EY728239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYA +AVK G SIGVR D V + K++ L++ +SV + ++G+ + G +ADAR L+ AR +A + +YG + V+ L K Sbjct: 21 GRLYQVEYAREAVKR-GTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTK 116
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 35/97 (36.08%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQVEYA +A+K G T+IG+ + V + +K++ L+ ++V + + K++G +G++ADARTL+++AR E F Y M ++ A+ Sbjct: 19 GRLFQVEYAIEAIKL-GSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQ 114
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYA +A+ AG ++IG+ KD V ++ +KKV KLL TS ++ I ++ G+++DA L+ AR +A + F Y MPV+ L + Sbjct: 16 GRLYQVEYAMEAIGNAG-SAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQ 112
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYA +A+ AG ++IG+ KD V +V +KKV KLL TS ++ I ++ G+++DA L+ AR +A + F Y MPV+ L + Sbjct: 16 GRLYQVEYAMEAIGNAG-SAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQ 112
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPV 288 GR+FQ++YA KAV+ +G T IG+RGKD+V + +K + KL + + +F I K +G+ G++AD + AR EAA +R ++ +P+ Sbjct: 19 GRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPL 109
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYA +A+ AG ++IG+ KD V ++ +KKV KLL TS ++ I ++ G+++DA L+ AR +A + F Y MPV+ L + Sbjct: 16 GRLYQVEYAMEAIGNAG-SAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQ 112
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLA 300 GRLFQ EYA+KAV+ A T IG++ +D V + +K V KLL + + +++G+ TG I D + +V++AR EA +R YG +P V+A Sbjct: 18 GRLFQAEYAYKAVENAS-TCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIA 112
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11 Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRL+QVEYA +AVK G SIGVR + V + K+ L++ TSV + ++G+ + G +ADAR L+ AR+++ R +YG + ++ L K Sbjct: 21 GRLYQVEYAREAVKR-GTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTK 116
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 36/97 (37.11%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQVEYA +AVK G T++G++ + V +++ KK+ KL++ S+ + I Y+ + +G++ADAR L+ AR A + + YG + ++ L K Sbjct: 19 GRLFQVEYAREAVKK-GSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVK 114
BLAST of EY728239 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 37/97 (38.14%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAK 303 GRLFQVEYA +AVK G T++G++ + V +++ KKV +L++ S+ + I Y+ + +G++ADAR LV AR A + + YG + ++ L K Sbjct: 19 GRLFQVEYAREAVKK-GSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVK 114 The following BLAST results are available for this feature:
BLAST of EY728239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728239 ID=EY728239; Name=EY728239; organism=Citrus sinensis; type=EST; length=927bpback to top |