EY728218

Overview
NameEY728218
Unique NameEY728218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:42..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 8.170e-44
Identity = 93/176 (52.84%), Postives = 110/176 (62.50%), Query Frame = 3
Query:   24 KMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSG-KPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 539
            K+  P+ FFD+ +  QPAGR+V ELF+DV P+T ENFR LCTGEKG GKS  KPLHYK   FHRV+  FM Q            ESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 8.170e-44
Identity = 93/176 (52.84%), Postives = 110/176 (62.50%), Query Frame = 3
Query:   24 KMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSG-KPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 539
            K+  P+ FFD+ +  QPAGR+V ELF+DV P+T ENFR LCTGEKG GKS  KPLHYK   FHRV+  FM Q            ESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ IE     +   +KP   V I  CG+L
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.067e-43
Identity = 95/176 (53.98%), Postives = 112/176 (63.64%), Query Frame = 3
Query:   27 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 539
            M  PK +FD+++GG P GRIV EL+ DV P+TAENF  LC G+ G+ KS    PL YKGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V+EG  +V+ IEK  +  G T+KP   V +  CG L
Sbjct:    1 MTRPKAYFDISIGGTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDG-TDKPMHDVKVEGCGLL 175          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.067e-43
Identity = 94/175 (53.71%), Postives = 110/175 (62.86%), Query Frame = 3
Query:   21 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK--PVVIADCGQL 539
            +K  +  V+FD+    +  GRIVM+L  D+ P+TA+NFR LC   KG G       YKGS+FHR+IPGFM Q             SIYG KF DENF  KHT  GILSMAN G  TNGSQFF+   KT+WLD KHVVFG+VVEGMDVV  I K GS SG+  K   + I DCG L
Sbjct:    2 AKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVL 169          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.820e-43
Identity = 89/172 (51.74%), Postives = 111/172 (64.53%), Query Frame = 3
Query:   27 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 542
            M N   +FD+T+  +PAGR+  ELF DV P+TA NF+ LC G+K   ++G  L Y GSSFHR I GFM Q            ESIYG KF DENF  KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKHVVFG+V+    +V+ IE + ++S R ++ V I+  G LS
Sbjct:    1 MSNTIAYFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAGVLS 171          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.820e-43
Identity = 93/168 (55.36%), Postives = 109/168 (64.88%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQL 539
            KV+FD+   GQP GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+KF DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVFG+V+EG D+V  I+ V      R  K V I  CG+L
Sbjct:   36 KVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKIVKCGEL 196          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.820e-43
Identity = 94/175 (53.71%), Postives = 111/175 (63.43%), Query Frame = 3
Query:   21 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGK-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 539
            SK    +VF D+T+ G  AGRIVMEL+ D+ PRT  NF  LCTG  G GK SGKPLHYKGS+FHRVI  FM Q            ESIYG  F DE FV KH  P ++SMAN GP TNGSQFF+ T     L+  HVVFG+VV G +VV  IE + ++S  R    VVI +CG+L
Sbjct:    2 SKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGEL 176          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43
Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 3
Query:   12 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 476
            +  S   NP VFFD+++GGQ  GR+ +ELFADV P+TAENFR  CTGE    K G P+ YKGS+FHRVI  FM Q             SIY   FADENF  +H+ PG+LSMAN+GP TNG QFF+  +K +WLDGKHVVFG++++G+ V++ IE
Sbjct:    3 VANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43
Identity = 93/176 (52.84%), Postives = 109/176 (61.93%), Query Frame = 3
Query:   27 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 539
            M  PK FFD+++GG+P GRIV EL+ D+ P+TAENF  LC G  G+ K+    PL YKGS FHRVI  FMCQ            ESIY  KF DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVFG+V++G  +V+ IE         NKP   V I DCG L
Sbjct:    1 MTRPKTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIEN-QQCDQENNKPLRDVKIDDCGVL 175          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 2.377e-43
Identity = 88/168 (52.38%), Postives = 107/168 (63.69%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSS-GRTNKPVVIADCGQL 539
            KV+FD  +G +P GR+   LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVFG+V+EGMDVV+ +E   + S  +  K V+I DCG++
Sbjct:   45 KVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGKI 205          
The following BLAST results are available for this feature:
BLAST of EY728218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIG_MOUSE8.170e-4452.84Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN8.170e-4452.84Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPID_CANGA1.067e-4353.98Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
CYPH_ENCCU1.067e-4353.71Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPID_CRYNE1.820e-4351.74Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIB_ARTBE1.820e-4355.36Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
CYP1_BRUMA1.820e-4353.71Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPIH_MOUSE2.377e-4354.19Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPID_YEAST2.377e-4352.84Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIB_RAT2.377e-4352.38Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728218 ID=EY728218; Name=EY728218; organism=Citrus sinensis; type=EST; length=559bp
CCACGCGTCCGATCAACCAATCAAAAATGCCAAACCCCAAAGTGTTCTTC
GACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTGATGGAGCTCTT
CGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCG
GCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAAAGGCTCG
TCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCAC
CGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCGAAATTCGCCG
ATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCG
AATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAA
GACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAG
GGATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGCAGG
ACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTG
ATCATGATA
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