EY728288

Overview
NameEY728288
Unique NameEY728288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728288_ssr47 microsatellite EY728288_ssr47:47..56. BLAST: Citrus ESTs to Prunus persica proteins V1
EY728288_ssr57 microsatellite EY728288_ssr57:57..80. BLAST: Citrus ESTs to Prunus persica proteins V1
EY728288_ssr106 microsatellite EY728288_ssr106:106..115. BLAST: Citrus ESTs to Prunus persica proteins V1
EY728288_ssr56 microsatellite EY728288_ssr56:56..79. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11725 contig Csv1_Contig11725:1..916. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_KLULA (Sterol 24-C-methyltransferase OS=Kluyveromyces lactis GN=ERG6 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.861e-38
Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  273 EVEDNYKEYWKFFKRPKETTKEKVPDFVDT---FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFEDTT 707
            E    Y ++W   K   +  + ++ D+ ++   +YN+VTD YE+GWG SFHFS    G+S   +   HE        +K  D ILDVGCGVGGP R I+  +  N++G+  N+YQ+ +A  + K+  LDS    V G+F+K  F++ T
Sbjct:   41 EAVAKYLKHWDG-KTDADAERRRLEDYNESTHSYYNVVTDFYEYGWGSSFHFSRFFKGESFSASVARHEHYLAYKAGIKENDLILDVGCGVGGPARTISRFTGCNIIGLNNNDYQIQKANYYAKRDHLDSKLSFVKGDFMKMEFDENT 187          

HSP 2 Score: 68.9366 bits (167), Expect = 2.861e-38
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAENKD 856
            FD  Y+IEATCHAP  E VY E+++VLKPG  +  YEWV T++Y+  N +
Sbjct:  188 FDSVYAIEATCHAPTFEGVYGEIYKVLKPGGTFAVYEWVMTDKYDETNPE 237          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_SCHPO (Sterol 24-C-methyltransferase OS=Schizosaccharomyces pombe GN=SPBC16E9.05 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.398e-37
Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  228 GKRAVNLSG-GSISAEEVEDNYK---EYWKFFKRPKETTKEK--------VPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFEDTT 707
            GK A   +G  +I++++V++  +   EY++F+ R  E   E+            V+++Y+L TD+YE+GW QSFHFS    G++   +   HE      + +K G R+LDVGCGVGGP R I   +  N+VG+  N+YQ++R   +  K  LD     V G+F+   FED T
Sbjct:   21 GKAAEKKTGLAAIASKDVDEQSRKLQEYFEFWDRNHENESEEDRARRIDGYKSVVNSYYDLATDLYEYGWSQSFHFSRFYKGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRCNNYAVKRNLDKKQVFVKGDFMHMPFEDNT 192          

HSP 2 Score: 64.3142 bits (155), Expect = 1.398e-37
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEA 844
            FD  Y+IEAT HAP LE VY E+FRVLKPG ++  YEWV ++ Y++
Sbjct:  193 FDYVYAIEATVHAPSLEGVYGEIFRVLKPGGVFGVYEWVMSDDYDS 238          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_YARLI (Sterol 24-C-methyltransferase OS=Yarrowia lipolytica GN=ERG6 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.822e-37
Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 3
Query:  363 FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFEDTTSTA 716
            +YNLVTD YE+GWG SFHFS    G++ R AT  HE      + ++ G ++LDVGCGVGGP R IA  + AN+VG+  N+YQV R   +++  G       V G+F++  F D +  A
Sbjct:   82 YYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHYLAYKMGIQPGMKVLDVGCGVGGPAREIARFTGANIVGLNNNDYQVERGTHYSEVQGFGDQVTYVKGDFMQMDFPDNSFDA 199          

HSP 2 Score: 69.3218 bits (168), Expect = 1.822e-37
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAENKD 856
            FD  Y+IEAT HAP LE VY+E+FRVLKPG ++  YEWV T++Y+  N +
Sbjct:  197 FDAVYAIEATVHAPVLEGVYSEIFRVLKPGGVFGVYEWVMTDEYDESNPE 246          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_CLAL4 (Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC 42720) GN=ERG6 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.822e-37
Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 3
Query:  321 KETTKEKVPDF---VDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFE 698
            ++  K+++ D+      +YNLVTD YE+GWG SFHFS    G++ R AT  HE      +++    R+LDVGCGVGGP R I   +   +VG+  N+YQV RA+ + KK  LD     V G+F++  FE
Sbjct:   59 EDDEKKRLDDYSSLTKNYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHFLAHKMNINENMRVLDVGCGVGGPGREICRFTDCTIVGLNNNDYQVERAQYYAKKYKLDDKLSYVKGDFMQMDFE 187          

HSP 2 Score: 67.3958 bits (163), Expect = 1.822e-37
Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAENKD 856
            FD  Y+IEAT HAP LE VY+E+++VLKPG ++  YEWV T++Y+  N++
Sbjct:  191 FDAVYAIEATVHAPVLEGVYSEIYKVLKPGGVFGVYEWVMTDKYDENNEE 240          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_ASHGO (Sterol 24-C-methyltransferase OS=Ashbya gossypii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.028e-37
Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  270 EEVEDNYKEYWKFFKRPKETTKEKVPDFVDT---FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFEDTT 707
            +E    Y  +W       E  + ++ D+ ++   +YN+VTD YE+GWG SFHFS    G+S   +   HE        + +GD +LDVGCGVGGP R IA  +   VVG+  N+YQ+ + + +++K GL      V G+F+   F D T
Sbjct:   41 QEAVAKYLRHWDG-ATDAEAEERRLADYNESTHSYYNVVTDFYEYGWGASFHFSRFYTGESFAMSMARHEHYLAHRAGITSGDLVLDVGCGVGGPAREIARFTGCRVVGLNNNDYQIMKGKHYSRKLGLGDQVSYVKGDFMNMDFPDAT 188          

HSP 2 Score: 71.2478 bits (173), Expect = 4.028e-37
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAENKD 856
            FD  Y+IEATCHAP  E VY E++RVLKPG ++  YEWV TE Y+  N +
Sbjct:  189 FDKVYAIEATCHAPSFEGVYGEIYRVLKPGGVFAVYEWVMTENYDETNPE 238          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_NEUCR (Sterol 24-C-methyltransferase OS=Neurospora crassa GN=B24P7.240 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.160e-36
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  294 EYWKFF---------KRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFEDTTSTA 716
            EY+K F         +  +E   ++       +YNL TDIYE+GWGQ FHF    PG+S   A   HE      I +K   ++LDVGCGVGGP R IA  + A++ G+  N+YQ++RA  +  + GL    + V G+F++ +F D +  A
Sbjct:   50 EYFKHFDNKTAEAETQADREARTKEYATLTRHYYNLATDIYEYGWGQCFHFCRYSPGESFYQAIARHEHYLAAQIGIKKDMKVLDVGCGVGGPAREIAKFTDAHITGLNNNDYQIDRATHYAVRDGLSGQLKFVKGDFMQMSFPDNSFDA 199          

HSP 2 Score: 67.781 bits (164), Expect = 1.160e-36
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAEN 850
            FD  Y+IEAT HAPKLE VY E++RVLKPG  +  YEW+ T+ Y+ +N
Sbjct:  197 FDAVYAIEATVHAPKLEGVYGEIYRVLKPGGTFGVYEWLMTDNYDNDN 244          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_CANAL (Sterol 24-C-methyltransferase OS=Candida albicans GN=ERG6 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.968e-36
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 3
Query:  264 SAEEVEDNYKEYWK--FFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFE 698
            +A    + Y ++W     K  +E            +YNLVTD YE+GWG SFHFS    G++ R AT  HE      +++    ++LDVGCGVGGP R I   +   +VG+  N+YQ+ RA  + KK  LD     V G+F++  FE
Sbjct:   41 AASVAAEGYFKHWDGGISKDDEEKRLNDYSQLTHHYYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHFLAHKMNLNENMKVLDVGCGVGGPGREITRFTDCEIVGLNNNDYQIERANHYAKKYHLDHKLSYVKGDFMQMDFE 187          

HSP 2 Score: 67.3958 bits (163), Expect = 1.968e-36
Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAENKD 856
            FD  Y+IEAT HAP LE VY+E+++VLKPG ++  YEWV T++Y+  N++
Sbjct:  191 FDAVYAIEATVHAPVLEGVYSEIYKVLKPGGIFGVYEWVMTDKYDETNEE 240          
BLAST of EY728288 vs. ExPASy Swiss-Prot
Match: ERG6_PNECA (Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.696e-35
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 3
Query:  363 FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKXAFEDTT 707
            +YNLVTD YE+GW  SFHF      +S   A   HE        ++ G+ +LDVGCGVGGP   I+  + AN+VG+  N+YQ+ RA+ +++K GL    + + G+F++  F + +
Sbjct:   80 YYNLVTDFYEYGWSTSFHFCRFAKDESFSQAIARHEHYIALHAGIREGETVLDVGCGVGGPACQISVFTGANIVGLNNNDYQIQRAKYYSEKKGLSDKLKFIKGDFMQMPFPENS 194          

HSP 2 Score: 69.707 bits (169), Expect = 4.696e-35
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 2
Query:  707 FDGAYSIEATCHAPKLEDVYAEVFRVLKPGSLYVSYEWVTTEQYEAENKD 856
            FD  YSIEAT HAP LE VY+E++RVLKPG LY SYEWV   +Y+  + +
Sbjct:  195 FDKIYSIEATIHAPSLEGVYSEIYRVLKPGGLYASYEWVMLNKYDENDPE 244          
The following BLAST results are available for this feature:
BLAST of EY728288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ERG6_KLULA2.861e-3837.16Sterol 24-C-methyltransferase OS=Kluyveromyces lac... [more]
ERG6_SCHPO1.398e-3736.05Sterol 24-C-methyltransferase OS=Schizosaccharomyc... [more]
ERG6_YARLI1.822e-3744.07Sterol 24-C-methyltransferase OS=Yarrowia lipolyti... [more]
ERG6_CLAL41.822e-3741.86Sterol 24-C-methyltransferase OS=Clavispora lusita... [more]
ERG6_ASHGO4.028e-3736.24Sterol 24-C-methyltransferase OS=Ashbya gossypii G... [more]
ERG6_NEUCR1.160e-3637.33Sterol 24-C-methyltransferase OS=Neurospora crassa... [more]
ERG6_CANAL1.968e-3637.41Sterol 24-C-methyltransferase OS=Candida albicans ... [more]
ERG6_PNECA4.696e-3539.13Sterol 24-C-methyltransferase OS=Pneumocystis cari... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728288 ID=EY728288; Name=EY728288; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCGGACGCGTGGGCGCCCGAGTCCGCCTTTGCTTTTTCTC
TCTCTCACACACACACACACACACACACACAACACAGTCACGCTCTCGCA
CTCCATCTCTCTCTCCTTCTAACTTTTTCAAGTCTCAATGGATTCTCTCG
CTCTCTTTTGCACCGGCGCTCTCCTTGCCGGTGGCCTCTACTGGTTTGTC
TGCGTACTCGGCCCCGCCGAACAAAAGGGCAAGCGCGCCGTCAACCTCTC
CGGCGGCTCGATCTCCGCCGAGGAAGTCGAAGACAATTATAAAGAGTACT
GGAAGTTCTTTAAACGCCCGAAGGAGACAACCAAGGAGAAGGTTCCAGAT
TTCGTCGACACGTTTTACAACTTAGTCACAGACATTTACGAGTGGGGGTG
GGGCCAGTCCTTCCACTTCTCCCCCTCTATCCCCGGGAAATCCCACCGTG
ACGCCACGCGCCTCCACGAGGAGATGGCCGTCGATCTCATTGACGTCAAG
GCCGGAGACCGCATTCTCGACGTCGGATGCGGGGTCGGCGGTCCCATGCG
TGCCATCGCCGCCCACTCGCGTGCCAATGTCGTCGGCATCACAATCAACG
AGTATCAAGTGAATCGTGCTCGTCTGCACAACAAGAAGGCGGGATTAGAT
TCTCTCTGCGAAGTAGTATGCGGAAACTTCCTAAAGATNGCGTTTGAAGA
CACCACTTCGACGGCGCGTACTCAATCGAAGCGACATGTCACGCGCCGAA
GCTGGAAGACGTGTACGCTGAGGTCTTTAGGGTTTTGAAGCCCGGATCTC
TATACGTGTCGTACGAGTGGGTCACGACAGAACAGTACGAAGCGGAAAAC
AAAGACACGTGGACATCATTCAGGGTATCAAACGTGGNAGATGCGTGCCT
GGGCTGAGAGCTAC
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