EY728195

Overview
NameEY728195
Unique NameEY728195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_RAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus GN=Gapdh PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 8.673e-32
Identity = 70/131 (53.44%), Postives = 89/131 (67.94%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFSCDKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 8.673e-32
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R  +    VE+VA+NDPFI  +YM YMF+YDS HG++ +  +K ++ K ++ G KP+T+F  R+P  I W E GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.673e-32
Identity = 72/134 (53.73%), Postives = 88/134 (65.67%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVGRC 462
            V +GINGFGRIGR+V R  L    +++VA+NDPFI  +YM YMFKYDSVHG++K   ++ KD K  + G KPV V+G +NP +I W   G +YVVESTGVFT               VIISAPS DAPMFV  C
Sbjct:    2 VNVGINGFGRIGRIVFRNALLNPKIQVVAINDPFINLEYMVYMFKYDSVHGRFK-GTVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGC 133          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.133e-31
Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VKIG+NGFGRIGRLV R     D V++VA+NDPFI  +YM YMFKYDS HG++ H  +K ++ K ++ G+  +T+F  R+P  I W + GAEYVVESTGVFT               V+ISAPS DAPMFV
Sbjct:    2 VKIGVNGFGRIGRLVTRAAFTCDKVQIVAINDPFIDLNYMVYMFKYDSTHGRF-HGTVKAENGKLVINGQ-AITIFQERDPANIKWGDAGAEYVVESTGVFTTTEKASAHLKGGAKRVVISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.133e-31
Identity = 74/130 (56.92%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            KIGINGFGRIGRLV R  L+    ++VAVNDPFI  +YM YMFKYDS HG +K  E+K +D   ++ G+K +TVF    PE IPW++ GAEY+VESTGVFT               VIISAPS DAPMFV
Sbjct:    2 KIGINGFGRIGRLVLRAALEMG-AQVVAVNDPFIALEYMVYMFKYDSTHGMFKG-EVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFV 128          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.932e-31
Identity = 67/129 (51.94%), Postives = 84/129 (65.12%), Query Frame = 1
Query:   67 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            +GINGFGRIGRLV R+ L RDD+ ++A+NDPFI  DY  YMFKYDS HG++K       + K L+   K + VF  R+P  IPW + G +YV++STGVFT               VII+APSKDAPMFV
Sbjct:    5 VGINGFGRIGRLVLRIALSRDDINVIAINDPFIAPDYAAYMFKYDSTHGKFK--GTVTHEGKYLVINGKKIEVFQERDPANIPWGKEGVDYVLDSTGVFTTIEGAQKHIDAGAKKVIITAPSKDAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3PC_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chondrus crispus GN=GAPC PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.523e-31
Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            K+GINGFGRIGRLV R  +++   ++VA+NDPFI  DYM YM KYDS HG++   ++ +KD K  + G   +TVF  R+P EIPWA   A+Y+VE+TGVFT               V+ISAPSKDAPMFV
Sbjct:    5 KVGINGFGRIGRLVLRAAIEKGTCQVVAINDPFIDLDYMAYMLKYDSTHGRYA-GDVSIKDGKLQVDGNS-ITVFAHRDPAEIPWATAAADYIVEATGVFTLKDKAAAHFKGGAKKVVISAPSKDAPMFV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.296e-31
Identity = 72/135 (53.33%), Postives = 88/135 (65.19%), Query Frame = 1
Query:   58 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP---VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            K K+GINGFGRIGRLV R  +++D V++VAVNDPFI  DYM YMFKYDS HG++K   +  +  K ++   K    ++V   ++P EIPW   GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    3 KPKVGINGFGRIGRLVLRAAVEKDTVDVVAVNDPFINIDYMVYMFKYDSTHGRFK-GSVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFV 136          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 3.296e-31
Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            +K+GINGFGRIGR+V R  ++  D+E+VAVNDPFI T Y  YM KYDS HG +K  E++V D K L+   K V  +  RNP +I W+ETGAEYVVESTGVFT               VIISAPS DAPM+V
Sbjct:    4 IKVGINGFGRIGRIVFRNAVEHPDIEVVAVNDPFIETTYAAYMLKYDSSHGLFK-GEVEV-DGKDLVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPSADAPMYV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.304e-31
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            V +GINGFGRIGR+V R  L+   V++VA+NDPFI  DYM YMFKYDSVHG++K   ++ KD K ++ G KP+ +F  ++P  IPW   GA+YVVESTGVFT               V+ISAPS DAPMFV
Sbjct:    2 VNVGINGFGRIGRIVFRNALEVGGVDVVAINDPFIDLDYMVYMFKYDSVHGRFK-GSIEAKDGKLIVEG-KPIHIFAEKDPANIPWGSVGADYVVESTGVFT-TIDKASAHLKGGEKVVISAPSADAPMFV 129          
The following BLAST results are available for this feature:
BLAST of EY728195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
G3P_RAT8.673e-3253.44Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus... [more]
G3P_MOUSE8.673e-3254.20Glyceraldehyde-3-phosphate dehydrogenase OS=Mus mu... [more]
G3P_LYOSH8.673e-3253.73Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_TRISI1.133e-3153.44Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]
G3P_PANVR1.133e-3156.92Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_PICAN1.932e-3151.94Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3PC_CHOCR2.523e-3152.31Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_BRUMA3.296e-3153.33Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P2_TRIKO3.296e-3155.73Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P_PLESA4.304e-3154.20Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-G01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728195 ID=EY728195; Name=EY728195; organism=Citrus sinensis; type=EST; length=976bp
CGCGGTTCCGGGAATTTCCCGGGGTCGACCCCCGCGTCCGCTCGAGAATC
ATGGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGGC
TGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTT
AATGATCCCTTTATCACAACCGATTACATGACATACATGTTTAAGTACGA
CAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGATA
AGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAAC
CCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTC
GACTGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTG
GTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTT
GTTGGTCGGTGTCAATGAAAAACGAGTACAAACCAGAACTCCAACTTTGT
GGTCCAATGCTAGCTGGCACCACCCACTGCCTTGCTCCCCCCTTGCTAAG
GGCCTTTCTTGACCAGTTTGGGGATTTGTGGAGGTTTGGAAAGAACCCCC
TGTTCCTTCTATTCCTGCGACCCCAAAAAACTGGGGGAAGGGGCCCCTCC
TCACAGGGGATTGGAAGAGGGGGGGCAGGGGCTGCCTTCCTTTCCAACAT
CCTTTCCCTATACAATAATGGGAACCCCCTAAAGGGGTGTTGGAAAAGGC
CTTTGCCTGGCTTTTAAAGGGGAAAAATGAGACGGGTTGGGCTTTCCCGG
GGACCCCAGGGTGGAATTGCCCGGGGGGGTGACCCTCCCAGGGGGAGGGG
GGGGAAAAGAAGGCTCTTTCTTTATGGATAAAAAATTAAAGGCCGCCCCT
ATAGGGGGGGGAGGCAGAAAAGGGGAAAAAAAATAAAGAGGGGAATTTGT
GGGGGAAAAACACCGAGGAGAAAGAA
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