct:    3 DDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITW--------------------------------------SPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDR 128          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.527e-32
Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 1
Query:   13 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPSDSYENFTASLPADECRYAVYDFDFVTDE-----------NCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            ANA SG+AV ++CK +F EL+A R +RF+VFKI++  +QVVV+++G     ++  TASLPAD CRYAVYD DF   +              +SKI F++W                                      SP  + VRSKM+YASS + FK+ELDG+Q+ LQATDP+E+ LDV++  T+
Sbjct:    2 ANATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSW--------------------------------------SPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150          
BLAST of EY728308 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31
Identity = 82/176 (46.59%), Postives = 97/176 (55.11%), Query Frame = 1
Query:   31 MAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEK------LGEPSDSYENFTASLPADECRYAVYDFDFVTDENCQKSKIIFIAW*LVNDKGFIFDSSILLFVSITXXXXXXXXXXXXXXXSRSPDTSKVRSKMIYASSKDRFKRELDGIQVXLQATDPTEMGLDVMRSRTN 540
            M + DDCKL FLELK +RT+R IV+KIE+   QV+VEK       GE   SYE F  SLPADECRYA+ D +FV  E     KI FIAW                                      SP T+K+R KMIY+S+KDRFKRELDGIQV   ATD T++ LD +R R N
Sbjct:    1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAW--------------------------------------SPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133          
The following BLAST results are available for this feature:
BLAST of EY728308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ADF2_ORYSJ1.167e-4048.04Actin-depolymerizing factor 2 OS=Oryza sativa subs... [more]
ADF11_ORYSJ2.599e-4044.13Actin-depolymerizing factor 11 OS=Oryza sativa sub... [more]
ADF4_ORYSJ3.512e-3744.25Actin-depolymerizing factor 4 OS=Oryza sativa subs... [more]
ADF5_ARATH5.072e-3644.19Actin-depolymerizing factor 5 OS=Arabidopsis thali... [more]
ADF3_MAIZE8.652e-3644.83Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 ... [more]
ADF10_ORYSJ4.294e-3542.26Actin-depolymerizing factor 10 OS=Oryza sativa sub... [more]
ADF5_ORYSJ3.635e-3441.86Actin-depolymerizing factor 5 OS=Oryza sativa subs... [more]
ADF9_ARATH3.077e-3342.07Actin-depolymerizing factor 9 OS=Arabidopsis thali... [more]
ADF3_ORYSJ1.527e-3240.11Actin-depolymerizing factor 3 OS=Oryza sativa subs... [more]
ADF11_ARATH8.380e-3146.59Putative actin-depolymerizing factor 11 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-B02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728308 ID=EY728308; Name=EY728308; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGGCAAATGCAGCATCTGGAATGGCAGTCGACGATGACTG
CAAGCTGAAGTTTTTGGAATTGAAGGCAAAAAGGACTTACCGCTTCATAG
TTTTCAAGATTGAAGAGAAGCAGAAGCAGGTTGTTGTGGAGAAGCTTGGT
GAACCATCTGATAGTTATGAGAATTTCACTGCTAGCCTCCCAGCGGATGA
GTGCCGATACGCTGTCTACGATTTTGACTTTGTGACTGATGAGAACTGCC
AGAAGAGCAAGATTATTTTCATTGCATGGTAATTGGTCAATGATAAAGGA
TTTATTTTCGATTCTTCGATCCTTTTGTTTGTTTCCATCACAATTTTGCC
TTAATATTTCATACTAATAAATTTGTTGATTTACATATCAAGGTCCCCCG
ACACCTCAAAGGTGAGAAGCAAGATGATTTATGCTAGCTCCAAGGACAGG
TTCAAGAGAGAATTGGATGGAATTCAGGTANAGTTGCAGGCTACTGATCC
TACTGAGATGGGTCTTGATGTCATGAGAAGCCGCACAAATTANATTTTAG
ACTTGCCTATGGGTGCATGGAAAGCCCATACTATATTGTCCACTTAGATG
TAATGTCTATATCTTTGATGACTTATGACTTGGCTTGCTATCAGCCTGTG
GTCGGGAGTGAATAACTTTTTGAAGTGGCCGCGCCTTTGGTGATATCTGG
GGGTTAATAGGGGGAGGGTCCCCCGTGGTGTGGGTGCGGTGCCGAGCTAG
CATTAATGGTTGGTGGGGGGTCGGTCTCCGCGTTGGCCCGGGTGTCGGGC
GACGGGGGTGGTGGGCGGGGTGGCGGGGTGACCCGGCGGTTGTGCGTGTG
CGGCGGAGGCTCGGAAGAGGGGGGGGGCGGTGGGGGACATCGC
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