EY728195

Overview
NameEY728195
Unique NameEY728195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PONAB (Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo abelii GN=GAPDH PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 4.599e-33
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   55 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            GKVK+GINGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+T+F  R+P +I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 GKVKVGINGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 6.006e-33
Identity = 71/133 (53.38%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   55 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            GKVK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G  P+T+F  R+P +I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-NPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.844e-33
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            +K+GINGFGRIGR+V R  L+  +VE+VAVNDPFI T+Y  YMFKYDS HG++K  +++ KD   ++ G K + VFG R+P  IPW + GA+YVVESTGVFT               VIISAPS DAPMFV
Sbjct:    3 IKVGINGFGRIGRIVLRNALKNPEVEVVAVNDPFIDTEYAAYMFKYDSTHGRFK-GKVEAKDGGLIIDG-KHIQVFGERDPSNIPWGKAGADYVVESTGVFTGKEAASAHLKGGAKKVIISAPSGDAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.844e-33
Identity = 74/131 (56.49%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK GINGFGRIGR+V R  L   D+++VAVNDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KP+ VF  ++P  IPW   GAEY+VESTGVFT               VIISAPS DAPMFV
Sbjct:    3 VKAGINGFGRIGRIVLRNALLHGDIDVVAVNDPFIDLEYMVYMFKYDSVHGRFK-GSVEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.024e-32
Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            +KIGINGFGRIGRLV RV L R D+E+VAVNDPFI  DY  YMFKYDS HG++K  E+    D  ++ G K + VF  R+P  IPW ++G +YV+ESTGVFT               VII+APS DAPMFV
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKDIEVVAVNDPFIAPDYAAYMFKYDSTHGRYK-GEVTASGDDLVIDGHK-IKVFQERDPANIPWGKSGVDYVIESTGVFTKVEGAQKHIDAGAKKVIITAPSADAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.338e-32
Identity = 74/131 (56.49%), Postives = 86/131 (65.65%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            +K+GINGFGRIGR+V R   Q  +VE+VAVNDPFI  +Y  YM KYDS HGQ+      V+D   L+   + V  +  RNPEEIPWAETGAEY+VESTGVFT               VIISAPS DAPMFV
Sbjct:    4 IKVGINGFGRIGRIVFRNAAQSCEVEVVAVNDPFIEPEYAAYMLKYDSTHGQFNGDIQTVEDG--LVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMFV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.338e-32
Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  LQ  D+E+VAVNDPFI  +YM YMFKYDSVHG++K   ++VK+   ++ G +P+ VF  R+P  IPW   GA+YVVESTGVFT               V+ISAPS DAPM+V
Sbjct:    2 VKVGINGFGRIGRIVLRNALQFQDIEVVAVNDPFIDLEYMAYMFKYDSVHGRFK-GTVEVKNGSFVVDG-RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.748e-32
Identity = 75/135 (55.56%), Postives = 88/135 (65.19%), Query Frame = 1
Query:   58 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            K KIGINGFGRIGRLV R  +++D VE+VAVNDPFI  DYM YMFKYDS HG++K H +  +  K ++   K    + V   ++P EIPW   GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    3 KPKIGINGFGRIGRLVLRAAVEKDTVEVVAVNDPFINIDYMVYMFKYDSTHGRFKGH-VSAEGGKLIVTNGKTTHQIAVHNSKDPAEIPWGVEGAEYVVESTGVFTHTEKASAHLKGGAKKVIISAPSADAPMFV 136          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PHARH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffia rhodozyma GN=GPD PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.981e-32
Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  +   D+++VA+NDPFI  +YM YMFKYDS HG +K   +++KD K ++ G KP+ V+G R+P  I W   GA+YVVESTGVFT               V+ISAPS DAPMFV
Sbjct:    3 VKVGINGFGRIGRIVLRNAIIHGDIDVVAINDPFIDLEYMVYMFKYDSTHGVFK-GSVEIKDGKLVIEG-KPIVVYGERDPANIQWGAAGADYVVESTGVFTTQEKAELHLKGGAKKVVISAPSADAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 5.084e-32
Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G KP+T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
The following BLAST results are available for this feature:
BLAST of EY728195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
G3P_PONAB4.599e-3354.14Glyceraldehyde-3-phosphate dehydrogenase OS=Pongo ... [more]
G3P_HUMAN6.006e-3353.38Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3P_YARLI7.844e-3355.73Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P_PHACH7.844e-3356.49Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_CANAL1.024e-3255.73Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
G3P_ERYGR1.338e-3256.49Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3P2_AGABI1.338e-3255.73Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_ONCVO1.748e-3255.56Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchoc... [more]
G3P_PHARH2.981e-3253.44Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffi... [more]
G3P_FELCA5.084e-3253.44Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-G01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728195 ID=EY728195; Name=EY728195; organism=Citrus sinensis; type=EST; length=976bp
CGCGGTTCCGGGAATTTCCCGGGGTCGACCCCCGCGTCCGCTCGAGAATC
ATGGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGGC
TGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTT
AATGATCCCTTTATCACAACCGATTACATGACATACATGTTTAAGTACGA
CAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGATA
AGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAAC
CCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTC
GACTGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTG
GTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTT
GTTGGTCGGTGTCAATGAAAAACGAGTACAAACCAGAACTCCAACTTTGT
GGTCCAATGCTAGCTGGCACCACCCACTGCCTTGCTCCCCCCTTGCTAAG
GGCCTTTCTTGACCAGTTTGGGGATTTGTGGAGGTTTGGAAAGAACCCCC
TGTTCCTTCTATTCCTGCGACCCCAAAAAACTGGGGGAAGGGGCCCCTCC
TCACAGGGGATTGGAAGAGGGGGGGCAGGGGCTGCCTTCCTTTCCAACAT
CCTTTCCCTATACAATAATGGGAACCCCCTAAAGGGGTGTTGGAAAAGGC
CTTTGCCTGGCTTTTAAAGGGGAAAAATGAGACGGGTTGGGCTTTCCCGG
GGACCCCAGGGTGGAATTGCCCGGGGGGGTGACCCTCCCAGGGGGAGGGG
GGGGAAAAGAAGGCTCTTTCTTTATGGATAAAAAATTAAAGGCCGCCCCT
ATAGGGGGGGGAGGCAGAAAAGGGGAAAAAAAATAAAGAGGGGAATTTGT
GGGGGAAAAACACCGAGGAGAAAGAA
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