EY728229

Overview
NameEY728229
Unique NameEY728229
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11716 contig Csv1_Contig11716:1..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728229 vs. ExPASy Swiss-Prot
Match: HESA2_ANAVT (Protein hesA, vegetative OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hesA2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.771e-15
Identity = 53/173 (30.64%), Postives = 79/173 (45.66%), Query Frame = 3
Query:  315 LSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------------------INSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEXQLTVYXLHGGPCYRCLF 764
            L+   + RY R ++LP FG E Q  L  +++LV G GGLG  A LYLA  GVGRL +V    + L++M+R                       IN  V +    + +   N   ++   ++ +D   N   R +++  CV   KP+V  A  G++  LT       PC  CLF
Sbjct:    4 LTSTELERYRRQIILPGFGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGVGRLILVRGGELRLDDMNRQILMSDDWVGKPRVFKAKKRLEDINPDVEVEAIFDYVTPDNVDSLIQSADVALDCAHNFGERDLLNAACVRWRKPMVEAAMDGMDAYLTTIIPGVTPCLSCLF 176          
BLAST of EY728229 vs. ExPASy Swiss-Prot
Match: HESA_PLEBO (Protein hesA OS=Plectonema boryanum GN=hesA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.363e-14
Identity = 51/173 (29.48%), Postives = 77/173 (44.51%), Query Frame = 3
Query:  315 LSPDMIYRYSRHLLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------------------INSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEXQLTVYXLHGGPCYRCLF 764
            L+P  + RY R ++LP F  + Q  L   + LV G GGLG  A LYLA  G+G+L +V    + L++M+R                       IN  V +    + +   N   ++   +I +D   N   R ++++ CV   KP+V  A  G+E  LT        C  CLF
Sbjct:    4 LTPTELERYRRQMMLPGFDEDAQRRLKSFTALVTGVGGLGGTAALYLAVAGIGKLILVRGGELRLDDMNRQVLMTHDTVGQPRVFKAKETLEKINPDVEVEAVFDYITPDNVDHLVRSTDITLDCAHNFAERDLLNEACVRYRKPMVEAAMDGMEAYLTTILPGQTGCLTCLF 176          
BLAST of EY728229 vs. ExPASy Swiss-Prot
Match: HESA_ANASP (Protein hesA OS=Anabaena sp. (strain PCC 7120) GN=hesA PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.719e-14
Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 3
Query:  351 LLLPSFGVEGQSNLLKSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHR-----------------------INSTVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEXQLTVYXLHGGPCYRCLF 764
            ++LP+FG   Q  L  +++LV G GGLG  A LYLA  GVGRL +V    + L++M+R                       IN  + I    + + + N   ++   ++ +D   N   R +++  CV   KP+V  A  G+E  LT       PC  C+F
Sbjct:    1 MMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGRLILVRGGDLRLDDMNRQVLMTDDWVGKPRVFKAKETLQAINPDIQIETIHDYITSENVDSLVQSADMALDCAHNFTERDLLNSACVRWRKPMVEAAMDGMEAYLTTIIPGVTPCLSCIF 161          
The following BLAST results are available for this feature:
BLAST of EY728229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
HESA2_ANAVT1.771e-1530.64Protein hesA, vegetative OS=Anabaena variabilis (s... [more]
HESA_PLEBO4.363e-1429.48Protein hesA OS=Plectonema boryanum GN=hesA PE=3 S... [more]
HESA_ANASP9.719e-1429.81Protein hesA OS=Anabaena sp. (strain PCC 7120) GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-B07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728229 ID=EY728229; Name=EY728229; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGCATTCTTTGAATTTGTCACTTTTCTGTCTAATTAGGGTT
CCTCTGATTGCCGCTTCACCTCTGACCCCACTTCACAGTCTTCACTGGAC
GTCTTCGGTTGTTCAGAATATGGAGACAAACGGAGGTAGCACTGACGTGG
CAAGAGTCCTCGGCGAAATTGAAACCTTAAAGGCTGCTAAGAGTGATATT
GATTATCGAATCTCCGCTCTTGAAGCTCAGCTTCGTGACACGACTGTTAG
TCAGCCCCAAACCGACACCGTTTCTAATGGTTCTTATCGTCCAAGCTCTG
CCGTTGATTATGGACTATCACCGGATATGATTTACCGTTACAGTCGCCAC
CTCTTGCTTCCTTCTTTCGGTGTTGAAGGGCAATCGAATCTCCTCAAGTC
TTCGATTTTAGTGATTGGAGCTGGGGGCTTGGGCTCGCCGGCTCTGCTGT
ATCTTGCAGCTTGTGGTGTTGGGCGATTGGGTATTGTGGATCATGATGTA
GTTGAGCTTAACAACATGCACAGGATCAACTCCACTGTTCACATTATTGA
GCACAGAGAAGCTTTACGCACATCCAATGCTTTGGAAATACTGAGTCAAT
ATGAGATAGTTGTAGATGCAACCGATAATGCTCCAAGCCGTTACATGATC
AGTGATTGTTGTGTGGTGTTGGGAAAGCCTCTGGTATCAGGTGCTGCACT
GGGACTGGAANGGCAGCTCACAGTTTACNATTTACATGGAGGTCCTTGCT
ATCGTTGCCTATTTCAACCCCCACACCACTACAGCATGCAAAGATGCGCT
GATAGTGGAGTCCTTGGAGTAGTAGTCCCTGGATCATTGGCTGTCTCCAG
CCTTTAGAGCATTAAGGTGCAAGTGCTGTTGGNGACCACTGCCAGGCGGA
TGCTCCTGTTTATGCATGC
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