EY728218

Overview
NameEY728218
Unique NameEY728218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.083e-39
Identity = 86/172 (50.00%), Postives = 108/172 (62.79%), Query Frame = 3
Query:   33 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVV---IADCGQL 539
            N + FFD+++ G+PAGRIV  L+    PRT ENFRA CTGE G   +G    Y+GS FHRVI GFM Q             SIYG  F DEN   KH  P +LSMAN GP TNGSQFF+ + +   LDGKH VFG+V++G++VVKAIE +   +G  +KPV    I  CG++
Sbjct:    8 NKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGK-MNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENL--ETGNEDKPVCKVEITHCGEM 176          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 7.914e-39
Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = 3
Query:   36 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIADCGQLS 542
            P+  FD+ +  +P GRI+ +LF+D+ P+T +NF  LC+GEKG+GK+ GK L YKGS+FHRV+  FM Q            ESIYG  F DENF+ KH    +LSMAN G  TNGSQFF+ T     LDG HVVFG V+ G +V++ IE + + ++ R    V + DCG L+
Sbjct:    7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 7.914e-39
Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = 3
Query:   36 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGS-SSGRTNKPVVIADCGQLS 542
            P+  FD+ +  +P GRI+ +LF+D+ P+T +NF  LC+GEKG+GK+ GK L YKGS+FHRV+  FM Q            ESIYG  F DENF+ KH    +LSMAN G  TNGSQFF+ T     LDG HVVFG V+ G +V++ IE + + ++ R    V + DCG L+
Sbjct:    7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.763e-38
Identity = 83/146 (56.85%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 476
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIE 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.007e-38
Identity = 83/146 (56.85%), Postives = 95/146 (65.07%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 476
            KVFFD+ +G +  GRIV+ LF +V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.928e-38
Identity = 83/146 (56.85%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE 476
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVFG+V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.342e-37
Identity = 80/163 (49.08%), Postives = 101/163 (61.96%), Query Frame = 3
Query:   45 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 533
            +F +++ G+    I  ELF +V P+T +NF +LC G +   K G+ L YKGS FHRVI  FM Q            ESIYG KF DENF  KH  P +LSMANAGP TNGSQFF+ T  T  LDGKHVVFG+V++G   V+ IE + + +     PVVI +CG
Sbjct:    6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.650e-36
Identity = 80/159 (50.31%), Postives = 100/159 (62.89%), Query Frame = 3
Query:   72 PAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 539
            PAGR+  ELF+D+ PRT+ENFR LCTGE     +  P  YK S FHR+I  FMCQ             SIYG KF DENF  KH   G+LSMAN+GPGTNG QFF+      +LDGKHVVFG+VV+G+  ++ +E V   +G  N+P   V I  CG++
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENV--PTGANNRPKMAVRITQCGEM 156          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.155e-36
Identity = 84/168 (50.00%), Postives = 103/168 (61.31%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV-EGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 539
            K F D+ + G+ AGRIV+EL  DV P+T +NF         +G   K   YKGS+FHRVI  FM Q             SIYG +F DENF  KH   G++SMANAGP TNGSQFF+ T KTEWLDG+HVVFG++  +    V+AIE +GSS GR +K   I D G L
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIGLL 178          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 4.494e-34
Identity = 72/149 (48.32%), Postives = 94/149 (63.09%), Query Frame = 3
Query:   39 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKP-LHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 482
            +VF DM +  +P GRI ++LF    P+T ENFRALCTGE G+  + K  LHYKG+  HRV+  FM Q             SIYG  F DE FV KH+ P +LSMAN GP +N SQFF+ TA     +GKHVVFG+V++G +VV  ++ +
Sbjct:    7 RVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNL 155          
The following BLAST results are available for this feature:
BLAST of EY728218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYP8_CAEEL2.083e-3950.00Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
NKTR_MOUSE7.914e-3947.37NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN7.914e-3947.37NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPIC_HUMAN1.763e-3856.85Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIC_MOUSE3.007e-3856.85Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIC_BOVIN3.928e-3856.85Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPID_SCHPO4.342e-3749.0840 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIH_USTMA1.650e-3650.31Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPIA_NEOCA2.155e-3650.00Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
CYP9_CAEBR4.494e-3448.32Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728218 ID=EY728218; Name=EY728218; organism=Citrus sinensis; type=EST; length=559bp
CCACGCGTCCGATCAACCAATCAAAAATGCCAAACCCCAAAGTGTTCTTC
GACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTGATGGAGCTCTT
CGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCG
GCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAAAGGCTCG
TCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCAC
CGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCGAAATTCGCCG
ATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCG
AATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAA
GACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAG
GGATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGCAGG
ACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTG
ATCATGATA
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