EY728231

Overview
NameEY728231
Unique NameEY728231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: MERTK_HUMAN (Proto-oncogene tyrosine-protein kinase Mer OS=Homo sapiens GN=MERTK PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 1
Query:  298 LGEGGFGTVYKGVIGQGE-----IAVK--RLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDER-----LLIYEYMPNKSLDCFLFDP---TKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGN 741
            LGEG FG+V +G + Q +     +AVK  +L   S +EI+E  +EA+ +    H N+++LLG CIE   +     ++I  +M    L  +L      T  + +  +T ++ +  +A G+ YL   S    +HRDL A N +L  DM   ++DFG+++ ++ G+
Sbjct:  593 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 752          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: IRAK2_HUMAN (Interleukin-1 receptor-associated kinase-like 2 OS=Homo sapiens GN=IRAK2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = 1
Query:  244 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGQGEIAVKRL----LGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKIS 705
            +S + V  AT +F+   K+ +G F  VY+G         K+L        G   +  + E  +  +  H N++ +LG C  +     IY YM N SL   L      + L W  RV I  G+   + YLH    + IIH ++K+SN+LLD+++ PK++
Sbjct:  198 WSEADVVQATDDFNQNRKISQGTFADVYRGHRHGKPFVFKKLRETACSSPGSIERFFQAELQICLRCCHPNVLPVLGFCAARQFHSFIYPYMANGSLQDRLQGQGGSDPLPWPQRVSICSGLLCAVEYLH---GLEIIHSNVKSSNVLLDQNLTPKLA 352          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: ERBB2_HUMAN (Receptor tyrosine-protein kinase erbB-2 OS=Homo sapiens GN=ERBB2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  298 LGEGGFGTVYKGV-IGQGE-----IAVKRLLGKSGQEI-KELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKR----EILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHTSXISGTYGYMSPEYALEGIFR 831
            LG G FGTVYKG+ I  GE     +A+K L   +  +  KE+ +EA V+A V    + +LLG C+    +L + + MP   L   + +   R    ++L+W  ++      A+G+ YL     VR++HRDL A N+L+    + KI+DFG+AR++    D DE   H         +M    ALE I R
Sbjct:  726 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLL----DIDETEYHADGGKVPIKWM----ALESILR 896          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: EPHA7_MOUSE (Ephrin type-A receptor 7 OS=Mus musculus GN=Epha7 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 51/153 (33.33%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  298 LGEGGFGTVYKGVI---GQGEIAVKRLLGKSGQEIKELKN---EASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQII---KGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIV 729
            +G G FG V  G +   GQ ++AV     K G   K+ ++   EAS++ Q  H N+V L G        +++ E+M N +LD FL     R+     T +Q++   +G+A G+ YL   + +  +HRDL A NIL++ ++  K+SDFG++R++
Sbjct:  639 IGAGEFGEVCSGRLKLPGQRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL-----RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 783          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: EPHA7_CHICK (Ephrin type-A receptor 7 OS=Gallus gallus GN=EPHA7 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 51/153 (33.33%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  298 LGEGGFGTVYKGVI---GQGEIAVKRLLGKSGQEIKELKN---EASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFDPTKREILDWRTRVQII---KGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIV 729
            +G G FG V  G +   G+ ++AV     K G   K+ ++   EAS++ Q  H N+V L G        +++ EYM N +LD FL     R+     T +Q++   +G+A G+ YL   + +  +HRDL A NIL++ ++  K+SDFG++R++
Sbjct:  634 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEYMENGALDAFL-----RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 778          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 51/172 (29.65%), Postives = 91/172 (52.91%), Query Frame = 1
Query:  238 PLFSFSSVSSATGNFSAANKLGEGGFGTVYKGV--IGQGEIAVKRLL---GKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL-----FDPTKREILDWRTRVQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR 723
            P+++++    A   +   +++GEG +G VYK +  +    +A+KR+     K G  I  ++ E  ++ +++HKN+V+LL   +EK    +++EYM +      L     F P   + L         K + + L YLH      ++HRD+K SNILL+ + + K +DFG+AR
Sbjct:  266 PIYTYTYPKPA---YEKIDQIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVR-EVKILQRLRHKNIVRLLEIMVEKSSVYMVFEYMDHDLTGVLLNSQLHFTPGNIKHLS--------KQIFEALAYLHHRG---VLHRDIKGSNILLNNNGDLKFADFGLAR 422          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: NTRK3_CHICK (NT-3 growth factor receptor OS=Gallus gallus GN=NTRK3 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.921e-12
Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  295 KLGEGGFGTVYKGVI-------GQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL--FDPTKREILDWRTR-----------VQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHT 768
            +LGEG FG V+            +  +AVK L   +    K+ + EA ++  +QH+++VK  G C + D  ++++EYM +  L+ FL    P    ++D + R           + I   +A G++YL   +    +HRDL   N L+  ++  KI DFGM+R V+   D   +  HT
Sbjct:  545 ELGEGAFGKVFLAECYNLSPTNDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHT 718          

HSP 2 Score: 20.7866 bits (42), Expect = 1.921e-12
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  818 KEFFDKSDVFSFGV 859
            ++F  +SDV+SFGV
Sbjct:  733 RKFTTESDVWSFGV 746          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: NTRK3_PANTR (NT-3 growth factor receptor OS=Pan troglodytes GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.921e-12
Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  295 KLGEGGFGTVYKGVI-------GQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL--FDPTKREILDWRTR-----------VQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHT 768
            +LGEG FG V+            +  +AVK L   +    K+ + EA ++  +QH+++VK  G C + D  ++++EYM +  L+ FL    P    ++D + R           + I   +A G++YL   +    +HRDL   N L+  ++  KI DFGM+R V+   D   +  HT
Sbjct:  543 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHT 716          

HSP 2 Score: 20.7866 bits (42), Expect = 1.921e-12
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  818 KEFFDKSDVFSFGV 859
            ++F  +SDV+SFGV
Sbjct:  731 RKFTTESDVWSFGV 744          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: NTRK3_MOUSE (NT-3 growth factor receptor OS=Mus musculus GN=Ntrk3 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.921e-12
Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  295 KLGEGGFGTVYKGVI-------GQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL--FDPTKREILDWRTR-----------VQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHT 768
            +LGEG FG V+            +  +AVK L   +    K+ + EA ++  +QH+++VK  G C + D  ++++EYM +  L+ FL    P    ++D + R           + I   +A G++YL   +    +HRDL   N L+  ++  KI DFGM+R V+   D   +  HT
Sbjct:  543 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHT 716          

HSP 2 Score: 20.7866 bits (42), Expect = 1.921e-12
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  818 KEFFDKSDVFSFGV 859
            ++F  +SDV+SFGV
Sbjct:  731 RKFTTESDVWSFGV 744          
BLAST of EY728231 vs. ExPASy Swiss-Prot
Match: NTRK3_MACFA (NT-3 growth factor receptor OS=Macaca fascicularis GN=NTRK3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.921e-12
Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  295 KLGEGGFGTVYKGVI-------GQGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFL--FDPTKREILDWRTR-----------VQIIKGVAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIVFGGNDXDELXXHT 768
            +LGEG FG V+            +  +AVK L   +    K+ + EA ++  +QH+++VK  G C + D  ++++EYM +  L+ FL    P    ++D + R           + I   +A G++YL   +    +HRDL   N L+  ++  KI DFGM+R V+   D   +  HT
Sbjct:  543 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHT 716          

HSP 2 Score: 20.7866 bits (42), Expect = 1.921e-12
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  818 KEFFDKSDVFSFGV 859
            ++F  +SDV+SFGV
Sbjct:  731 RKFTTESDVWSFGV 744          
The following BLAST results are available for this feature:
BLAST of EY728231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MERTK_HUMAN1.794e-1231.29Proto-oncogene tyrosine-protein kinase Mer OS=Homo... [more]
IRAK2_HUMAN1.794e-1230.38Interleukin-1 receptor-associated kinase-like 2 OS... [more]
ERBB2_HUMAN1.794e-1233.86Receptor tyrosine-protein kinase erbB-2 OS=Homo sa... [more]
EPHA7_MOUSE1.794e-1233.33Ephrin type-A receptor 7 OS=Mus musculus GN=Epha7 ... [more]
EPHA7_CHICK1.794e-1233.33Ephrin type-A receptor 7 OS=Gallus gallus GN=EPHA7... [more]
CTK1_SCHPO1.794e-1229.65CTD kinase subunit alpha OS=Schizosaccharomyces po... [more]
NTRK3_CHICK1.921e-1229.21NT-3 growth factor receptor OS=Gallus gallus GN=NT... [more]
NTRK3_PANTR1.921e-1229.21NT-3 growth factor receptor OS=Pan troglodytes GN=... [more]
NTRK3_MOUSE1.921e-1229.21NT-3 growth factor receptor OS=Mus musculus GN=Ntr... [more]
NTRK3_MACFA1.921e-1229.21NT-3 growth factor receptor OS=Macaca fascicularis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-B09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728231 ID=EY728231; Name=EY728231; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGATCGTTCACCGTAACCACAAATCGAACTATTTTTCTCGC
CCTATCGGCTACTCTAGCTGGAATGGCCGCCTTGGGCTTGACAATTTTTT
GTTTCAGGAGAAATACCACAAACAAAGGGGAGGATTTGATGAAATTTGAT
CTGGGTATGAACCTAAAGGTCGATGTAGAGCTTACAGAAGGCAATAATAA
GTGCAAAAAAGGGTGCGAAAAGGAAGTTGATCAATTTCCCTTGTTCAGTT
TTTCCAGTGTTTCTTCTGCAACTGGTAATTTCTCCGCAGCAAATAAGCTT
GGCGAAGGAGGCTTCGGAACTGTTTACAAGGGAGTAATAGGGCAAGGTGA
GATAGCTGTGAAAAGGCTTTTAGGAAAATCCGGACAGGAGATAAAAGAGT
TAAAAAACGAAGCATCGGTAATAGCCCAGGTTCAACACAAGAATCTTGTT
AAACTTTTGGGTTGCTGCATTGAGAAAGATGAGAGGTTATTGATCTATGA
GTACATGCCAAATAAAAGCTTGGATTGCTTCCTCTTTGATCCAACCAAAC
GAGAAATATTAGATTGGAGAACCCGTGTTCAGATCATTAAAGGAGTAGCT
CAAGGGCTTCTTTATCTTCATCAATATTCCAGAGTCCGAATCATTCACAG
GGATTTGAAAGCTAGCAATATCTTGTTGGATAAAGATATGAATCCTAAAA
TTTCAGATTTTGGAATGGCAAGAATAGTTTTTGGAGGGAATGATGANGAT
GAGTTACNANNGCACACTAGTANGATCTCCGGGACTTATGGATACATGTC
TCCTGAATATGCACTTGAAGGAATTTTTCGATAAATCGGATGTCTTTAGC
TTCGGAGTTTGTTGCTTGAGACGTGAGTGGCAGAAGACACTGGATTTATC
GAACA
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