EY728218

Overview
NameEY728218
Unique NameEY728218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:42..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIA_MYCBO (Probable peptidyl-prolyl cis-trans isomerase A OS=Mycobacterium bovis GN=ppiA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.552e-18
Identity = 65/157 (41.40%), Postives = 82/157 (52.23%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGK---SGKPL--HYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV--EGMDVVKAIEKVGS-SSGRTNKPVVI 521
            G I + LF +  P+T  NF  L  G K       SG P    Y G+ FHRVI GFM Q                G KFADE   + +   P +L+MANAGPGTNGSQFF+   KT  L+ +H +FG+V+  E   VV+AI K  +  + R   PVVI
Sbjct:   24 GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP----GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVI 176          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18
Identity = 56/138 (40.58%), Postives = 74/138 (53.62%), Query Frame = 3
Query:   75 AGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 482
            +G I +EL+ D  P+  ENF ALC  +          +Y G  FHR I  FM Q            ESI+G  F DE FV   KH   G +SMAN GP +N SQFF+  AK   LD K+ +FG+V++G D ++ IE +
Sbjct:    9 SGDIKIELYVDDAPKACENFLALCASD----------YYNGCIFHRNIKDFMVQTGDPTHSGKGG-ESIWGGPFEDE-FVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETI 134          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYP4_CAEEL (Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans GN=cyn-4 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18
Identity = 56/149 (37.58%), Postives = 78/149 (52.35%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVV 518
            G + +ELFA   P+  ENF   C+            +Y  + FHR+I  FM Q            ESI+   F+DE F+    H   G+LSMAN G  TNGSQFF+     ++LD KH +FG++V G D +  IEK+ +  G T+ P+V
Sbjct:  289 GPLNLELFAPKVPKACENFITHCSNG----------YYNNTKFHRLIKNFMLQGGDPTGTGHGG-ESIWDKPFSDE-FISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKLETEEG-TDVPMV 424          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17
Identity = 64/174 (36.78%), Postives = 80/174 (45.98%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 515
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYGS F DE  ++     G LSMANAGP TNGSQFF+   K                            T WLD KH VFGQ++EG   ++ I    +  G  +KPV
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEGESTLEDI--ANTKVGAQDKPV 185          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17
Identity = 64/174 (36.78%), Postives = 80/174 (45.98%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 515
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYGS F DE  ++     G LSMANAGP TNGSQFF+   K                            T WLD KH VFGQ++EG   ++ I    +  G  +KPV
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEGESTLEDI--ANTKVGAQDKPV 185          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17
Identity = 55/128 (42.97%), Postives = 69/128 (53.91%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV 446
            G + +E+F +  P+TAENF ALC        SG   +Y  S FHR+IP FM Q                 SIYG  F DE   V +H   GI+SMAN GP TNGSQFF+   K   LDG + VFG+++
Sbjct:   10 GDLKIEIFCESVPKTAENFLALCA-------SG---YYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLI 127          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17
Identity = 56/137 (40.88%), Postives = 74/137 (54.01%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 482
            G I +E+F D  P  +ENF ALC             +Y  + FHR I GFM Q            ESI+  +F DE F    KH   GILSMAN+GP TNGSQFF+   K   L+  + VFG+++ G++V+  +EKV
Sbjct:   10 GDIKVEIFCDSVPLASENFLALCASN----------YYNNTIFHRNIKGFMIQGGDPTNTGRGG-ESIWKKQFKDE-FPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIAGIEVLDLMEKV 134          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17
Identity = 43/102 (42.16%), Postives = 53/102 (51.96%), Query Frame = 3
Query:   42 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSM 347
            V+ D+ +   P GR++ EL+ D  PRT  NF+ LCTG  G  + G  LHYK S FHRV+     Q            ESIYG  F DENF   H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17
Identity = 64/174 (36.78%), Postives = 79/174 (45.40%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAK----------------------------TEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 515
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  ++     G LSMANAGP TNGSQFFV   K                            T WLD KH VFGQ++EG   ++ I    +  G  +KPV
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQLIEGEATLEDI--ANTKVGAQDKPV 185          
BLAST of EY728218 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.926e-17
Identity = 56/145 (38.62%), Postives = 74/145 (51.03%), Query Frame = 3
Query:   78 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 509
            G I ++L+ +  P+  +NF      E G        +Y  + FHR+I  FM Q            ESI+   F DE     KH  P  +SMAN+GP TNGSQFF+ T  T WLDGKH +F +   G+DVV  IE+     G T+K
Sbjct:  464 GDISIKLYPEEAPKAVQNFTT--HAENG--------YYDNTIFHRIIKNFMIQGGDPLGDGTGG-ESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQ-----GETDK 592          
The following BLAST results are available for this feature:
BLAST of EY728218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIA_MYCBO1.552e-1841.40Probable peptidyl-prolyl cis-trans isomerase A OS=... [more]
CYP10_CAEEL3.457e-1840.58Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]
CYP4_CAEEL5.896e-1837.58Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhab... [more]
PPI1_STAES1.006e-1736.78Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ1.006e-1736.78Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL3_NEUCR1.314e-1742.97Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL3_DICDI1.314e-1740.88Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL6_MOUSE2.926e-1742.16Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
PPI1_STAHJ2.926e-1736.78Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CYP9_SCHPO2.926e-1738.62Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728218 ID=EY728218; Name=EY728218; organism=Citrus sinensis; type=EST; length=559bp
CCACGCGTCCGATCAACCAATCAAAAATGCCAAACCCCAAAGTGTTCTTC
GACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTGATGGAGCTCTT
CGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCG
GCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACTACAAAGGCTCG
TCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCAC
CGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTCGAAATTCGCCG
ATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCG
AATGCCGGACCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAA
GACCGAGTGGCTCGATGGGAAGCACGTTGTGTTCGGTCAGGTCGTCGAAG
GGATGGACGTCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGCAGG
ACCAACAAGCCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTG
ATCATGATA
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