EY728231

Overview
NameEY728231
Unique NameEY728231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24
Identity = 71/199 (35.68%), Postives = 106/199 (53.27%), Query Frame = 1
Query:  232 QFPLFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGG--NDXDELXXHTSXISGTYGYMSPEYALEG 822
            Q+  F++  + +AT +FS   K+G G +G VYK  +      VK L     Q  K+ + E  ++++++H +LV LLG C E+    L+YEYM N SL+  LF       L W  R +I   VA  L++LH+     IIHRDLK +NILLD +   K+ D G++ +V     +    +   TS + GT  Y+ PEY   G
Sbjct:  464 QYQHFAWEEIMAATSSFSEELKIGMGAYGAVYKCNLHHTTAVVKVLQSAENQLSKQFQQELEILSKIRHPHLVLLLGACPEQGA--LVYEYMENGSLEDRLFQVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPV-GTLCYIDPEYQRTG 659          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.565e-24
Identity = 64/177 (36.16%), Postives = 107/177 (60.45%), Query Frame = 1
Query:  283 SAANKLGEGGFGTVYKGVIGQG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCI-EKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPE 807
            + A  +G+  +GTVYK  +  G ++AVKRL  K  +  KE +NE +V+ +++H NL+ L    +  K E+L++++YM   SL  FL        ++W TR+ +IKG+A+GL YLH ++   IIH +L +SN+LLD+++  KISD+G++R++        +       +G  GY +PE
Sbjct:  489 ATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKSQKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHARGPDVHINWPTRMSLIKGMARGLFYLHTHA--NIIHGNLTSSNVLLDENITAKISDYGLSRLMTAAAGSSVI-----ATAGALGYRAPE 658          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.595e-24
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 1
Query:  244 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQG-EIAVKR----LLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL-FDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 720
            FS + + +    FS    LGEG  G VYK     G + AVK     LLGK   E  E  +  S I+ + HKN+ +L+G C E+   +L+YEY  + SL  FL       + L W TR++I  G A+ + YLH+     ++H+++K+SNILLD ++NP++SD+G+A
Sbjct:  403 FSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLGKGNPE--EFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLA 565          

HSP 2 Score: 21.9422 bits (45), Expect = 1.595e-24
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  824 FFDKSDVFSFGVCCL 868
            +  KSDV+SFGV  L
Sbjct:  590 YTQKSDVYSFGVVML 604          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.669e-24
Identity = 68/200 (34.00%), Postives = 106/200 (53.00%), Query Frame = 1
Query:  232 QFPLFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXD---ELXXHTSXISGTYGYMSPEYALEG 822
            Q+  F++  + +AT +FS   K+G G +G VYK  +     AVK L        K+   E  ++++++H +LV LLG C   D   L+YEYM N SL+  LF     + + W  R++I   VA  L++LH+     IIHRDLK +NILL+ +   K+ D G++ ++   +       +   TS + GT  Y+ PEY   G
Sbjct:  444 QYQEFTWEEIINATSSFSEDLKIGMGAYGDVYKCNLHHTIAAVKVLHSAESSLSKQFDQELEILSKIRHPHLVLLLGAC--PDHGALVYEYMENGSLEDRLFQVNDSQPIPWFVRLRIAWEVASALVFLHKSKPTPIIHRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPV-GTLCYIDPEYQRTG 640          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.556e-24
Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 1
Query:  244 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKD-ERLLIYEYMPNKSLDCFLFDPT---KREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEY 810
            F    + SATG F   N LG G  G+VYK VIG   IAVKR   KS +  +E  NE  ++++++    V LLG   +   E LL+ E+M N SL   +   T      I  W  R++I   +A+ +  LH      IIHRD+K++N+L+DK++N K+ DFG+A       + D+    ++  +GT GY+ P+Y
Sbjct:   47 FLHRDLESATGGFDINNLLGRGSHGSVYKAVIGSRHIAVKR-PSKSREISREFHNEFEILSRIRSPRFVNLLGFSADNSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHS-QETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRC----NVDDQKVKSTPPAGTMGYLDPDY 233          

HSP 2 Score: 21.1718 bits (43), Expect = 3.556e-24
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  833 KSDVFSFGVCCL 868
            K+DVFSFG+  L
Sbjct:  242 KTDVFSFGILLL 253          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.552e-24
Identity = 63/163 (38.65%), Postives = 98/163 (60.12%), Query Frame = 1
Query:  244 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSL-DCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIV 729
            +SF  ++ AT  F  + KLGEG +G+VYKG +   ++AVK L         E +    ++++V+H NLV L+G C E   R LIY+Y+PN SL DCF  +      L W +R++I   +   LL+LH  +   IIH +LK S ILLD ++  KI+D+G+++++
Sbjct:  448 YSFMEINEATNEFDPSWKLGEGKYGSVYKGNLQHLQVAVKMLPSYGSLNHFEFERRVEILSRVRHPNLVTLMGACPE--SRSLIYQYIPNGSLEDCFSSE-NNVPALSWESRIRIASEICSALLFLHS-NIPCIIHGNLKPSKILLDSNLVTKINDYGISQLI 606          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.765e-24
Identity = 69/189 (36.51%), Postives = 106/189 (56.08%), Query Frame = 1
Query:  244 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGE-IAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPE 807
            + ++ +   T +FS  + +G+GGFGTVY+G +  G  +AVK L    G    +  NE + ++Q  H N+V LLG C E  +R +I E++ + SLD F+    K    +  T   I  G+A+GL YLH   + RI+H D+K  NILLD +  PK++DFG+A++     +  E         GT GY++PE
Sbjct:  486 YIYAELKKITKSFS--HTVGKGGFGTVYRGNLSNGRTVAVKVLKDLKGNG-DDFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFI-SRNKSLTPNVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLC----EKRESILSLIDTRGTIGYIAPE 666          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23
Identity = 67/197 (34.01%), Postives = 103/197 (52.28%), Query Frame = 1
Query:  244 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSG---QEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL-FDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALEG 822
            ++ S +  AT +FS  N LGEG FG VY+     G++   + +  S        +     S IA + H+N+ KL G C E  + L++YE+  N SL  FL     + + L W  RV+I  G A+ L YLH+     I+H+++K++NILLD ++NP +SD G+A  +   N   EL           GY +PE ++ G
Sbjct:  407 YTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTAN---ELLNQNDE-----GYSAPETSMSG 595          

HSP 2 Score: 21.557 bits (44), Expect = 1.311e-23
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  833 KSDVFSFGVCCL 868
            KSDV+SFGV  L
Sbjct:  600 KSDVYSFGVVML 611          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.324e-23
Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 1
Query:  232 QFPLFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALEGI 825
            Q+  +++  +++AT +F+   K+G G +G+VYK  +     AVK L     Q  K+   E  ++++++H +LV LLG C E+    L+YEYM N SLD  L        + W  R +I   VA  L++LH+     IIHRDLK  NILLD +   K+ D G++ +V   +         +   GT  Y+ PEY   GI
Sbjct:  474 QYQHYTWEEIAAATSDFAENLKIGIGAYGSVYKCNLHHTTGAVKVLHAGETQLSKQFDQELEILSKIRHPHLVLLLGACPERG--CLVYEYMDNGSLDDRLMLVNDTPPIPWFERFRIALEVASALVFLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGI 669          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.730e-23
Identity = 67/204 (32.84%), Postives = 106/204 (51.96%), Query Frame = 1
Query:  232 QFPLFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLF------DPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALEGI 825
            Q+  F +  +  AT +FS   K+G GG+G+VY+  +    +AVK L        K+   E  ++++++H +L+ LLG C E+    L+YEYM N SL+  L       D  +   L W  R +I   +A  L +LH      I+HRDLK +NILLD++   KI D G++++V           + +   GT+ Y+ PEY   G+
Sbjct:  413 QYMKFEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHHTTVAVKVLHSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGS--LVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGV 614          
The following BLAST results are available for this feature:
BLAST of EY728231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PUB35_ARATH1.565e-2435.68U-box domain-containing protein 35 OS=Arabidopsis ... [more]
IMK3_ARATH1.565e-2436.16Probable leucine-rich repeat receptor-like protein... [more]
SRF4_ARATH1.595e-2438.18Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
PUB53_ARATH2.669e-2434.00Putative U-box domain-containing protein 53 OS=Ara... [more]
CCR35_ARATH3.556e-2436.27Serine/threonine-protein kinase-like protein At3g5... [more]
PUB32_ARATH4.552e-2438.65U-box domain-containing protein 32 OS=Arabidopsis ... [more]
Y5392_ARATH7.765e-2436.51Probable receptor-like protein kinase At5g39020 OS... [more]
SRF7_ARATH1.311e-2334.01Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
PUB52_ARATH1.324e-2334.34U-box domain-containing protein 52 OS=Arabidopsis ... [more]
PUB51_ARATH1.730e-2332.84U-box domain-containing protein 51 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-B09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728231 ID=EY728231; Name=EY728231; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGATCGTTCACCGTAACCACAAATCGAACTATTTTTCTCGC
CCTATCGGCTACTCTAGCTGGAATGGCCGCCTTGGGCTTGACAATTTTTT
GTTTCAGGAGAAATACCACAAACAAAGGGGAGGATTTGATGAAATTTGAT
CTGGGTATGAACCTAAAGGTCGATGTAGAGCTTACAGAAGGCAATAATAA
GTGCAAAAAAGGGTGCGAAAAGGAAGTTGATCAATTTCCCTTGTTCAGTT
TTTCCAGTGTTTCTTCTGCAACTGGTAATTTCTCCGCAGCAAATAAGCTT
GGCGAAGGAGGCTTCGGAACTGTTTACAAGGGAGTAATAGGGCAAGGTGA
GATAGCTGTGAAAAGGCTTTTAGGAAAATCCGGACAGGAGATAAAAGAGT
TAAAAAACGAAGCATCGGTAATAGCCCAGGTTCAACACAAGAATCTTGTT
AAACTTTTGGGTTGCTGCATTGAGAAAGATGAGAGGTTATTGATCTATGA
GTACATGCCAAATAAAAGCTTGGATTGCTTCCTCTTTGATCCAACCAAAC
GAGAAATATTAGATTGGAGAACCCGTGTTCAGATCATTAAAGGAGTAGCT
CAAGGGCTTCTTTATCTTCATCAATATTCCAGAGTCCGAATCATTCACAG
GGATTTGAAAGCTAGCAATATCTTGTTGGATAAAGATATGAATCCTAAAA
TTTCAGATTTTGGAATGGCAAGAATAGTTTTTGGAGGGAATGATGANGAT
GAGTTACNANNGCACACTAGTANGATCTCCGGGACTTATGGATACATGTC
TCCTGAATATGCACTTGAAGGAATTTTTCGATAAATCGGATGTCTTTAGC
TTCGGAGTTTGTTGCTTGAGACGTGAGTGGCAGAAGACACTGGATTTATC
GAACA
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