EY728195

Overview
NameEY728195
Unique NameEY728195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.622e-31
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  L   +V +VAVNDPFI  +YM YMFKYDSVHG++K   ++ K  K ++ G K ++VFG ++   IPW+  GAEY+VESTGVFT               VIISAPS DAPM+V
Sbjct:    3 VKVGINGFGRIGRIVLRNALLNPEVNVVAVNDPFIALEYMVYMFKYDSVHGRFK-GTVETKGGKLIVDG-KEISVFGEKDAGAIPWSSVGAEYIVESTGVFTTIEKASAHLKGGAKKVIISAPSADAPMYV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.622e-31
Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            KIGINGFGRIGRLV R  L     ++VAVNDPFI  +YM YMFKYDS HG +K  E+K++D   ++ G+K +TVF    PE IPW++ GAEY+VESTGVFT               V+ISAPS DAPMFV
Sbjct:    2 KIGINGFGRIGRLVLRAALSCG-AQVVAVNDPFIALEYMVYMFKYDSTHGVFKG-EVKMEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVISAPSADAPMFV 128          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 7.342e-31
Identity = 71/131 (54.20%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGRLV R       VE+VA+NDPFI  DYM YMF+YDS HG++K  E+K +  K ++ G   +TV+  R+P  I W + GA YVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGINGFGRIGRLVTRAAFLTKKVEIVAINDPFIDLDYMVYMFQYDSTHGKYK-GEVKAEGGKLVIDGH-AITVYSERDPANIKWGDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 7.342e-31
Identity = 70/131 (53.44%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       VE+VA+NDPFI  +YM YMF+YDS HG++K   +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFTSGKVEVVAINDPFIDLNYMVYMFQYDSTHGKFK-GTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 7.342e-31
Identity = 70/131 (53.44%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R  +    V++VA+NDPFI  +YM YMFKYDS HG +K   +K ++ K ++ G   +T+F  R+P  I WA+ GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFK-GTVKAENGKLVINGH-AITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 9.589e-31
Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       V++VA+NDPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.589e-31
Identity = 69/131 (52.67%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  ++ DDVE+VAVNDPFI T Y  YM KYDS HGQ+K  +++      L    K +  +  R+P  IPW + G +YVVESTGVFT               VIISAPS DAPMFV
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFK-GDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPSADAPMFV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 1.252e-30
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.252e-30
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.252e-30
Identity = 72/131 (54.96%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  D+   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAPS DAPMFV
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFV 131          
The following BLAST results are available for this feature:
BLAST of EY728195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
G3P_LENED5.622e-3154.20Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P_HOMAM5.622e-3156.15Glyceraldehyde-3-phosphate dehydrogenase OS=Homaru... [more]
G3P_DANRE7.342e-3154.20Glyceraldehyde-3-phosphate dehydrogenase OS=Danio ... [more]
G3P_CRIGR7.342e-3153.44Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]
G3P_CHICK7.342e-3153.44Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P_RABIT9.589e-3152.67Glyceraldehyde-3-phosphate dehydrogenase OS=Orycto... [more]
G3P_PARBA9.589e-3152.67Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_SPECI1.252e-3051.91Glyceraldehyde-3-phosphate dehydrogenase OS=Spermo... [more]
G3P_MUSPF1.252e-3051.91Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel... [more]
G3P_COCIM1.252e-3054.96Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-G01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728195 ID=EY728195; Name=EY728195; organism=Citrus sinensis; type=EST; length=976bp
CGCGGTTCCGGGAATTTCCCGGGGTCGACCCCCGCGTCCGCTCGAGAATC
ATGGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGGC
TGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTT
AATGATCCCTTTATCACAACCGATTACATGACATACATGTTTAAGTACGA
CAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGATA
AGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAAC
CCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTC
GACTGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTG
GTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTT
GTTGGTCGGTGTCAATGAAAAACGAGTACAAACCAGAACTCCAACTTTGT
GGTCCAATGCTAGCTGGCACCACCCACTGCCTTGCTCCCCCCTTGCTAAG
GGCCTTTCTTGACCAGTTTGGGGATTTGTGGAGGTTTGGAAAGAACCCCC
TGTTCCTTCTATTCCTGCGACCCCAAAAAACTGGGGGAAGGGGCCCCTCC
TCACAGGGGATTGGAAGAGGGGGGGCAGGGGCTGCCTTCCTTTCCAACAT
CCTTTCCCTATACAATAATGGGAACCCCCTAAAGGGGTGTTGGAAAAGGC
CTTTGCCTGGCTTTTAAAGGGGAAAAATGAGACGGGTTGGGCTTTCCCGG
GGACCCCAGGGTGGAATTGCCCGGGGGGGTGACCCTCCCAGGGGGAGGGG
GGGGAAAAGAAGGCTCTTTCTTTATGGATAAAAAATTAAAGGCCGCCCCT
ATAGGGGGGGGAGGCAGAAAAGGGGAAAAAAAATAAAGAGGGGAATTTGT
GGGGGAAAAACACCGAGGAGAAAGAA
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